RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 NUDT2P50583 147 aa14.84□□□□□ -0.03
SSBP1-207ENST00000468267 IDH3GP51553 393 aaPredicted RBP14.84□□□□□ -0.03
SSBP1-207ENST00000468267 RPL18Q07020 188 aaKnown RBP14.84□□□□□ -0.03
SSBP1-207ENST00000468267 ST3GAL3Q11203 375 aa14.84□□□□□ -0.03
SSBP1-207ENST00000468267 LRFN4Q6PJG9 635 aa14.84□□□□□ -0.03
SSBP1-207ENST00000468267 VTCN1Q7Z7D3 282 aa14.84□□□□□ -0.03
SSBP1-207ENST00000468267 IL17RDQ8NFM7 739 aa14.84□□□□□ -0.03
SSBP1-207ENST00000468267 ZNF566Q969W8 418 aa14.84□□□□□ -0.03
SSBP1-207ENST00000468267 FBXO17Q96EF6 278 aa14.84□□□□□ -0.03
SSBP1-207ENST00000468267 PRRC1Q96M27 445 aa14.84□□□□□ -0.03
SSBP1-207ENST00000468267 CA10Q9NS85 328 aa14.84□□□□□ -0.03
SSBP1-207ENST00000468267 MED31Q9Y3C7 131 aa14.84□□□□□ -0.03
SSBP1-207ENST00000468267 ABCA2Q9BZC7 2435 aa14.84□□□□□ -0.03
SSBP1-207ENST00000468267 IGHV2OR16-5A0A0B4J2B6 119 aa14.83□□□□□ -0.04
SSBP1-207ENST00000468267 NDUFAB1O14561 156 aa14.83□□□□□ -0.04
SSBP1-207ENST00000468267 SNX3O60493 162 aa14.83□□□□□ -0.04
SSBP1-207ENST00000468267 BCL10O95999 233 aa14.83□□□□□ -0.04
SSBP1-207ENST00000468267 TSPAN19P0C672 248 aa14.83□□□□□ -0.04
SSBP1-207ENST00000468267 PGA4P0DJD7 388 aa14.83□□□□□ -0.04
SSBP1-207ENST00000468267 PGA3P0DJD8 388 aa14.83□□□□□ -0.04
SSBP1-207ENST00000468267 B4GALT1P15291 398 aa14.83□□□□□ -0.04
SSBP1-207ENST00000468267 SERPINF1P36955 418 aa14.83□□□□□ -0.04
SSBP1-207ENST00000468267 NUDT6P53370 316 aa14.83□□□□□ -0.04
SSBP1-207ENST00000468267 HGFACQ04756 655 aa14.83□□□□□ -0.04
SSBP1-207ENST00000468267 MELKQ14680 651 aa14.83□□□□□ -0.04
SSBP1-207ENST00000468267 KRTAP21-3Q3LHN1 58 aa14.83□□□□□ -0.04
SSBP1-207ENST00000468267 CBLL1Q75N03 491 aa14.83□□□□□ -0.04
SSBP1-207ENST00000468267 PIWIL3Q7Z3Z3 882 aaKnown RBP14.83□□□□□ -0.04
SSBP1-207ENST00000468267 NUP37Q8NFH4 326 aa14.83□□□□□ -0.04
SSBP1-207ENST00000468267 FOXB1Q99853 325 aa14.83□□□□□ -0.04
SSBP1-207ENST00000468267 FAM107BQ9H098 131 aa14.83□□□□□ -0.04
SSBP1-207ENST00000468267 NSRP1Q9H0G5 558 aaKnown RBP14.83□□□□□ -0.04
SSBP1-207ENST00000468267 SNX13Q9Y5W8 968 aa14.83□□□□□ -0.04
SSBP1-207ENST00000468267 YLPM1P49750 1951 aaKnown RBP14.83□□□□□ -0.04
SSBP1-207ENST00000468267 A0A1W2PRG6 482 aa14.82□□□□□ -0.04
SSBP1-207ENST00000468267 HTR3EA5X5Y0 456 aa14.82□□□□□ -0.04
SSBP1-207ENST00000468267 GMNCA6NCL1 334 aa14.82□□□□□ -0.04
SSBP1-207ENST00000468267 PDE5AO76074 875 aa14.82□□□□□ -0.04
SSBP1-207ENST00000468267 ZNF682O95780 498 aa14.82□□□□□ -0.04
SSBP1-207ENST00000468267 IFNW1P05000 195 aa14.82□□□□□ -0.04
SSBP1-207ENST00000468267 F13BP05160 661 aa14.82□□□□□ -0.04
SSBP1-207ENST00000468267 CD79AP11912 226 aa14.82□□□□□ -0.04
SSBP1-207ENST00000468267 PRDX6P30041 224 aa14.82□□□□□ -0.04
SSBP1-207ENST00000468267 IFNA8P32881 189 aa14.82□□□□□ -0.04
SSBP1-207ENST00000468267 LSP1P33241 339 aa14.82□□□□□ -0.04
SSBP1-207ENST00000468267 AQP2P41181 271 aa14.82□□□□□ -0.04
SSBP1-207ENST00000468267 DSCR9P59020 149 aa14.82□□□□□ -0.04
SSBP1-207ENST00000468267 PSME3P61289 254 aa14.82□□□□□ -0.04
SSBP1-207ENST00000468267 PIGFQ07326 219 aa14.82□□□□□ -0.04
SSBP1-207ENST00000468267 NPRL3Q12980 569 aa14.82□□□□□ -0.04
SSBP1-207ENST00000468267 ADIPOQQ15848 244 aa14.82□□□□□ -0.04
SSBP1-207ENST00000468267 HIST3H3Q16695 136 aa14.82□□□□□ -0.04
SSBP1-207ENST00000468267 GSG1Q2KHT4 349 aa14.82□□□□□ -0.04
SSBP1-207ENST00000468267 CPLX4Q7Z7G2 160 aa14.82□□□□□ -0.04
SSBP1-207ENST00000468267 MAPK1IP1LQ8NDC0 245 aa14.82□□□□□ -0.04
SSBP1-207ENST00000468267 OR10H5Q8NGA6 315 aa14.82□□□□□ -0.04
SSBP1-207ENST00000468267 GEMIN6Q8WXD5 167 aaKnown RBP14.82□□□□□ -0.04
SSBP1-207ENST00000468267 HTRA1Q92743 480 aa14.82□□□□□ -0.04
SSBP1-207ENST00000468267 ZNF75AQ96N20 296 aa14.82□□□□□ -0.04
SSBP1-207ENST00000468267 KCTD14Q9BQ13 255 aaPredicted RBP14.82□□□□□ -0.04
SSBP1-207ENST00000468267 RHNO1Q9BSD3 238 aa14.82□□□□□ -0.04
SSBP1-207ENST00000468267 DENND2DQ9H6A0 471 aaPredicted RBP14.82□□□□□ -0.04
SSBP1-207ENST00000468267 NOX3Q9HBY0 568 aa14.82□□□□□ -0.04
SSBP1-207ENST00000468267 INIPQ9NRY2 104 aa14.82□□□□□ -0.04
SSBP1-207ENST00000468267 ZNF224Q9NZL3 707 aa14.82□□□□□ -0.04
SSBP1-207ENST00000468267 ABCD2Q9UBJ2 740 aa14.82□□□□□ -0.04
SSBP1-207ENST00000468267 CHD3Q12873 2000 aaKnown RBP14.82□□□□□ -0.04
SSBP1-207ENST00000468267 B9A039 149 aa14.81□□□□□ -0.04
SSBP1-207ENST00000468267 FFAR1O14842 300 aa14.81□□□□□ -0.04
SSBP1-207ENST00000468267 DHHO43323 396 aa14.81□□□□□ -0.04
SSBP1-207ENST00000468267 PIP5K1CO60331 668 aa14.81□□□□□ -0.04
SSBP1-207ENST00000468267 SERPINA1P01009 418 aa14.81□□□□□ -0.04
SSBP1-207ENST00000468267 IGHG1P01857 330 aa14.81□□□□□ -0.04
SSBP1-207ENST00000468267 QDPRP09417 244 aa14.81□□□□□ -0.04
SSBP1-207ENST00000468267 OR4A8P0C604 315 aa14.81□□□□□ -0.04
SSBP1-207ENST00000468267 FUT4P22083 530 aa14.81□□□□□ -0.04
SSBP1-207ENST00000468267 YAP1P46937 504 aaKnown RBP14.81□□□□□ -0.04
SSBP1-207ENST00000468267 EFNA4P52798 201 aa14.81□□□□□ -0.04
SSBP1-207ENST00000468267 RUNX1T1Q06455 604 aa14.81□□□□□ -0.04
SSBP1-207ENST00000468267 LAPTM4AQ15012 233 aa14.81□□□□□ -0.04
SSBP1-207ENST00000468267 EFNB3Q15768 340 aa14.81□□□□□ -0.04
SSBP1-207ENST00000468267 IFI44LQ53G44 452 aa14.81□□□□□ -0.04
SSBP1-207ENST00000468267 VHLLQ6RSH7 139 aa14.81□□□□□ -0.04
SSBP1-207ENST00000468267 SKA3Q8IX90 412 aa14.81□□□□□ -0.04
SSBP1-207ENST00000468267 OFCC1Q8IZS5 231 aa14.81□□□□□ -0.04
SSBP1-207ENST00000468267 MOSPD2Q8NHP6 518 aa14.81□□□□□ -0.04
SSBP1-207ENST00000468267 ASB10Q8WXI3 467 aa14.81□□□□□ -0.04
SSBP1-207ENST00000468267 NANOS1Q8WY41 292 aaKnown RBP14.81□□□□□ -0.04
SSBP1-207ENST00000468267 BPIFA2Q96DR5 249 aa14.81□□□□□ -0.04
SSBP1-207ENST00000468267 SEPHS2Q99611 448 aa14.81□□□□□ -0.04
SSBP1-207ENST00000468267 FNDC11Q9BVV2 318 aa14.81□□□□□ -0.04
SSBP1-207ENST00000468267 MRPL13Q9BYD1 178 aaKnown RBP14.81□□□□□ -0.04
SSBP1-207ENST00000468267 ZNF442Q9H7R0 627 aa14.81□□□□□ -0.04
SSBP1-207ENST00000468267 MAN2C1Q9NTJ4 1040 aa14.81□□□□□ -0.04
SSBP1-207ENST00000468267 IGHV4-30-2A0A087WSY4 118 aa14.8□□□□□ -0.04
SSBP1-207ENST00000468267 CENPBD1B2RD01 187 aa14.8□□□□□ -0.04
SSBP1-207ENST00000468267 J3KTA2 159 aa14.8□□□□□ -0.04
SSBP1-207ENST00000468267 UBL3O95164 117 aa14.8□□□□□ -0.04
SSBP1-207ENST00000468267 F12P00748 615 aaPredicted RBP14.8□□□□□ -0.04
SSBP1-207ENST00000468267 ZNF14P17017 642 aaPredicted RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms