RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 STSP08842 583 aa10.81□□□□□ -0.68
VPS16-206ENST00000466415 MRPL3P09001 348 aaKnown RBP10.81□□□□□ -0.68
VPS16-206ENST00000466415 SLC2A5P22732 501 aa10.81□□□□□ -0.68
VPS16-206ENST00000466415 CRABP1P29762 137 aa10.81□□□□□ -0.68
VPS16-206ENST00000466415 GSTT1P30711 240 aa10.81□□□□□ -0.68
VPS16-206ENST00000466415 PYCR1P32322 319 aa10.81□□□□□ -0.68
VPS16-206ENST00000466415 SLC15A1P46059 708 aa10.81□□□□□ -0.68
VPS16-206ENST00000466415 CSNK1A1P48729 337 aa10.81□□□□□ -0.68
VPS16-206ENST00000466415 CAMK2DQ13557 499 aa10.81□□□□□ -0.68
VPS16-206ENST00000466415 RNPS1Q15287 305 aaKnown RBP10.81□□□□□ -0.68
VPS16-206ENST00000466415 EXD3Q8N9H8 876 aa10.81□□□□□ -0.68
VPS16-206ENST00000466415 SYT14Q8NB59 555 aa10.81□□□□□ -0.68
VPS16-206ENST00000466415 OR51L1Q8NGJ5 315 aa10.81□□□□□ -0.68
VPS16-206ENST00000466415 OR52I1Q8NGK6 324 aa10.81□□□□□ -0.68
VPS16-206ENST00000466415 OR6N1Q8NGY5 312 aa10.81□□□□□ -0.68
VPS16-206ENST00000466415 OR6X1Q8NH79 312 aa10.81□□□□□ -0.68
VPS16-206ENST00000466415 FNDC9Q8TBE3 224 aa10.81□□□□□ -0.68
VPS16-206ENST00000466415 FNDC8Q8TC99 324 aa10.81□□□□□ -0.68
VPS16-206ENST00000466415 RNF128Q8TEB7 428 aa10.81□□□□□ -0.68
VPS16-206ENST00000466415 SGCDQ92629 289 aa10.81□□□□□ -0.68
VPS16-206ENST00000466415 PTP4A1Q93096 173 aa10.81□□□□□ -0.68
VPS16-206ENST00000466415 LGALS12Q96DT0 336 aa10.81□□□□□ -0.68
VPS16-206ENST00000466415 ZMYND19Q96E35 227 aaPredicted RBP10.81□□□□□ -0.68
VPS16-206ENST00000466415 SLC25A44Q96H78 314 aaPredicted RBP10.81□□□□□ -0.68
VPS16-206ENST00000466415 RBP7Q96R05 134 aa10.81□□□□□ -0.68
VPS16-206ENST00000466415 CNN2Q99439 309 aaKnown RBP10.81□□□□□ -0.68
VPS16-206ENST00000466415 TUBA1CQ9BQE3 449 aa10.81□□□□□ -0.68
VPS16-206ENST00000466415 NMNAT2Q9BZQ4 307 aa10.81□□□□□ -0.68
VPS16-206ENST00000466415 SRA1Q9HD15 236 aaKnown RBP10.81□□□□□ -0.68
VPS16-206ENST00000466415 PLSCR2Q9NRY7 297 aa10.81□□□□□ -0.68
VPS16-206ENST00000466415 FKBP14Q9NWM8 211 aa10.81□□□□□ -0.68
VPS16-206ENST00000466415 ZMIZ1Q9ULJ6 1067 aa10.81□□□□□ -0.68
VPS16-206ENST00000466415 ZNF175Q9Y473 711 aa10.81□□□□□ -0.68
VPS16-206ENST00000466415 FKBP7Q9Y680 259 aa10.81□□□□□ -0.68
VPS16-206ENST00000466415 COMMD3-BMI1R4GMX3 469 aa10.81□□□□□ -0.68
VPS16-206ENST00000466415 ZNF716A6NP11 495 aa10.8□□□□□ -0.68
VPS16-206ENST00000466415 FAM171A2A8MVW0 826 aa10.8□□□□□ -0.68
VPS16-206ENST00000466415 CENPBD1B2RD01 187 aa10.8□□□□□ -0.68
VPS16-206ENST00000466415 GPR171O14626 319 aa10.8□□□□□ -0.68
VPS16-206ENST00000466415 MYL12BO14950 172 aa10.8□□□□□ -0.68
VPS16-206ENST00000466415 SLC16A7O60669 478 aa10.8□□□□□ -0.68
VPS16-206ENST00000466415 SLC43A1O75387 559 aa10.8□□□□□ -0.68
VPS16-206ENST00000466415 KHDRBS3O75525 346 aaKnown RBP10.8□□□□□ -0.68
VPS16-206ENST00000466415 HLA-DQA2P01906 255 aa10.8□□□□□ -0.68
VPS16-206ENST00000466415 PGA4P0DJD7 388 aa10.8□□□□□ -0.68
VPS16-206ENST00000466415 PGA3P0DJD8 388 aa10.8□□□□□ -0.68
VPS16-206ENST00000466415 SFTPCP11686 197 aa10.8□□□□□ -0.68
VPS16-206ENST00000466415 BLVRAP53004 296 aa10.8□□□□□ -0.68
VPS16-206ENST00000466415 ACTC1P68032 377 aa10.8□□□□□ -0.68
VPS16-206ENST00000466415 ACTA1P68133 377 aa10.8□□□□□ -0.68
VPS16-206ENST00000466415 MVKQ03426 396 aa10.8□□□□□ -0.68
VPS16-206ENST00000466415 RUNX1T1Q06455 604 aa10.8□□□□□ -0.68
VPS16-206ENST00000466415 KLRB1Q12918 225 aa10.8□□□□□ -0.68
VPS16-206ENST00000466415 BLMHQ13867 455 aa10.8□□□□□ -0.68
VPS16-206ENST00000466415 SF3B4Q15427 424 aaKnown RBP eCLIP10.8□□□□□ -0.68
VPS16-206ENST00000466415 NEDD8Q15843 81 aa10.8□□□□□ -0.68
VPS16-206ENST00000466415 KRTCAP3Q53RY4 240 aa10.8□□□□□ -0.68
VPS16-206ENST00000466415 C19orf48Q6RUI8 117 aa10.8□□□□□ -0.68
VPS16-206ENST00000466415 KCTD8Q6ZWB6 473 aa10.8□□□□□ -0.68
VPS16-206ENST00000466415 SHFQ7M4L6 423 aa10.8□□□□□ -0.68
VPS16-206ENST00000466415 AAED1Q7RTV5 226 aa10.8□□□□□ -0.68
VPS16-206ENST00000466415 SPARTQ8N0X7 666 aa10.8□□□□□ -0.68
VPS16-206ENST00000466415 POMGNT2Q8NAT1 580 aa10.8□□□□□ -0.68
VPS16-206ENST00000466415 OR5M9Q8NGP3 310 aa10.8□□□□□ -0.68
VPS16-206ENST00000466415 ABHD3Q8WU67 409 aa10.8□□□□□ -0.68
VPS16-206ENST00000466415 KISS1RQ969F8 398 aaPredicted RBP10.8□□□□□ -0.68
VPS16-206ENST00000466415 TSSK2Q96PF2 358 aa10.8□□□□□ -0.68
VPS16-206ENST00000466415 ZNF385AQ96PM9 386 aaKnown RBP10.8□□□□□ -0.68
VPS16-206ENST00000466415 TRIB1Q96RU8 372 aa10.8□□□□□ -0.68
VPS16-206ENST00000466415 KCNK17Q96T54 332 aa10.8□□□□□ -0.68
VPS16-206ENST00000466415 TEAD3Q99594 435 aa10.8□□□□□ -0.68
VPS16-206ENST00000466415 NUAK2Q9H093 628 aa10.8□□□□□ -0.68
VPS16-206ENST00000466415 RACGAP1Q9H0H5 632 aa10.8□□□□□ -0.68
VPS16-206ENST00000466415 SLC25A18Q9H1K4 315 aa10.8□□□□□ -0.68
VPS16-206ENST00000466415 MRPS18AQ9NVS2 196 aaKnown RBP10.8□□□□□ -0.68
VPS16-206ENST00000466415 DIMT1Q9UNQ2 313 aaKnown RBP10.8□□□□□ -0.68
VPS16-206ENST00000466415 RCE1Q9Y256 329 aa10.8□□□□□ -0.68
VPS16-206ENST00000466415 EXOSC1Q9Y3B2 195 aaKnown RBP10.8□□□□□ -0.68
VPS16-206ENST00000466415 PCDHGB1Q9Y5G3 927 aa10.8□□□□□ -0.68
VPS16-206ENST00000466415 FLVCR1Q9Y5Y0 555 aa10.8□□□□□ -0.68
VPS16-206ENST00000466415 URB1O60287 2271 aaKnown RBP10.8□□□□□ -0.68
VPS16-206ENST00000466415 ASPMQ8IZT6 3477 aa10.79□□□□□ -0.68
VPS16-206ENST00000466415 HTR1AP08908 422 aa10.79□□□□□ -0.68
VPS16-206ENST00000466415 DCKP27707 260 aa10.79□□□□□ -0.68
VPS16-206ENST00000466415 PTGS2P35354 604 aa10.79□□□□□ -0.68
VPS16-206ENST00000466415 NAA10P41227 235 aaPredicted RBP10.79□□□□□ -0.68
VPS16-206ENST00000466415 NR1H2P55055 460 aa10.79□□□□□ -0.68
VPS16-206ENST00000466415 FMODQ06828 376 aa10.79□□□□□ -0.68
VPS16-206ENST00000466415 GGTLC2Q14390 218 aa10.79□□□□□ -0.68
VPS16-206ENST00000466415 THEM4Q5T1C6 240 aa10.79□□□□□ -0.68
VPS16-206ENST00000466415 B3GLCTQ6Y288 498 aa10.79□□□□□ -0.68
VPS16-206ENST00000466415 CISD2Q8N5K1 135 aaKnown RBP10.79□□□□□ -0.68
VPS16-206ENST00000466415 Q8NA96 180 aa10.79□□□□□ -0.68
VPS16-206ENST00000466415 OR10H4Q8NGA5 316 aa10.79□□□□□ -0.68
VPS16-206ENST00000466415 OR4F15Q8NGB8 312 aa10.79□□□□□ -0.68
VPS16-206ENST00000466415 NSMAFQ92636 917 aa10.79□□□□□ -0.68
VPS16-206ENST00000466415 OR2M2Q96R28 347 aa10.79□□□□□ -0.68
VPS16-206ENST00000466415 DDOQ99489 341 aa10.79□□□□□ -0.68
VPS16-206ENST00000466415 FGF20Q9NP95 211 aaPredicted RBP10.79□□□□□ -0.68
VPS16-206ENST00000466415 B3GAT2Q9NPZ5 323 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms