RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 OR6N2Q8NGY6 317 aa8.4□□□□□ -1.06
SMC1A-205ENST00000469129 FNDC8Q8TC99 324 aa8.4□□□□□ -1.06
SMC1A-205ENST00000469129 ADAMTS17Q8TE56 1095 aa8.4□□□□□ -1.06
SMC1A-205ENST00000469129 KCNE4Q8WWG9 221 aa8.4□□□□□ -1.06
SMC1A-205ENST00000469129 ASB17Q8WXJ9 295 aa8.4□□□□□ -1.06
SMC1A-205ENST00000469129 SLC25A46Q96AG3 418 aa8.4□□□□□ -1.06
SMC1A-205ENST00000469129 SMIM19Q96E16 107 aa8.4□□□□□ -1.06
SMC1A-205ENST00000469129 ARL5BQ96KC2 179 aa8.4□□□□□ -1.06
SMC1A-205ENST00000469129 CEP19Q96LK0 163 aa8.4□□□□□ -1.06
SMC1A-205ENST00000469129 PIGQQ9BRB3 760 aa8.4□□□□□ -1.06
SMC1A-205ENST00000469129 CDADC1Q9BWV3 514 aa8.4□□□□□ -1.06
SMC1A-205ENST00000469129 RNF167Q9H6Y7 350 aa8.4□□□□□ -1.06
SMC1A-205ENST00000469129 ISG20L2Q9H9L3 353 aaKnown RBP8.4□□□□□ -1.06
SMC1A-205ENST00000469129 SMURF1Q9HCE7 757 aa8.4□□□□□ -1.06
SMC1A-205ENST00000469129 LAMP5Q9UJQ1 280 aa8.4□□□□□ -1.06
SMC1A-205ENST00000469129 GNG8Q9UK08 70 aa8.4□□□□□ -1.06
SMC1A-205ENST00000469129 BOKQ9UMX3 212 aaPredicted RBP8.4□□□□□ -1.06
SMC1A-205ENST00000469129 HRH3Q9Y5N1 445 aa8.4□□□□□ -1.06
SMC1A-205ENST00000469129 PMF1-BGLAPU3KQ54 211 aa8.4□□□□□ -1.06
SMC1A-205ENST00000469129 SLC22A23A1A5C7 686 aa8.39□□□□□ -1.07
SMC1A-205ENST00000469129 SHISA8B8ZZ34 492 aa8.39□□□□□ -1.07
SMC1A-205ENST00000469129 MS4A18H0YCH9 400 aa8.39□□□□□ -1.07
SMC1A-205ENST00000469129 SULT2B1O00204 365 aa8.39□□□□□ -1.07
SMC1A-205ENST00000469129 CASKO14936 926 aa8.39□□□□□ -1.07
SMC1A-205ENST00000469129 DNPH1O43598 174 aa8.39□□□□□ -1.07
SMC1A-205ENST00000469129 EIF1BO60739 113 aaKnown RBP8.39□□□□□ -1.07
SMC1A-205ENST00000469129 SULT1C4O75897 302 aa8.39□□□□□ -1.07
SMC1A-205ENST00000469129 VAMP5O95183 116 aa8.39□□□□□ -1.07
SMC1A-205ENST00000469129 HLA-DQA2P01906 255 aa8.39□□□□□ -1.07
SMC1A-205ENST00000469129 CD40LGP29965 261 aa8.39□□□□□ -1.07
SMC1A-205ENST00000469129 MTNR1BP49286 362 aa8.39□□□□□ -1.07
SMC1A-205ENST00000469129 GDI2P50395 445 aaKnown RBP8.39□□□□□ -1.07
SMC1A-205ENST00000469129 RRADP55042 308 aa8.39□□□□□ -1.07
SMC1A-205ENST00000469129 OR12D2P58182 307 aa8.39□□□□□ -1.07
SMC1A-205ENST00000469129 FABP5Q01469 135 aa8.39□□□□□ -1.07
SMC1A-205ENST00000469129 ZNF45Q02386 682 aa8.39□□□□□ -1.07
SMC1A-205ENST00000469129 OC90Q02509 493 aaPredicted RBP8.39□□□□□ -1.07
SMC1A-205ENST00000469129 GLO1Q04760 184 aa8.39□□□□□ -1.07
SMC1A-205ENST00000469129 EGR3Q06889 387 aa8.39□□□□□ -1.07
SMC1A-205ENST00000469129 MELKQ14680 651 aa8.39□□□□□ -1.07
SMC1A-205ENST00000469129 INAQ16352 499 aa8.39□□□□□ -1.07
SMC1A-205ENST00000469129 MS4A18Q3C1V0 323 aa8.39□□□□□ -1.07
SMC1A-205ENST00000469129 TP53I3Q53FA7 332 aa8.39□□□□□ -1.07
SMC1A-205ENST00000469129 SPANXN2Q5MJ10 180 aa8.39□□□□□ -1.07
SMC1A-205ENST00000469129 DMKNQ6E0U4 476 aaPredicted RBP8.39□□□□□ -1.07
SMC1A-205ENST00000469129 TIGD4Q8IY51 512 aa8.39□□□□□ -1.07
SMC1A-205ENST00000469129 OR6V1Q8N148 313 aa8.39□□□□□ -1.07
SMC1A-205ENST00000469129 BEST3Q8N1M1 668 aa8.39□□□□□ -1.07
SMC1A-205ENST00000469129 MFSD4AQ8N468 514 aa8.39□□□□□ -1.07
SMC1A-205ENST00000469129 ZNF454Q8N9F8 522 aa8.39□□□□□ -1.07
SMC1A-205ENST00000469129 CLEC1AQ8NC01 280 aa8.39□□□□□ -1.07
SMC1A-205ENST00000469129 NOXO1Q8NFA2 376 aa8.39□□□□□ -1.07
SMC1A-205ENST00000469129 NEIL3Q8TAT5 605 aa8.39□□□□□ -1.07
SMC1A-205ENST00000469129 THRSPQ92748 146 aa8.39□□□□□ -1.07
SMC1A-205ENST00000469129 TMEM203Q969S6 136 aa8.39□□□□□ -1.07
SMC1A-205ENST00000469129 MIB2Q96AX9 1013 aa8.39□□□□□ -1.07
SMC1A-205ENST00000469129 DNAJA3Q96EY1 480 aa8.39□□□□□ -1.07
SMC1A-205ENST00000469129 TRMT61AQ96FX7 289 aaKnown RBP8.39□□□□□ -1.07
SMC1A-205ENST00000469129 ADAD1Q96M93 576 aaKnown RBP8.39□□□□□ -1.07
SMC1A-205ENST00000469129 JSRP1Q96MG2 331 aaPredicted RBP8.39□□□□□ -1.07
SMC1A-205ENST00000469129 OR5B2Q96R09 309 aa8.39□□□□□ -1.07
SMC1A-205ENST00000469129 TM9SF2Q99805 663 aa8.39□□□□□ -1.07
SMC1A-205ENST00000469129 SH3GL3Q99963 347 aa8.39□□□□□ -1.07
SMC1A-205ENST00000469129 UTP23Q9BRU9 249 aaKnown RBP8.39□□□□□ -1.07
SMC1A-205ENST00000469129 TTYH2Q9BSA4 534 aa8.39□□□□□ -1.07
SMC1A-205ENST00000469129 NAA11Q9BSU3 229 aaPredicted RBP8.39□□□□□ -1.07
SMC1A-205ENST00000469129 SRA1Q9HD15 236 aaKnown RBP8.39□□□□□ -1.07
SMC1A-205ENST00000469129 SNTG1Q9NSN8 517 aa8.39□□□□□ -1.07
SMC1A-205ENST00000469129 B4GALT7Q9UBV7 327 aa8.39□□□□□ -1.07
SMC1A-205ENST00000469129 ST6GALNAC2Q9UJ37 374 aa8.39□□□□□ -1.07
SMC1A-205ENST00000469129 ZMIZ1Q9ULJ6 1067 aa8.39□□□□□ -1.07
SMC1A-205ENST00000469129 B9D1Q9UPM9 204 aa8.39□□□□□ -1.07
SMC1A-205ENST00000469129 RASD1Q9Y272 281 aa8.39□□□□□ -1.07
SMC1A-205ENST00000469129 MRPS18CQ9Y3D5 142 aaKnown RBP8.39□□□□□ -1.07
SMC1A-205ENST00000469129 FREM3P0C091 2139 aa8.39□□□□□ -1.07
SMC1A-205ENST00000469129 ARPC4-TTLL3A0A0A6YYG9 625 aa8.38□□□□□ -1.07
SMC1A-205ENST00000469129 IGLV1-36A0A0B4J1U3 117 aa8.38□□□□□ -1.07
SMC1A-205ENST00000469129 LOC102725191A0A1B0GVB3 256 aa8.38□□□□□ -1.07
SMC1A-205ENST00000469129 AQP7P3A6NL99 342 aa8.38□□□□□ -1.07
SMC1A-205ENST00000469129 CDRT15L2A8MXV6 281 aa8.38□□□□□ -1.07
SMC1A-205ENST00000469129 LINC01387J3KSC0 135 aa8.38□□□□□ -1.07
SMC1A-205ENST00000469129 TM4SF5O14894 197 aa8.38□□□□□ -1.07
SMC1A-205ENST00000469129 OGG1O15527 345 aa8.38□□□□□ -1.07
SMC1A-205ENST00000469129 SLC16A7O60669 478 aa8.38□□□□□ -1.07
SMC1A-205ENST00000469129 KHDRBS3O75525 346 aaKnown RBP8.38□□□□□ -1.07
SMC1A-205ENST00000469129 GATBO75879 557 aaKnown RBP8.38□□□□□ -1.07
SMC1A-205ENST00000469129 ARL6IP5O75915 188 aa8.38□□□□□ -1.07
SMC1A-205ENST00000469129 AKR7A3O95154 331 aa8.38□□□□□ -1.07
SMC1A-205ENST00000469129 WISP1O95388 367 aa8.38□□□□□ -1.07
SMC1A-205ENST00000469129 LIPCP11150 499 aa8.38□□□□□ -1.07
SMC1A-205ENST00000469129 BMP4P12644 408 aa8.38□□□□□ -1.07
SMC1A-205ENST00000469129 IFNGR1P15260 489 aa8.38□□□□□ -1.07
SMC1A-205ENST00000469129 IL11P20809 199 aa8.38□□□□□ -1.07
SMC1A-205ENST00000469129 EDNRAP25101 427 aa8.38□□□□□ -1.07
SMC1A-205ENST00000469129 ITGA3P26006 1051 aa8.38□□□□□ -1.07
SMC1A-205ENST00000469129 RPS19P39019 145 aaKnown RBP8.38□□□□□ -1.07
SMC1A-205ENST00000469129 ETV6P41212 452 aa8.38□□□□□ -1.07
SMC1A-205ENST00000469129 RAC1P63000 192 aa8.38□□□□□ -1.07
SMC1A-205ENST00000469129 SIRPAP78324 504 aa8.38□□□□□ -1.07
SMC1A-205ENST00000469129 HNRNPA0Q13151 305 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms