RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 SEZ6L2Q6UXD5 910 aa9.13□□□□□ -0.95
CASC3-204ENST00000474190 HIST3H2AQ7L7L0 130 aa9.13□□□□□ -0.95
CASC3-204ENST00000474190 AAED1Q7RTV5 226 aa9.13□□□□□ -0.95
CASC3-204ENST00000474190 MRGPRGQ86SM5 289 aa9.13□□□□□ -0.95
CASC3-204ENST00000474190 GTF2IRD2Q86UP8 949 aa9.13□□□□□ -0.95
CASC3-204ENST00000474190 CDK20Q8IZL9 346 aa9.13□□□□□ -0.95
CASC3-204ENST00000474190 CNEP1R1Q8N9A8 125 aa9.13□□□□□ -0.95
CASC3-204ENST00000474190 ATG16L2Q8NAA4 619 aa9.13□□□□□ -0.95
CASC3-204ENST00000474190 HIST1H2ACQ93077 130 aa9.13□□□□□ -0.95
CASC3-204ENST00000474190 SLC25A44Q96H78 314 aaPredicted RBP9.13□□□□□ -0.95
CASC3-204ENST00000474190 BOD1Q96IK1 185 aa9.13□□□□□ -0.95
CASC3-204ENST00000474190 LRR1Q96L50 414 aa9.13□□□□□ -0.95
CASC3-204ENST00000474190 TACO1Q9BSH4 297 aaKnown RBP9.13□□□□□ -0.95
CASC3-204ENST00000474190 TSSK6Q9BXA6 273 aa9.13□□□□□ -0.95
CASC3-204ENST00000474190 HCAR1Q9BXC0 346 aa9.13□□□□□ -0.95
CASC3-204ENST00000474190 LINC00470Q9BZP3 86 aa9.13□□□□□ -0.95
CASC3-204ENST00000474190 NMNAT2Q9BZQ4 307 aa9.13□□□□□ -0.95
CASC3-204ENST00000474190 GRIP2Q9C0E4 1043 aa9.13□□□□□ -0.95
CASC3-204ENST00000474190 SLC25A19Q9HC21 320 aa9.13□□□□□ -0.95
CASC3-204ENST00000474190 PAPOLBQ9NRJ5 636 aaKnown RBP9.13□□□□□ -0.95
CASC3-204ENST00000474190 VSX1Q9NZR4 365 aaPredicted RBP9.13□□□□□ -0.95
CASC3-204ENST00000474190 EMC3Q9P0I2 261 aa9.13□□□□□ -0.95
CASC3-204ENST00000474190 EMC9Q9Y3B6 208 aa9.13□□□□□ -0.95
CASC3-204ENST00000474190 UGT2A1Q9Y4X1 527 aa9.13□□□□□ -0.95
CASC3-204ENST00000474190 PHF3Q92576 2039 aaKnown RBP9.13□□□□□ -0.95
CASC3-204ENST00000474190 FREM1Q5H8C1 2179 aa9.13□□□□□ -0.95
CASC3-204ENST00000474190 SLC22A23A1A5C7 686 aa9.12□□□□□ -0.95
CASC3-204ENST00000474190 H7C1C5 153 aa9.12□□□□□ -0.95
CASC3-204ENST00000474190 M0R129 80 aa9.12□□□□□ -0.95
CASC3-204ENST00000474190 MRPL33O75394 65 aaKnown RBP9.12□□□□□ -0.95
CASC3-204ENST00000474190 SNAP29O95721 258 aa9.12□□□□□ -0.95
CASC3-204ENST00000474190 BCL10O95999 233 aa9.12□□□□□ -0.95
CASC3-204ENST00000474190 ACADSP16219 412 aa9.12□□□□□ -0.95
CASC3-204ENST00000474190 IGFBP5P24593 272 aa9.12□□□□□ -0.95
CASC3-204ENST00000474190 GTF2E2P29084 291 aaKnown RBP9.12□□□□□ -0.95
CASC3-204ENST00000474190 NOS3P29474 1203 aa9.12□□□□□ -0.95
CASC3-204ENST00000474190 SDHAP31040 664 aa9.12□□□□□ -0.95
CASC3-204ENST00000474190 PCYT1AP49585 367 aa9.12□□□□□ -0.95
CASC3-204ENST00000474190 PER3P56645 1201 aa9.12□□□□□ -0.95
CASC3-204ENST00000474190 LCN6P62502 163 aa9.12□□□□□ -0.95
CASC3-204ENST00000474190 FMODQ06828 376 aa9.12□□□□□ -0.95
CASC3-204ENST00000474190 FAM27E3Q08E93 113 aa9.12□□□□□ -0.95
CASC3-204ENST00000474190 TOP3AQ13472 1001 aaPredicted RBP9.12□□□□□ -0.95
CASC3-204ENST00000474190 C1DQ13901 141 aaKnown RBP9.12□□□□□ -0.95
CASC3-204ENST00000474190 GINS1Q14691 196 aa9.12□□□□□ -0.95
CASC3-204ENST00000474190 PTGES3Q15185 160 aaKnown RBP9.12□□□□□ -0.95
CASC3-204ENST00000474190 TRIP10Q15642 601 aa9.12□□□□□ -0.95
CASC3-204ENST00000474190 PGGHGQ32M88 737 aa9.12□□□□□ -0.95
CASC3-204ENST00000474190 SLC25A35Q3KQZ1 300 aa9.12□□□□□ -0.95
CASC3-204ENST00000474190 TMEM201Q5SNT2 666 aa9.12□□□□□ -0.95
CASC3-204ENST00000474190 CARD17Q5XLA6 110 aa9.12□□□□□ -0.95
CASC3-204ENST00000474190 FBXW9Q5XUX1 488 aa9.12□□□□□ -0.95
CASC3-204ENST00000474190 C12orf73Q69YU5 71 aa9.12□□□□□ -0.95
CASC3-204ENST00000474190 SLC25A47Q6Q0C1 308 aa9.12□□□□□ -0.95
CASC3-204ENST00000474190 CASP12Q6UXS9 341 aa9.12□□□□□ -0.95
CASC3-204ENST00000474190 STAC2Q6ZMT1 411 aa9.12□□□□□ -0.95
CASC3-204ENST00000474190 ZBTB49Q6ZSB9 765 aa9.12□□□□□ -0.95
CASC3-204ENST00000474190 Q6ZT83 130 aa9.12□□□□□ -0.95
CASC3-204ENST00000474190 ZNF808Q8N4W9 903 aaPredicted RBP9.12□□□□□ -0.95
CASC3-204ENST00000474190 MAGEE2Q8TD90 523 aaPredicted RBP9.12□□□□□ -0.95
CASC3-204ENST00000474190 DNAJC9Q8WXX5 260 aa9.12□□□□□ -0.95
CASC3-204ENST00000474190 PTP4A1Q93096 173 aa9.12□□□□□ -0.95
CASC3-204ENST00000474190 RBM4BQ9BQ04 359 aaKnown RBP9.12□□□□□ -0.95
CASC3-204ENST00000474190 RBM4Q9BWF3 364 aaKnown RBP9.12□□□□□ -0.95
CASC3-204ENST00000474190 POLDIP3Q9BY77 421 aaKnown RBP9.12□□□□□ -0.95
CASC3-204ENST00000474190 SLCO5A1Q9H2Y9 848 aa9.12□□□□□ -0.95
CASC3-204ENST00000474190 PIGMQ9H3S5 423 aa9.12□□□□□ -0.95
CASC3-204ENST00000474190 KRCC1Q9NPI7 259 aaPredicted RBP9.12□□□□□ -0.95
CASC3-204ENST00000474190 ZNF224Q9NZL3 707 aa9.12□□□□□ -0.95
CASC3-204ENST00000474190 POFUT2Q9Y2G5 429 aa9.12□□□□□ -0.95
CASC3-204ENST00000474190 CSMD1Q96PZ7 3565 aa9.12□□□□□ -0.95
CASC3-204ENST00000474190 CENPEQ02224 2701 aa9.12□□□□□ -0.95
CASC3-204ENST00000474190 ANKHD1Q8IWZ3 2542 aaKnown RBP9.11□□□□□ -0.95
CASC3-204ENST00000474190 DCHS2Q6V1P9 2916 aa9.11□□□□□ -0.95
CASC3-204ENST00000474190 IGLV1-36A0A0B4J1U3 117 aa9.11□□□□□ -0.95
CASC3-204ENST00000474190 PRSS37A4D1T9 235 aa9.11□□□□□ -0.95
CASC3-204ENST00000474190 OR6C68A6NDL8 312 aa9.11□□□□□ -0.95
CASC3-204ENST00000474190 ZNF503-AS2A6NEH8 195 aa9.11□□□□□ -0.95
CASC3-204ENST00000474190 FAM90A27PA6NNH2 459 aa9.11□□□□□ -0.95
CASC3-204ENST00000474190 OR6A2O95222 327 aa9.11□□□□□ -0.95
CASC3-204ENST00000474190 CNOT4O95628 575 aaKnown RBP9.11□□□□□ -0.95
CASC3-204ENST00000474190 PSKH1P11801 424 aa9.11□□□□□ -0.95
CASC3-204ENST00000474190 CTLA4P16410 223 aa9.11□□□□□ -0.95
CASC3-204ENST00000474190 SLC6A6P31641 620 aa9.11□□□□□ -0.95
CASC3-204ENST00000474190 ACVR1BP36896 505 aa9.11□□□□□ -0.95
CASC3-204ENST00000474190 DAP3P51398 398 aaKnown RBP9.11□□□□□ -0.95
CASC3-204ENST00000474190 ESRRGP62508 458 aa9.11□□□□□ -0.95
CASC3-204ENST00000474190 NPRL3Q12980 569 aa9.11□□□□□ -0.95
CASC3-204ENST00000474190 KRR1Q13601 381 aaKnown RBP9.11□□□□□ -0.95
CASC3-204ENST00000474190 TAF11Q15544 211 aa9.11□□□□□ -0.95
CASC3-204ENST00000474190 TSC22D1Q15714 1073 aa9.11□□□□□ -0.95
CASC3-204ENST00000474190 ETFDHQ16134 617 aa9.11□□□□□ -0.95
CASC3-204ENST00000474190 LRRC36Q1X8D7 754 aa9.11□□□□□ -0.95
CASC3-204ENST00000474190 SLC35F1Q5T1Q4 408 aa9.11□□□□□ -0.95
CASC3-204ENST00000474190 SLX4IPQ5VYV7 408 aa9.11□□□□□ -0.95
CASC3-204ENST00000474190 FBXW10Q5XX13 1052 aa9.11□□□□□ -0.95
CASC3-204ENST00000474190 GPR139Q6DWJ6 353 aa9.11□□□□□ -0.95
CASC3-204ENST00000474190 MTFR2Q6P444 385 aa9.11□□□□□ -0.95
CASC3-204ENST00000474190 FOXL2NBQ6ZUU3 175 aa9.11□□□□□ -0.95
CASC3-204ENST00000474190 ZNF627Q7L945 461 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms