RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 SAP18O00422 153 aaKnown RBP1.2□□□□□ -2.22
CCDC39-203ENST00000473854 RTCAO00442 366 aaKnown RBP1.2□□□□□ -2.22
CCDC39-203ENST00000473854 UBE2CO00762 179 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 SLC9A3R1O14745 358 aaPredicted RBP1.2□□□□□ -2.22
CCDC39-203ENST00000473854 FPGTO14772 594 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 ANGPT2O15123 496 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 SCAMP2O15127 329 aaKnown RBP1.2□□□□□ -2.22
CCDC39-203ENST00000473854 ACOX3O15254 700 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 P2RX6O15547 441 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 TPST1O60507 370 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 B4GALT2O60909 372 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 SCN2BO60939 215 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 FKBP6O75344 327 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 CRCPO75575 148 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 STK16O75716 305 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 OR6B1O95007 311 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 LRATO95237 230 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 CLDN9O95484 217 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 C1orf105O95561 183 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 FGF19O95750 216 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 BAG2O95816 211 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 SLC16A8O95907 504 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 OTCP00480 354 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 FTH1P02794 183 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 STATHP02808 62 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 MT-ND1P03886 318 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 DNTTP04053 509 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 GBAP04062 536 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 SEMG1P04279 462 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 APODP05090 189 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 C8GP07360 202 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 ANXA5P08758 320 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 RPSAP08865 295 aaKnown RBP1.2□□□□□ -2.22
CCDC39-203ENST00000473854 OR56A5P0C7T3 313 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 THRAP10827 490 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 HSD17B1P14061 328 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 ATP1B2P14415 290 aaPredicted RBP1.2□□□□□ -2.22
CCDC39-203ENST00000473854 IDO1P14902 403 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 EZRP15311 586 aaKnown RBP1.2□□□□□ -2.22
CCDC39-203ENST00000473854 ZNF30P17039 623 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 VCLP18206 1134 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 NELFEP18615 380 aaKnown RBP1.2□□□□□ -2.22
CCDC39-203ENST00000473854 GGT1P19440 569 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 ME2P23368 584 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 PSMB5P28074 263 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 HMOX2P30519 316 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 PKLRP30613 574 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 GDI1P31150 447 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 SHMT2P34897 504 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 PTGER4P35408 488 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 GCKP35557 465 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 KRT20P35900 424 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 GPR1P46091 355 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 ACADVLP49748 655 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 KHKP50053 298 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 GZMMP51124 257 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 POLR2JP52435 117 aaKnown RBP1.2□□□□□ -2.22
CCDC39-203ENST00000473854 MAPK12P53778 367 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 IST1P53990 364 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 AP1S2P56377 157 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 STX1BP61266 288 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 ST8SIA6P61647 398 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 PPP1CAP62136 330 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 MYBPC1Q00872 1141 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 EMX2Q04743 252 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 LIPEQ05469 1076 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 HSPA14Q0VDF9 509 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 FUT5Q11128 374 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 ILF2Q12905 390 aaKnown RBP1.2□□□□□ -2.22
CCDC39-203ENST00000473854 PPP1R8Q12972 351 aaKnown RBP1.2□□□□□ -2.22
CCDC39-203ENST00000473854 ABRQ12979 859 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 BNIP2Q12982 314 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 HSPB3Q12988 150 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 CHIT1Q13231 466 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 DDX39BQ13838 428 aaKnown RBP1.2□□□□□ -2.22
CCDC39-203ENST00000473854 SNTB1Q13884 538 aaKnown RBP1.2□□□□□ -2.22
CCDC39-203ENST00000473854 DOC2AQ14183 400 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 C16orf72Q14CZ0 275 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 PDGFRLQ15198 375 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 MAPRE2Q15555 327 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 MLF2Q15773 248 aaPredicted RBP1.2□□□□□ -2.22
CCDC39-203ENST00000473854 CST6Q15828 149 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 ATP6AP1Q15904 470 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 EXT1Q16394 746 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 NRF1Q16656 503 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 LRRC36Q1X8D7 754 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 VWC2Q2TAL6 325 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 HKDC1Q2TB90 917 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 WSCD2Q2TBF2 565 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 FAM174BQ3ZCQ3 159 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 TMEM52BQ4KMG9 183 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 ATP6AP1LQ52LC2 224 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 RFTN2Q52LD8 501 aaPredicted RBP1.2□□□□□ -2.22
CCDC39-203ENST00000473854 SYT14P1Q58G82 188 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 COQ5Q5HYK3 327 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 SAMD4BQ5PRF9 694 aaKnown RBP1.2□□□□□ -2.22
CCDC39-203ENST00000473854 LDLRAP1Q5SW96 308 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 C6orf52Q5T4I8 152 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 MFSD4BQ5TF39 518 aa1.2□□□□□ -2.22
CCDC39-203ENST00000473854 LYPLAL1Q5VWZ2 237 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms