RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 LRFN4Q6PJG9 635 aa18.88■□□□□ 0.61
LIME1-203ENST00000465591 SPATA21Q7Z572 469 aa18.88■□□□□ 0.61
LIME1-203ENST00000465591 ARPINQ7Z6K5 226 aa18.88■□□□□ 0.61
LIME1-203ENST00000465591 ZNF525Q8N782 197 aa18.88■□□□□ 0.61
LIME1-203ENST00000465591 TMEM239Q8WW34 195 aa18.88■□□□□ 0.61
LIME1-203ENST00000465591 MS4A3Q96HJ5 214 aa18.88■□□□□ 0.61
LIME1-203ENST00000465591 FOXB1Q99853 325 aa18.88■□□□□ 0.61
LIME1-203ENST00000465591 POLR2J2Q9GZM3 115 aaKnown RBP18.88■□□□□ 0.61
LIME1-203ENST00000465591 POLR2J3Q9H1A7 115 aaKnown RBP18.88■□□□□ 0.61
LIME1-203ENST00000465591 MYLK2Q9H1R3 596 aa18.88■□□□□ 0.61
LIME1-203ENST00000465591 GLTPQ9NZD2 209 aa18.88■□□□□ 0.61
LIME1-203ENST00000465591 A0A096LNT2 108 aa18.87■□□□□ 0.61
LIME1-203ENST00000465591 BLOC1S5-TXNDC5H3BN57 136 aa18.87■□□□□ 0.61
LIME1-203ENST00000465591 HIST1H2ABP04908 130 aa18.87■□□□□ 0.61
LIME1-203ENST00000465591 F13BP05160 661 aa18.87■□□□□ 0.61
LIME1-203ENST00000465591 ARR3P36575 388 aa18.87■□□□□ 0.61
LIME1-203ENST00000465591 YAP1P46937 504 aaKnown RBP18.87■□□□□ 0.61
LIME1-203ENST00000465591 GSK3BP49841 420 aa18.87■□□□□ 0.61
LIME1-203ENST00000465591 CHRNB3Q05901 458 aa18.87■□□□□ 0.61
LIME1-203ENST00000465591 PIGFQ07326 219 aa18.87■□□□□ 0.61
LIME1-203ENST00000465591 HIST3H2AQ7L7L0 130 aa18.87■□□□□ 0.61
LIME1-203ENST00000465591 OR10H5Q8NGA6 315 aa18.87■□□□□ 0.61
LIME1-203ENST00000465591 FGFBP3Q8TAT2 258 aa18.87■□□□□ 0.61
LIME1-203ENST00000465591 HIST1H2ACQ93077 130 aa18.87■□□□□ 0.61
LIME1-203ENST00000465591 SGTBQ96EQ0 304 aa18.87■□□□□ 0.61
LIME1-203ENST00000465591 INAFM1C9JVW0 142 aa18.86■□□□□ 0.61
LIME1-203ENST00000465591 J3KTA2 159 aa18.86■□□□□ 0.61
LIME1-203ENST00000465591 CXCR6O00574 342 aa18.86■□□□□ 0.61
LIME1-203ENST00000465591 OR4A8P0C604 315 aa18.86■□□□□ 0.61
LIME1-203ENST00000465591 PGA4P0DJD7 388 aa18.86■□□□□ 0.61
LIME1-203ENST00000465591 PGA3P0DJD8 388 aa18.86■□□□□ 0.61
LIME1-203ENST00000465591 CD79AP11912 226 aa18.86■□□□□ 0.61
LIME1-203ENST00000465591 THBS4P35443 961 aa18.86■□□□□ 0.61
LIME1-203ENST00000465591 SERPINF1P36955 418 aa18.86■□□□□ 0.61
LIME1-203ENST00000465591 AQP2P41181 271 aa18.86■□□□□ 0.61
LIME1-203ENST00000465591 CCDC36Q8IYA8 594 aa18.86■□□□□ 0.61
LIME1-203ENST00000465591 MOSPD2Q8NHP6 518 aa18.86■□□□□ 0.61
LIME1-203ENST00000465591 NANOS1Q8WY41 292 aaKnown RBP18.86■□□□□ 0.61
LIME1-203ENST00000465591 ZNF566Q969W8 418 aa18.86■□□□□ 0.61
LIME1-203ENST00000465591 SLC25A44Q96H78 314 aaPredicted RBP18.86■□□□□ 0.61
LIME1-203ENST00000465591 PRRC1Q96M27 445 aa18.86■□□□□ 0.61
LIME1-203ENST00000465591 SORCS2Q96PQ0 1159 aa18.86■□□□□ 0.61
LIME1-203ENST00000465591 FAM107BQ9H098 131 aa18.86■□□□□ 0.61
LIME1-203ENST00000465591 MOV10Q9HCE1 1003 aaKnown RBP18.86■□□□□ 0.61
LIME1-203ENST00000465591 MAN2C1Q9NTJ4 1040 aa18.86■□□□□ 0.61
LIME1-203ENST00000465591 FFAR1O14842 300 aa18.85■□□□□ 0.61
LIME1-203ENST00000465591 IGF2P01344 180 aa18.85■□□□□ 0.61
LIME1-203ENST00000465591 TSPAN19P0C672 248 aa18.85■□□□□ 0.61
LIME1-203ENST00000465591 PATE4P0C8F1 98 aa18.85■□□□□ 0.61
LIME1-203ENST00000465591 THRBP10828 461 aa18.85■□□□□ 0.61
LIME1-203ENST00000465591 ZNF14P17017 642 aaPredicted RBP18.85■□□□□ 0.61
LIME1-203ENST00000465591 DRD4P21917 467 aa18.85■□□□□ 0.61
LIME1-203ENST00000465591 NUDT2P50583 147 aa18.85■□□□□ 0.61
LIME1-203ENST00000465591 GSG1Q2KHT4 349 aa18.85■□□□□ 0.61
LIME1-203ENST00000465591 HACD2Q6Y1H2 254 aa18.85■□□□□ 0.61
LIME1-203ENST00000465591 MEX3DQ86XN8 651 aaKnown RBP18.85■□□□□ 0.61
LIME1-203ENST00000465591 SKA3Q8IX90 412 aa18.85■□□□□ 0.61
LIME1-203ENST00000465591 NUP37Q8NFH4 326 aa18.85■□□□□ 0.61
LIME1-203ENST00000465591 OR4F15Q8NGB8 312 aa18.85■□□□□ 0.61
LIME1-203ENST00000465591 LIPHQ8WWY8 451 aa18.85■□□□□ 0.61
LIME1-203ENST00000465591 HOPXQ9BPY8 73 aaPredicted RBP18.85■□□□□ 0.61
LIME1-203ENST00000465591 RHNO1Q9BSD3 238 aa18.85■□□□□ 0.61
LIME1-203ENST00000465591 EFCAB1Q9HAE3 211 aa18.85■□□□□ 0.61
LIME1-203ENST00000465591 RHCGQ9UBD6 479 aa18.85■□□□□ 0.61
LIME1-203ENST00000465591 AP3M1Q9Y2T2 418 aa18.85■□□□□ 0.61
LIME1-203ENST00000465591 MED31Q9Y3C7 131 aa18.85■□□□□ 0.61
LIME1-203ENST00000465591 PMF1-BGLAPU3KQ54 211 aa18.85■□□□□ 0.61
LIME1-203ENST00000465591 BCL10O95999 233 aa18.84■□□□□ 0.61
LIME1-203ENST00000465591 GIPRP48546 466 aa18.84■□□□□ 0.61
LIME1-203ENST00000465591 EFNA4P52798 201 aa18.84■□□□□ 0.61
LIME1-203ENST00000465591 MSMPQ1L6U9 139 aa18.84■□□□□ 0.61
LIME1-203ENST00000465591 ASB10Q8WXI3 467 aa18.84■□□□□ 0.61
LIME1-203ENST00000465591 ZNF347Q96SE7 839 aa18.84■□□□□ 0.61
LIME1-203ENST00000465591 B9A039 149 aa18.83■□□□□ 0.6
LIME1-203ENST00000465591 DHHO43323 396 aa18.83■□□□□ 0.6
LIME1-203ENST00000465591 GPRIN2O60269 458 aa18.83■□□□□ 0.6
LIME1-203ENST00000465591 PDE5AO76074 875 aa18.83■□□□□ 0.6
LIME1-203ENST00000465591 ZNF682O95780 498 aa18.83■□□□□ 0.6
LIME1-203ENST00000465591 QDPRP09417 244 aa18.83■□□□□ 0.6
LIME1-203ENST00000465591 NCK1P16333 377 aa18.83■□□□□ 0.6
LIME1-203ENST00000465591 PTDSS1P48651 473 aaKnown RBP18.83■□□□□ 0.6
LIME1-203ENST00000465591 SNRPD2P62316 118 aaKnown RBP18.83■□□□□ 0.6
LIME1-203ENST00000465591 MYBPC1Q00872 1141 aa18.83■□□□□ 0.6
LIME1-203ENST00000465591 ST3GAL3Q11203 375 aa18.83■□□□□ 0.6
LIME1-203ENST00000465591 LAPTM4AQ15012 233 aa18.83■□□□□ 0.6
LIME1-203ENST00000465591 EFNB3Q15768 340 aa18.83■□□□□ 0.6
LIME1-203ENST00000465591 HIST3H3Q16695 136 aa18.83■□□□□ 0.6
LIME1-203ENST00000465591 CLEC2AQ6UVW9 174 aa18.83■□□□□ 0.6
LIME1-203ENST00000465591 CBLL1Q75N03 491 aa18.83■□□□□ 0.6
LIME1-203ENST00000465591 TSEN54Q7Z6J9 526 aaKnown RBP18.83■□□□□ 0.6
LIME1-203ENST00000465591 ANKS4BQ8N8V4 417 aa18.83■□□□□ 0.6
LIME1-203ENST00000465591 RBM15BQ8NDT2 890 aaKnown RBP18.83■□□□□ 0.6
LIME1-203ENST00000465591 SEPHS2Q99611 448 aa18.83■□□□□ 0.6
LIME1-203ENST00000465591 MRPL13Q9BYD1 178 aaKnown RBP18.83■□□□□ 0.6
LIME1-203ENST00000465591 PLK3Q9H4B4 646 aa18.83■□□□□ 0.6
LIME1-203ENST00000465591 ZNF442Q9H7R0 627 aa18.83■□□□□ 0.6
LIME1-203ENST00000465591 INIPQ9NRY2 104 aa18.83■□□□□ 0.6
LIME1-203ENST00000465591 TMEM38BQ9NVV0 291 aa18.83■□□□□ 0.6
LIME1-203ENST00000465591 ABCD2Q9UBJ2 740 aa18.83■□□□□ 0.6
LIME1-203ENST00000465591 TMEM129A0AVI4 362 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms