RNA–Protein interactions for RNA: ENST00000466048.6

USP54-210, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 4,674 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-210ENST00000466048 CTDSP2O14595 271 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 TOR1AO14656 332 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 P2RX6O15547 441 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 RBMXL2O75526 392 aaKnown RBP7.02□□□□□ -1.29
USP54-210ENST00000466048 ANKRD34CP0C6C1 535 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 ELAVL4P26378 380 aaKnown RBP7.02□□□□□ -1.29
USP54-210ENST00000466048 GALNSP34059 522 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 LIMS1P48059 325 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 ZNF628Q5EBL2 1059 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 RHBDD2Q6NTF9 364 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 NDUFAF7Q7L592 441 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 OR10K1Q8NGX5 313 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 BRIX1Q8TDN6 353 aaKnown RBP7.02□□□□□ -1.29
USP54-210ENST00000466048 ASB13Q8WXK3 278 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 SLC25A36Q96CQ1 311 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 TMEM121BQ9BXQ6 578 aaPredicted RBP7.02□□□□□ -1.29
USP54-210ENST00000466048 RNF32Q9H0A6 362 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 FSCN3Q9NQT6 498 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 INPP5EQ9NRR6 644 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 PARPBPQ9NWS1 579 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 GSKIPQ9P0R6 139 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 CYB5R1Q9UHQ9 305 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 LOC102723532A0A0G2JNH3 316 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 ZNF705FA8MVS1 300 aaPredicted RBP7.02□□□□□ -1.29
USP54-210ENST00000466048 GOSR2O14653 212 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 PPP1R2P9O14990 202 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 RAB40ALP0C0E4 278 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 FTH1P19P0C7X4 201 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 ZNF705DP0CH99 300 aaPredicted RBP7.02□□□□□ -1.29
USP54-210ENST00000466048 ZNF705BP0CI00 300 aaPredicted RBP7.02□□□□□ -1.29
USP54-210ENST00000466048 FCGR2AP12318 317 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 TNFRSF1BP20333 461 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 TUBG1P23258 451 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 TRHRP34981 398 aaPredicted RBP7.02□□□□□ -1.29
USP54-210ENST00000466048 ID4P47928 161 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 SFRP4Q6FHJ7 346 aaPredicted RBP7.02□□□□□ -1.29
USP54-210ENST00000466048 FAM180BQ6P0A1 224 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 CELF2-AS1Q8N7Q2 184 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 OR52R1Q8NGF1 315 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 OR51G2Q8NGK0 314 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 SLC25A43Q8WUT9 341 aaPredicted RBP7.02□□□□□ -1.29
USP54-210ENST00000466048 RAB40AQ8WXH6 277 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 MARC2Q969Z3 335 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 SARAFQ96BY9 339 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 OR14A2Q96R54 314 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 NKX6-2Q9C056 277 aaPredicted RBP7.02□□□□□ -1.29
USP54-210ENST00000466048 TXNL4BQ9NX01 149 aaKnown RBP7.02□□□□□ -1.29
USP54-210ENST00000466048 ZNF443Q9Y2A4 671 aaPredicted RBP7.02□□□□□ -1.29
USP54-210ENST00000466048 SPAARA0A1B0GVQ0 90 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 DCDC2BA2VCK2 349 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 PATE3B3GLJ2 98 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 FTCDNL1E5RQL4 147 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 PPM1DO15297 605 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 PRKRAO75569 313 aaKnown RBP7.02□□□□□ -1.29
USP54-210ENST00000466048 MYF5P13349 255 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 DRD5P21918 477 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 GDF1P27539 372 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 PRSS3P35030 304 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 IDUAP35475 653 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 CRYBA2P53672 197 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 GFERP55789 205 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 SNRPGP62308 76 aaKnown RBP7.02□□□□□ -1.29
USP54-210ENST00000466048 DUSP8Q13202 625 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 DYRK1AQ13627 763 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 MEF2DQ14814 521 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 TMEM201Q5SNT2 666 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 D2HGDHQ8N465 521 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 SAP25Q8TEE9 199 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 RNF141Q8WVD5 230 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 NKD1Q969G9 470 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 SLC35B4Q969S0 331 aa7.02□□□□□ -1.29
USP54-210ENST00000466048 CIB4A0PJX0 185 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 ZNF878C9JN71 531 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 PRRG2O14669 202 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 CHRM4P08173 479 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 HOXB3P14651 431 aaPredicted RBP7.01□□□□□ -1.29
USP54-210ENST00000466048 NAGAP17050 411 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 HCCSP53701 268 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 ISXQ2M1V0 245 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 CTU2Q2VPK5 515 aaKnown RBP7.01□□□□□ -1.29
USP54-210ENST00000466048 PRTGQ2VWP7 1150 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 FRMPD2BQ6IN97 320 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 TCTN3Q6NUS6 607 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 HIST2H3AQ71DI3 136 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 OVCH1Q7RTY7 1134 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 ZNF546Q86UE3 836 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 ENTHD1Q8IYW4 607 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 GPR32P1Q8NGA4 272 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 STK35Q8TDR2 534 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 THOC3Q96J01 351 aaKnown RBP7.01□□□□□ -1.29
USP54-210ENST00000466048 LRFN3Q9BTN0 628 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 OR10A5Q9H207 317 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 AKIP1Q9NQ31 210 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 CTPS2Q9NRF8 586 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 CNIH4Q9P003 139 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 LUZP4Q9P127 313 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 PCDHGA6Q9Y5G7 932 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 SMIM30A4D0T7 59 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 C4orf51C9J302 202 aa7.01□□□□□ -1.29
USP54-210ENST00000466048 GPR171O14626 319 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms