RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 PINLYPA6NC86 204 aa2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 GOLGA8RI6L899 631 aa2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 L7N2F9 121 aa2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 RNF113AO15541 343 aaKnown RBP2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 PFDN1O60925 122 aa2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 OR5F1O95221 314 aa2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 SERPINA3P01011 423 aa2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 APOEP02649 317 aa2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 MMP1P03956 469 aa2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 IGHV4-34P06331 123 aa2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 CLTAP09496 248 aa2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 GIPP09681 153 aaPredicted RBP2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 CHTF8P0CG12 524 aa2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 PPIAL4FP0DN26 164 aa2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 SLC2A3P11169 496 aa2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 NR2C1P13056 603 aa2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 HPGDP15428 266 aa2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 MGMTP16455 207 aa2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 LONP1P36776 959 aaKnown RBP2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 HSPA13P48723 471 aa2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 ERVK-25P63136 954 aa2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 S100A12P80511 92 aa2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 ITGB3BPQ13352 177 aaPredicted RBP2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 CASP8Q14790 479 aa2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 TSC22D1Q15714 1073 aa2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 SSX2Q16385 188 aa2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 Q3ZCU0 254 aa2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 FBXO48Q5FWF7 155 aa2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 ZNF620Q6ZNG0 422 aa2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 COMTD1Q86VU5 262 aa2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 PAQR7Q86WK9 346 aa2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 ST13P4Q8IZP2 240 aaPredicted RBP2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 FAM71E2Q8N5Q1 922 aa2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 DNAAF3Q8N9W5 541 aa2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 ENKURQ8TC29 256 aa2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 SLC22A8Q8TCC7 542 aa2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 DDI1Q8WTU0 396 aa2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 ACOT11Q8WXI4 607 aaPredicted RBP2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 OPTNQ96CV9 577 aa2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 PLEKHA8Q96JA3 519 aa2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 FCRL1Q96LA6 429 aa2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 PANX2Q96RD6 677 aa2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 FMO2Q99518 471 aa2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 RASL11BQ9BPW5 248 aa2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 PELOQ9BRX2 385 aaKnown RBP2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 RIOK2Q9BVS4 552 aaKnown RBP2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 PKIBQ9C010 78 aa2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 OR11A1Q9GZK7 315 aa2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 C12orf10Q9HB07 376 aa2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 FANCEQ9HB96 536 aa2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 NT5MQ9NPB1 228 aa2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 C8orf4Q9NR00 106 aa2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 NUFIP1Q9UHK0 495 aaKnown RBP2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 ZNF225Q9UK10 706 aa2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 IKZF2Q9UKS7 526 aa2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 NCOA3Q9Y6Q9 1424 aa2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 THSD7BQ9C0I4 1608 aa2.5□□□□□ -2.01
HMGXB4-205ENST00000464480 TNIKQ9UKE5 1360 aa2.49□□□□□ -2.01
HMGXB4-205ENST00000464480 ZNF646O15015 1829 aaPredicted RBP2.49□□□□□ -2.01
HMGXB4-205ENST00000464480 TRAV6A0A075B6T7 132 aa2.49□□□□□ -2.01
HMGXB4-205ENST00000464480 GOLGA8QA0A0J9YX86 632 aa2.49□□□□□ -2.01
HMGXB4-205ENST00000464480 LOC100653049A0A140TA62 436 aa2.49□□□□□ -2.01
HMGXB4-205ENST00000464480 WI2-2373I1.2A0A1W2PRP0 233 aa2.49□□□□□ -2.01
HMGXB4-205ENST00000464480 GOLGA8OA6NCC3 632 aa2.49□□□□□ -2.01
HMGXB4-205ENST00000464480 SYCE1LA8MT33 242 aa2.49□□□□□ -2.01
HMGXB4-205ENST00000464480 C12orf71A8MTZ7 269 aa2.49□□□□□ -2.01
HMGXB4-205ENST00000464480 C12orf77C9JDV5 145 aa2.49□□□□□ -2.01
HMGXB4-205ENST00000464480 GOLGA8NF8WBI6 632 aa2.49□□□□□ -2.01
HMGXB4-205ENST00000464480 H3BQV1 296 aa2.49□□□□□ -2.01
HMGXB4-205ENST00000464480 GOLGA8MH3BSY2 632 aa2.49□□□□□ -2.01
HMGXB4-205ENST00000464480 KMOO15229 486 aa2.49□□□□□ -2.01
HMGXB4-205ENST00000464480 ZW10O43264 779 aa2.49□□□□□ -2.01
HMGXB4-205ENST00000464480 FAM189A1O60320 539 aa2.49□□□□□ -2.01
HMGXB4-205ENST00000464480 KRT34O76011 436 aa2.49□□□□□ -2.01
HMGXB4-205ENST00000464480 INSP01308 110 aa2.49□□□□□ -2.01
HMGXB4-205ENST00000464480 HLA-DRAP01903 254 aa2.49□□□□□ -2.01
HMGXB4-205ENST00000464480 KRT6AP02538 564 aa2.49□□□□□ -2.01
HMGXB4-205ENST00000464480 FGF1P05230 155 aa2.49□□□□□ -2.01
HMGXB4-205ENST00000464480 KRT7P08729 469 aa2.49□□□□□ -2.01
HMGXB4-205ENST00000464480 UBTFL6P0CB48 400 aaPredicted RBP2.49□□□□□ -2.01
HMGXB4-205ENST00000464480 CALM1P0DP23 149 aa2.49□□□□□ -2.01
HMGXB4-205ENST00000464480 CALM2P0DP24 149 aa2.49□□□□□ -2.01
HMGXB4-205ENST00000464480 CALM3P0DP25 149 aa2.49□□□□□ -2.01
HMGXB4-205ENST00000464480 ATP1B2P14415 290 aaPredicted RBP2.49□□□□□ -2.01
HMGXB4-205ENST00000464480 ETS2P15036 469 aa2.49□□□□□ -2.01
HMGXB4-205ENST00000464480 ZNF17P17021 662 aa2.49□□□□□ -2.01
HMGXB4-205ENST00000464480 EIF2S2P20042 333 aaKnown RBP2.49□□□□□ -2.01
HMGXB4-205ENST00000464480 PRKACBP22694 351 aa2.49□□□□□ -2.01
HMGXB4-205ENST00000464480 FDFT1P37268 417 aa2.49□□□□□ -2.01
HMGXB4-205ENST00000464480 CTRLP40313 264 aa2.49□□□□□ -2.01
HMGXB4-205ENST00000464480 CRYBB2P43320 205 aa2.49□□□□□ -2.01
HMGXB4-205ENST00000464480 CBX5P45973 191 aa2.49□□□□□ -2.01
HMGXB4-205ENST00000464480 TUFMP49411 452 aaKnown RBP2.49□□□□□ -2.01
HMGXB4-205ENST00000464480 TPMTP51580 245 aa2.49□□□□□ -2.01
HMGXB4-205ENST00000464480 ATP5IP56385 69 aaPredicted RBP2.49□□□□□ -2.01
HMGXB4-205ENST00000464480 VBP1P61758 197 aa2.49□□□□□ -2.01
HMGXB4-205ENST00000464480 CCNA1P78396 465 aa2.49□□□□□ -2.01
HMGXB4-205ENST00000464480 MRPS25P82663 173 aaKnown RBP2.49□□□□□ -2.01
HMGXB4-205ENST00000464480 GBE1Q04446 702 aa2.49□□□□□ -2.01
HMGXB4-205ENST00000464480 DNAJC3Q13217 504 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms