RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 POLQO75417 2590 aa11.93□□□□□ -0.5
SSBP1-206ENST00000467681 PLCE1Q9P212 2302 aa11.93□□□□□ -0.5
SSBP1-206ENST00000467681 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.93□□□□□ -0.5
SSBP1-206ENST00000467681 MCIDASD6RGH6 385 aa11.93□□□□□ -0.5
SSBP1-206ENST00000467681 TRMUO75648 421 aaKnown RBP11.93□□□□□ -0.5
SSBP1-206ENST00000467681 NDUFB2O95178 105 aa11.93□□□□□ -0.5
SSBP1-206ENST00000467681 IGHG1P01857 330 aa11.93□□□□□ -0.5
SSBP1-206ENST00000467681 CD14P08571 375 aa11.93□□□□□ -0.5
SSBP1-206ENST00000467681 PGA4P0DJD7 388 aa11.93□□□□□ -0.5
SSBP1-206ENST00000467681 PGA3P0DJD8 388 aa11.93□□□□□ -0.5
SSBP1-206ENST00000467681 FPR3P25089 353 aa11.93□□□□□ -0.5
SSBP1-206ENST00000467681 GSSP48637 474 aa11.93□□□□□ -0.5
SSBP1-206ENST00000467681 RPL27P61353 136 aaKnown RBP11.93□□□□□ -0.5
SSBP1-206ENST00000467681 ERVK-25P63136 954 aa11.93□□□□□ -0.5
SSBP1-206ENST00000467681 GK3PQ14409 553 aa11.93□□□□□ -0.5
SSBP1-206ENST00000467681 MELKQ14680 651 aa11.93□□□□□ -0.5
SSBP1-206ENST00000467681 HIST3H3Q16695 136 aa11.93□□□□□ -0.5
SSBP1-206ENST00000467681 TBRG1Q3YBR2 411 aa11.93□□□□□ -0.5
SSBP1-206ENST00000467681 ZNF770Q6IQ21 691 aaPredicted RBP11.93□□□□□ -0.5
SSBP1-206ENST00000467681 ARIH2OSQ8N7S6 290 aa11.93□□□□□ -0.5
SSBP1-206ENST00000467681 OR52N5Q8NH56 324 aa11.93□□□□□ -0.5
SSBP1-206ENST00000467681 SLCO4A1Q96BD0 722 aa11.93□□□□□ -0.5
SSBP1-206ENST00000467681 PIK3IP1Q96FE7 263 aa11.93□□□□□ -0.5
SSBP1-206ENST00000467681 RSRC1Q96IZ7 334 aaKnown RBP11.93□□□□□ -0.5
SSBP1-206ENST00000467681 ULBP2Q9BZM5 246 aa11.93□□□□□ -0.5
SSBP1-206ENST00000467681 YY1AP1Q9H869 796 aa11.93□□□□□ -0.5
SSBP1-206ENST00000467681 REEP1Q9H902 201 aa11.93□□□□□ -0.5
SSBP1-206ENST00000467681 OBP2BQ9NPH6 170 aa11.93□□□□□ -0.5
SSBP1-206ENST00000467681 VNN3Q9NY84 501 aa11.93□□□□□ -0.5
SSBP1-206ENST00000467681 POFUT2Q9Y2G5 429 aa11.93□□□□□ -0.5
SSBP1-206ENST00000467681 AMDHD2Q9Y303 409 aa11.93□□□□□ -0.5
SSBP1-206ENST00000467681 SAMHD1Q9Y3Z3 626 aaKnown RBP11.93□□□□□ -0.5
SSBP1-206ENST00000467681 CCDC168Q8NDH2 2452 aa11.93□□□□□ -0.5
SSBP1-206ENST00000467681 NBPF19A0A087WUL8 3843 aa11.92□□□□□ -0.5
SSBP1-206ENST00000467681 A0A1W2PPR1 153 aa11.92□□□□□ -0.5
SSBP1-206ENST00000467681 A0A1W2PR80 420 aa11.92□□□□□ -0.5
SSBP1-206ENST00000467681 DPRXA6NFQ7 191 aa11.92□□□□□ -0.5
SSBP1-206ENST00000467681 A6NIZ1 184 aa11.92□□□□□ -0.5
SSBP1-206ENST00000467681 ZNF99A8MXY4 864 aaPredicted RBP11.92□□□□□ -0.5
SSBP1-206ENST00000467681 FKBP6O75344 327 aa11.92□□□□□ -0.5
SSBP1-206ENST00000467681 CCNB2O95067 398 aa11.92□□□□□ -0.5
SSBP1-206ENST00000467681 CST1P01037 141 aa11.92□□□□□ -0.5
SSBP1-206ENST00000467681 GASTP01350 101 aa11.92□□□□□ -0.5
SSBP1-206ENST00000467681 IGHMP01871 453 aa11.92□□□□□ -0.5
SSBP1-206ENST00000467681 QDPRP09417 244 aa11.92□□□□□ -0.5
SSBP1-206ENST00000467681 PAX7P23759 505 aa11.92□□□□□ -0.5
SSBP1-206ENST00000467681 RPL4P36578 427 aaKnown RBP11.92□□□□□ -0.5
SSBP1-206ENST00000467681 NR1H2P55055 460 aa11.92□□□□□ -0.5
SSBP1-206ENST00000467681 RAP1BP61224 184 aa11.92□□□□□ -0.5
SSBP1-206ENST00000467681 RAP1AP62834 184 aa11.92□□□□□ -0.5
SSBP1-206ENST00000467681 PPP1R8Q12972 351 aaKnown RBP11.92□□□□□ -0.5
SSBP1-206ENST00000467681 MICAQ29983 383 aa11.92□□□□□ -0.5
SSBP1-206ENST00000467681 HIKESHIQ53FT3 197 aa11.92□□□□□ -0.5
SSBP1-206ENST00000467681 NCMAPQ5T1S8 102 aa11.92□□□□□ -0.5
SSBP1-206ENST00000467681 FBXW10Q5XX13 1052 aa11.92□□□□□ -0.5
SSBP1-206ENST00000467681 FAM205BPQ63HN1 556 aa11.92□□□□□ -0.5
SSBP1-206ENST00000467681 PGBD2Q6P3X8 592 aa11.92□□□□□ -0.5
SSBP1-206ENST00000467681 DPY19L2P2Q6ZN68 376 aa11.92□□□□□ -0.5
SSBP1-206ENST00000467681 ZNF627Q7L945 461 aa11.92□□□□□ -0.5
SSBP1-206ENST00000467681 IGFN1Q86VF2 1251 aa11.92□□□□□ -0.5
SSBP1-206ENST00000467681 CCDC36Q8IYA8 594 aa11.92□□□□□ -0.5
SSBP1-206ENST00000467681 HDAC2Q92769 488 aaKnown RBP11.92□□□□□ -0.5
SSBP1-206ENST00000467681 MCHR2Q969V1 340 aa11.92□□□□□ -0.5
SSBP1-206ENST00000467681 NMD3Q96D46 503 aaKnown RBP11.92□□□□□ -0.5
SSBP1-206ENST00000467681 PLPPR2Q96GM1 343 aa11.92□□□□□ -0.5
SSBP1-206ENST00000467681 TMEM204Q9BSN7 226 aa11.92□□□□□ -0.5
SSBP1-206ENST00000467681 NDEL1Q9GZM8 345 aa11.92□□□□□ -0.5
SSBP1-206ENST00000467681 PLEKHF2Q9H8W4 249 aa11.92□□□□□ -0.5
SSBP1-206ENST00000467681 ARID1AO14497 2285 aa11.91□□□□□ -0.5
SSBP1-206ENST00000467681 A0A096LPE4 126 aa11.91□□□□□ -0.5
SSBP1-206ENST00000467681 ARPC4-TTLL3A0A0A6YYG9 625 aa11.91□□□□□ -0.5
SSBP1-206ENST00000467681 A0A1W2PPZ6 126 aa11.91□□□□□ -0.5
SSBP1-206ENST00000467681 DHHO43323 396 aa11.91□□□□□ -0.5
SSBP1-206ENST00000467681 WNT11O96014 354 aa11.91□□□□□ -0.5
SSBP1-206ENST00000467681 ACVR1BP36896 505 aa11.91□□□□□ -0.5
SSBP1-206ENST00000467681 ERFP50548 548 aa11.91□□□□□ -0.5
SSBP1-206ENST00000467681 ZNF133P52736 654 aaPredicted RBP11.91□□□□□ -0.5
SSBP1-206ENST00000467681 CLRN1P58418 232 aa11.91□□□□□ -0.5
SSBP1-206ENST00000467681 FXYD6P3P58550 94 aa11.91□□□□□ -0.5
SSBP1-206ENST00000467681 UBE2NP61088 152 aaKnown RBP11.91□□□□□ -0.5
SSBP1-206ENST00000467681 TSPAN31Q12999 210 aa11.91□□□□□ -0.5
SSBP1-206ENST00000467681 TOP3AQ13472 1001 aaPredicted RBP11.91□□□□□ -0.5
SSBP1-206ENST00000467681 RFX4Q33E94 735 aa11.91□□□□□ -0.5
SSBP1-206ENST00000467681 C1orf146Q5VVC0 180 aa11.91□□□□□ -0.5
SSBP1-206ENST00000467681 GPR139Q6DWJ6 353 aa11.91□□□□□ -0.5
SSBP1-206ENST00000467681 THSD4Q6ZMP0 1018 aa11.91□□□□□ -0.5
SSBP1-206ENST00000467681 SYT14Q8NB59 555 aa11.91□□□□□ -0.5
SSBP1-206ENST00000467681 ZNF519Q8TB69 540 aa11.91□□□□□ -0.5
SSBP1-206ENST00000467681 UTP4Q969X6 686 aaKnown RBP11.91□□□□□ -0.5
SSBP1-206ENST00000467681 DUS3LQ96G46 650 aaKnown RBP11.91□□□□□ -0.5
SSBP1-206ENST00000467681 HS3ST6Q96QI5 342 aa11.91□□□□□ -0.5
SSBP1-206ENST00000467681 RBP7Q96R05 134 aa11.91□□□□□ -0.5
SSBP1-206ENST00000467681 GPX7Q96SL4 187 aaPredicted RBP11.91□□□□□ -0.5
SSBP1-206ENST00000467681 KCNK17Q96T54 332 aa11.91□□□□□ -0.5
SSBP1-206ENST00000467681 ALG12Q9BV10 488 aa11.91□□□□□ -0.5
SSBP1-206ENST00000467681 KATNB1Q9BVA0 655 aa11.91□□□□□ -0.5
SSBP1-206ENST00000467681 C1QTNF6Q9BXI9 259 aa11.91□□□□□ -0.5
SSBP1-206ENST00000467681 NELFAQ9H3P2 528 aa11.91□□□□□ -0.5
SSBP1-206ENST00000467681 ESRP2Q9H6T0 727 aaKnown RBP11.91□□□□□ -0.5
SSBP1-206ENST00000467681 NRIP3Q9NQ35 241 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms