RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 ZFP14Q9HCL3 533 aa1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 ADAP2Q9NPF8 381 aa1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 NPTNQ9Y639 398 aa1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 ARHGAP21Q5T5U3 1957 aa1.92□□□□□ -2.1
ECHDC1-213ENST00000474240 NFASCO94856 1347 aa1.91□□□□□ -2.1
ECHDC1-213ENST00000474240 SPRR5A0A1B0GTR4 108 aa1.91□□□□□ -2.1
ECHDC1-213ENST00000474240 PLAC8L1A1L4L8 177 aa1.91□□□□□ -2.1
ECHDC1-213ENST00000474240 TCP11X1B4DZS4 312 aa1.91□□□□□ -2.1
ECHDC1-213ENST00000474240 GPR89AB7ZAQ6 455 aa1.91□□□□□ -2.1
ECHDC1-213ENST00000474240 TIMM8AO60220 97 aaPredicted RBP1.91□□□□□ -2.1
ECHDC1-213ENST00000474240 MTX2O75431 263 aa1.91□□□□□ -2.1
ECHDC1-213ENST00000474240 OR7A10O76100 309 aa1.91□□□□□ -2.1
ECHDC1-213ENST00000474240 SLC25A14O95258 325 aaPredicted RBP1.91□□□□□ -2.1
ECHDC1-213ENST00000474240 IGLV2-23P01705 113 aa1.91□□□□□ -2.1
ECHDC1-213ENST00000474240 RETP07949 1114 aa1.91□□□□□ -2.1
ECHDC1-213ENST00000474240 MRPL3P09001 348 aaKnown RBP1.91□□□□□ -2.1
ECHDC1-213ENST00000474240 GPR89BP0CG08 455 aa1.91□□□□□ -2.1
ECHDC1-213ENST00000474240 ZNF30P17039 623 aa1.91□□□□□ -2.1
ECHDC1-213ENST00000474240 PMELP40967 661 aa1.91□□□□□ -2.1
ECHDC1-213ENST00000474240 CYB561P49447 251 aa1.91□□□□□ -2.1
ECHDC1-213ENST00000474240 AQP6Q13520 282 aa1.91□□□□□ -2.1
ECHDC1-213ENST00000474240 FAM83EQ2M2I3 478 aa1.91□□□□□ -2.1
ECHDC1-213ENST00000474240 PMF1Q6P1K2 205 aa1.91□□□□□ -2.1
ECHDC1-213ENST00000474240 CCDC73Q6ZRK6 1079 aa1.91□□□□□ -2.1
ECHDC1-213ENST00000474240 RUFY3Q7L099 469 aa1.91□□□□□ -2.1
ECHDC1-213ENST00000474240 BHLHA15Q7RTS1 189 aaPredicted RBP1.91□□□□□ -2.1
ECHDC1-213ENST00000474240 ABHD12BQ7Z5M8 362 aaPredicted RBP1.91□□□□□ -2.1
ECHDC1-213ENST00000474240 ZNF561Q8N587 486 aa1.91□□□□□ -2.1
ECHDC1-213ENST00000474240 TPRX1Q8N7U7 411 aa1.91□□□□□ -2.1
ECHDC1-213ENST00000474240 CEP112Q8N8E3 955 aa1.91□□□□□ -2.1
ECHDC1-213ENST00000474240 OR10G2Q8NGC3 310 aa1.91□□□□□ -2.1
ECHDC1-213ENST00000474240 ZFP90Q8TF47 636 aa1.91□□□□□ -2.1
ECHDC1-213ENST00000474240 SCFD1Q8WVM8 642 aa1.91□□□□□ -2.1
ECHDC1-213ENST00000474240 PIBF1Q8WXW3 757 aa1.91□□□□□ -2.1
ECHDC1-213ENST00000474240 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.91□□□□□ -2.1
ECHDC1-213ENST00000474240 DNAJC19Q96DA6 116 aa1.91□□□□□ -2.1
ECHDC1-213ENST00000474240 LINC00477Q96M19 166 aa1.91□□□□□ -2.1
ECHDC1-213ENST00000474240 OR8B4Q96RC9 309 aa1.91□□□□□ -2.1
ECHDC1-213ENST00000474240 FAIM2Q9BWQ8 316 aa1.91□□□□□ -2.1
ECHDC1-213ENST00000474240 SCRT1Q9BWW7 348 aa1.91□□□□□ -2.1
ECHDC1-213ENST00000474240 PPA2Q9H2U2 334 aa1.91□□□□□ -2.1
ECHDC1-213ENST00000474240 ANKRD19PQ9H560 264 aa1.91□□□□□ -2.1
ECHDC1-213ENST00000474240 LRRC40Q9H9A6 602 aa1.91□□□□□ -2.1
ECHDC1-213ENST00000474240 NOX3Q9HBY0 568 aa1.91□□□□□ -2.1
ECHDC1-213ENST00000474240 ISYNA1Q9NPH2 558 aa1.91□□□□□ -2.1
ECHDC1-213ENST00000474240 ETNK2Q9NVF9 386 aa1.91□□□□□ -2.1
ECHDC1-213ENST00000474240 PTBP2Q9UKA9 531 aaKnown RBP1.91□□□□□ -2.1
ECHDC1-213ENST00000474240 CDHR2Q9BYE9 1310 aa1.91□□□□□ -2.1
ECHDC1-213ENST00000474240 IGHV5-51A0A0C4DH38 117 aa1.9□□□□□ -2.11
ECHDC1-213ENST00000474240 A0A1W2PP18 115 aa1.9□□□□□ -2.11
ECHDC1-213ENST00000474240 INS-IGF2F8WCM5 200 aa1.9□□□□□ -2.11
ECHDC1-213ENST00000474240 CPLX1O14810 134 aa1.9□□□□□ -2.11
ECHDC1-213ENST00000474240 VAMP5O95183 116 aa1.9□□□□□ -2.11
ECHDC1-213ENST00000474240 IGHV2-5P01817 119 aa1.9□□□□□ -2.11
ECHDC1-213ENST00000474240 CNR1P21554 472 aa1.9□□□□□ -2.11
ECHDC1-213ENST00000474240 AK4P27144 223 aaPredicted RBP1.9□□□□□ -2.11
ECHDC1-213ENST00000474240 BTCP35070 178 aa1.9□□□□□ -2.11
ECHDC1-213ENST00000474240 NAMPTP43490 491 aa1.9□□□□□ -2.11
ECHDC1-213ENST00000474240 GBX2P52951 348 aaPredicted RBP1.9□□□□□ -2.11
ECHDC1-213ENST00000474240 FBXW4P57775 412 aa1.9□□□□□ -2.11
ECHDC1-213ENST00000474240 RPL23AP62750 156 aaKnown RBP1.9□□□□□ -2.11
ECHDC1-213ENST00000474240 CNIH2Q6PI25 160 aa1.9□□□□□ -2.11
ECHDC1-213ENST00000474240 FAM92BQ6ZTR7 304 aa1.9□□□□□ -2.11
ECHDC1-213ENST00000474240 STRADAQ7RTN6 431 aa1.9□□□□□ -2.11
ECHDC1-213ENST00000474240 UBALD2Q8IYN6 164 aa1.9□□□□□ -2.11
ECHDC1-213ENST00000474240 FAM86B1Q8N7N1 296 aa1.9□□□□□ -2.11
ECHDC1-213ENST00000474240 BHLHE23Q8NDY6 225 aa1.9□□□□□ -2.11
ECHDC1-213ENST00000474240 OR2G2Q8NGZ5 317 aa1.9□□□□□ -2.11
ECHDC1-213ENST00000474240 KIR2DL5BQ8NHK3 375 aa1.9□□□□□ -2.11
ECHDC1-213ENST00000474240 FRZBQ92765 325 aa1.9□□□□□ -2.11
ECHDC1-213ENST00000474240 SGK3Q96BR1 496 aa1.9□□□□□ -2.11
ECHDC1-213ENST00000474240 OR2A5Q96R48 311 aa1.9□□□□□ -2.11
ECHDC1-213ENST00000474240 TRIM62Q9BVG3 475 aa1.9□□□□□ -2.11
ECHDC1-213ENST00000474240 RSPO3Q9BXY4 272 aaPredicted RBP1.9□□□□□ -2.11
ECHDC1-213ENST00000474240 NT5C3AQ9H0P0 336 aa1.9□□□□□ -2.11
ECHDC1-213ENST00000474240 VCX2Q9H322 139 aa1.9□□□□□ -2.11
ECHDC1-213ENST00000474240 SLC40A1Q9NP59 571 aa1.9□□□□□ -2.11
ECHDC1-213ENST00000474240 FAM49BQ9NUQ9 324 aa1.9□□□□□ -2.11
ECHDC1-213ENST00000474240 TMEM14AQ9Y6G1 99 aa1.9□□□□□ -2.11
ECHDC1-213ENST00000474240 CENPJQ9HC77 1338 aaPredicted RBP1.9□□□□□ -2.11
ECHDC1-213ENST00000474240 ARID1AO14497 2285 aa1.89□□□□□ -2.11
ECHDC1-213ENST00000474240 ATP10AO60312 1499 aa1.89□□□□□ -2.11
ECHDC1-213ENST00000474240 A0A0U1RQS6 177 aa1.89□□□□□ -2.11
ECHDC1-213ENST00000474240 A0A1B0GVI7 797 aa1.89□□□□□ -2.11
ECHDC1-213ENST00000474240 CCL21O00585 134 aa1.89□□□□□ -2.11
ECHDC1-213ENST00000474240 CD5LO43866 347 aa1.89□□□□□ -2.11
ECHDC1-213ENST00000474240 EIF3GO75821 320 aaKnown RBP eCLIP1.89□□□□□ -2.11
ECHDC1-213ENST00000474240 IFNA8P32881 189 aa1.89□□□□□ -2.11
ECHDC1-213ENST00000474240 ATP5C1P36542 298 aaKnown RBP1.89□□□□□ -2.11
ECHDC1-213ENST00000474240 ARG2P78540 354 aa1.89□□□□□ -2.11
ECHDC1-213ENST00000474240 SLC7A9P82251 487 aa1.89□□□□□ -2.11
ECHDC1-213ENST00000474240 ZNF92Q03936 586 aa1.89□□□□□ -2.11
ECHDC1-213ENST00000474240 IL24Q13007 206 aa1.89□□□□□ -2.11
ECHDC1-213ENST00000474240 ERCC8Q13216 396 aa1.89□□□□□ -2.11
ECHDC1-213ENST00000474240 GINS1Q14691 196 aa1.89□□□□□ -2.11
ECHDC1-213ENST00000474240 ZNF77Q15935 545 aa1.89□□□□□ -2.11
ECHDC1-213ENST00000474240 C6orf226Q5I0X4 101 aa1.89□□□□□ -2.11
ECHDC1-213ENST00000474240 LY6G6FQ5SQ64 297 aa1.89□□□□□ -2.11
ECHDC1-213ENST00000474240 SLC25A48Q6ZT89 311 aaKnown RBP1.89□□□□□ -2.11
ECHDC1-213ENST00000474240 DHDDSQ86SQ9 333 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 161.6 ms