RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 VSX1Q9NZR4 365 aaPredicted RBP16.14■□□□□ 0.17
VARS2-206ENST00000473916 IGLV1-36A0A0B4J1U3 117 aa16.14■□□□□ 0.17
VARS2-206ENST00000473916 PLPP2O43688 288 aa16.14■□□□□ 0.17
VARS2-206ENST00000473916 HLA-DPB1P04440 258 aa16.14■□□□□ 0.17
VARS2-206ENST00000473916 CENPAP49450 140 aa16.14■□□□□ 0.17
VARS2-206ENST00000473916 OR2B6P58173 313 aa16.14■□□□□ 0.17
VARS2-206ENST00000473916 HSF1Q00613 529 aa16.14■□□□□ 0.17
VARS2-206ENST00000473916 SELENBP1Q13228 472 aa16.14■□□□□ 0.17
VARS2-206ENST00000473916 ZNF846Q147U1 533 aa16.14■□□□□ 0.17
VARS2-206ENST00000473916 MFSD13AQ14CX5 517 aa16.14■□□□□ 0.17
VARS2-206ENST00000473916 MEP1BQ16820 701 aa16.14■□□□□ 0.17
VARS2-206ENST00000473916 RAET1LQ5VY80 246 aa16.14■□□□□ 0.17
VARS2-206ENST00000473916 DMKNQ6E0U4 476 aaPredicted RBP16.14■□□□□ 0.17
VARS2-206ENST00000473916 SLC35D2Q76EJ3 337 aa16.14■□□□□ 0.17
VARS2-206ENST00000473916 DPY19L4Q7Z388 723 aa16.14■□□□□ 0.17
VARS2-206ENST00000473916 CDC20BQ86Y33 519 aa16.14■□□□□ 0.17
VARS2-206ENST00000473916 DND1Q8IYX4 353 aaKnown RBP16.14■□□□□ 0.17
VARS2-206ENST00000473916 GTPBP8Q8N3Z3 284 aaPredicted RBP16.14■□□□□ 0.17
VARS2-206ENST00000473916 IL22RA1Q8N6P7 574 aa16.14■□□□□ 0.17
VARS2-206ENST00000473916 SLC25A46Q96AG3 418 aa16.14■□□□□ 0.17
VARS2-206ENST00000473916 ZBTB8AQ96BR9 441 aa16.14■□□□□ 0.17
VARS2-206ENST00000473916 SGCZQ96LD1 299 aa16.14■□□□□ 0.17
VARS2-206ENST00000473916 AMELYQ99218 206 aa16.14■□□□□ 0.17
VARS2-206ENST00000473916 HMG20AQ9NP66 347 aa16.14■□□□□ 0.17
VARS2-206ENST00000473916 DKKL1Q9UK85 242 aa16.14■□□□□ 0.17
VARS2-206ENST00000473916 PCDHGB7Q9Y5F8 929 aa16.14■□□□□ 0.17
VARS2-206ENST00000473916 IGKV1D-43A0A0B4J1Z2 117 aa16.13■□□□□ 0.17
VARS2-206ENST00000473916 PINLYPA6NC86 204 aa16.13■□□□□ 0.17
VARS2-206ENST00000473916 NPIPA5E9PKD4 350 aa16.13■□□□□ 0.17
VARS2-206ENST00000473916 TRIM3O75382 744 aaPredicted RBP16.13■□□□□ 0.17
VARS2-206ENST00000473916 RGS9O75916 674 aaPredicted RBP16.13■□□□□ 0.17
VARS2-206ENST00000473916 MPZL1O95297 269 aa16.13■□□□□ 0.17
VARS2-206ENST00000473916 RFPL3SP0C7P2 107 aa16.13■□□□□ 0.17
VARS2-206ENST00000473916 OR8G3PP0DMU2 310 aa16.13■□□□□ 0.17
VARS2-206ENST00000473916 EIF1P41567 113 aaKnown RBP16.13■□□□□ 0.17
VARS2-206ENST00000473916 ACTA2P62736 377 aa16.13■□□□□ 0.17
VARS2-206ENST00000473916 ACTG2P63267 376 aa16.13■□□□□ 0.17
VARS2-206ENST00000473916 OC90Q02509 493 aaPredicted RBP16.13■□□□□ 0.17
VARS2-206ENST00000473916 DCAF10Q5QP82 559 aa16.13■□□□□ 0.17
VARS2-206ENST00000473916 ZNF684Q5T5D7 378 aa16.13■□□□□ 0.17
VARS2-206ENST00000473916 C16orf87Q6PH81 154 aa16.13■□□□□ 0.17
VARS2-206ENST00000473916 LRRC69Q6ZNQ3 347 aa16.13■□□□□ 0.17
VARS2-206ENST00000473916 SYS1Q8N2H4 156 aa16.13■□□□□ 0.17
VARS2-206ENST00000473916 HSD17B8Q92506 261 aa16.13■□□□□ 0.17
VARS2-206ENST00000473916 LRFN3Q9BTN0 628 aa16.13■□□□□ 0.17
VARS2-206ENST00000473916 MRPL22Q9NWU5 206 aaKnown RBP16.13■□□□□ 0.17
VARS2-206ENST00000473916 STMN3Q9NZ72 180 aa16.13■□□□□ 0.17
VARS2-206ENST00000473916 NPIPA1Q9UND3 350 aa16.13■□□□□ 0.17
VARS2-206ENST00000473916 A3GALT2U3KPV4 340 aa16.13■□□□□ 0.17
VARS2-206ENST00000473916 OR2M5A3KFT3 312 aa16.12■□□□□ 0.17
VARS2-206ENST00000473916 IL1AP01583 271 aa16.12■□□□□ 0.17
VARS2-206ENST00000473916 HLA-DQA2P01906 255 aa16.12■□□□□ 0.17
VARS2-206ENST00000473916 P04436 131 aa16.12■□□□□ 0.17
VARS2-206ENST00000473916 RORCP51449 518 aa16.12■□□□□ 0.17
VARS2-206ENST00000473916 MAP2K6P52564 334 aa16.12■□□□□ 0.17
VARS2-206ENST00000473916 DSCR4P56555 118 aaPredicted RBP16.12■□□□□ 0.17
VARS2-206ENST00000473916 IFITM3Q01628 133 aa16.12■□□□□ 0.17
VARS2-206ENST00000473916 SRSF6Q13247 344 aaKnown RBP16.12■□□□□ 0.17
VARS2-206ENST00000473916 GPR50Q13585 617 aa16.12■□□□□ 0.17
VARS2-206ENST00000473916 TOMM20Q15388 145 aa16.12■□□□□ 0.17
VARS2-206ENST00000473916 SPINK14Q6IE38 97 aa16.12■□□□□ 0.17
VARS2-206ENST00000473916 LINC00299Q6ZSB3 139 aa16.12■□□□□ 0.17
VARS2-206ENST00000473916 RAB43Q86YS6 212 aa16.12■□□□□ 0.17
VARS2-206ENST00000473916 ZNF248Q8NDW4 579 aa16.12■□□□□ 0.17
VARS2-206ENST00000473916 NEIL3Q8TAT5 605 aa16.12■□□□□ 0.17
VARS2-206ENST00000473916 GHSRQ92847 366 aa16.12■□□□□ 0.17
VARS2-206ENST00000473916 TMEM41AQ96HV5 264 aa16.12■□□□□ 0.17
VARS2-206ENST00000473916 WDR12Q9GZL7 423 aaKnown RBP16.12■□□□□ 0.17
VARS2-206ENST00000473916 SMURF1Q9HCE7 757 aa16.12■□□□□ 0.17
VARS2-206ENST00000473916 PLEKHB1Q9UF11 243 aaPredicted RBP16.12■□□□□ 0.17
VARS2-206ENST00000473916 MRM2Q9UI43 246 aaKnown RBP16.12■□□□□ 0.17
VARS2-206ENST00000473916 KCNG2Q9UJ96 466 aa16.12■□□□□ 0.17
VARS2-206ENST00000473916 B3GALT5Q9Y2C3 310 aa16.12■□□□□ 0.17
VARS2-206ENST00000473916 CFAP47Q6ZTR5 3102 aa16.12■□□□□ 0.17
VARS2-206ENST00000473916 ANKRD33BA6NCL7 494 aa16.12■□□□□ 0.17
VARS2-206ENST00000473916 LRRC3CA6NJW4 275 aa16.12■□□□□ 0.17
VARS2-206ENST00000473916 ADH6P28332 368 aa16.12■□□□□ 0.17
VARS2-206ENST00000473916 CDK5R1Q15078 307 aa16.12■□□□□ 0.17
VARS2-206ENST00000473916 NHLRC1Q6VVB1 395 aa16.12■□□□□ 0.17
VARS2-206ENST00000473916 GPAT4Q86UL3 456 aa16.12■□□□□ 0.17
VARS2-206ENST00000473916 S100ZQ8WXG8 99 aa16.12■□□□□ 0.17
VARS2-206ENST00000473916 ADAD1Q96M93 576 aaKnown RBP16.12■□□□□ 0.17
VARS2-206ENST00000473916 INTS14Q96SY0 518 aa16.12■□□□□ 0.17
VARS2-206ENST00000473916 SMAD5Q99717 465 aaKnown RBP16.12■□□□□ 0.17
VARS2-206ENST00000473916 PDCD1LG2Q9BQ51 273 aa16.12■□□□□ 0.17
VARS2-206ENST00000473916 GSTK1Q9Y2Q3 226 aa16.12■□□□□ 0.17
VARS2-206ENST00000473916 FKBP7Q9Y680 259 aa16.12■□□□□ 0.17
VARS2-206ENST00000473916 A0A087WZY1 265 aa16.11■□□□□ 0.17
VARS2-206ENST00000473916 A0A1W2PNV4 684 aa16.11■□□□□ 0.17
VARS2-206ENST00000473916 H0YC42 278 aa16.11■□□□□ 0.17
VARS2-206ENST00000473916 FZD7O75084 574 aa16.11■□□□□ 0.17
VARS2-206ENST00000473916 RPP14O95059 124 aaKnown RBP16.11■□□□□ 0.17
VARS2-206ENST00000473916 CYB561P49447 251 aa16.11■□□□□ 0.17
VARS2-206ENST00000473916 BIDP55957 195 aa16.11■□□□□ 0.17
VARS2-206ENST00000473916 NANOS3P60323 173 aaKnown RBP16.11■□□□□ 0.17
VARS2-206ENST00000473916 SIRPAP78324 504 aa16.11■□□□□ 0.17
VARS2-206ENST00000473916 PXKQ7Z7A4 578 aa16.11■□□□□ 0.17
VARS2-206ENST00000473916 YRDCQ86U90 279 aaKnown RBP16.11■□□□□ 0.17
VARS2-206ENST00000473916 NR2C2APQ86WQ0 139 aa16.11■□□□□ 0.17
VARS2-206ENST00000473916 SIGLEC12Q96PQ1 595 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms