RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 PDGFAP04085 211 aa8.95□□□□□ -0.98
PTPRD-207ENST00000463477 IGKV3-11P04433 115 aa8.95□□□□□ -0.98
PTPRD-207ENST00000463477 IFNA16P05015 189 aa8.95□□□□□ -0.98
PTPRD-207ENST00000463477 MRPL3P09001 348 aaKnown RBP8.95□□□□□ -0.98
PTPRD-207ENST00000463477 ZNF19P17023 458 aa8.95□□□□□ -0.98
PTPRD-207ENST00000463477 ELK1P19419 428 aa8.95□□□□□ -0.98
PTPRD-207ENST00000463477 SHC1P29353 583 aa8.95□□□□□ -0.98
PTPRD-207ENST00000463477 SLC6A8P48029 635 aa8.95□□□□□ -0.98
PTPRD-207ENST00000463477 PGDP52209 483 aa8.95□□□□□ -0.98
PTPRD-207ENST00000463477 Q0VFX4 171 aa8.95□□□□□ -0.98
PTPRD-207ENST00000463477 MRPL28Q13084 256 aaKnown RBP8.95□□□□□ -0.98
PTPRD-207ENST00000463477 QPRTQ15274 297 aa8.95□□□□□ -0.98
PTPRD-207ENST00000463477 P2RY14Q15391 338 aa8.95□□□□□ -0.98
PTPRD-207ENST00000463477 NSDHLQ15738 373 aa8.95□□□□□ -0.98
PTPRD-207ENST00000463477 EMC4Q5J8M3 183 aa8.95□□□□□ -0.98
PTPRD-207ENST00000463477 SFXN4Q6P4A7 337 aa8.95□□□□□ -0.98
PTPRD-207ENST00000463477 IGFL3Q6UXB1 125 aa8.95□□□□□ -0.98
PTPRD-207ENST00000463477 UNQ9370/PRO34162Q6UXP9 181 aa8.95□□□□□ -0.98
PTPRD-207ENST00000463477 CPEB2Q7Z5Q1 589 aaKnown RBP8.95□□□□□ -0.98
PTPRD-207ENST00000463477 CEACAM19Q7Z692 300 aa8.95□□□□□ -0.98
PTPRD-207ENST00000463477 SLC35F2Q8IXU6 374 aa8.95□□□□□ -0.98
PTPRD-207ENST00000463477 LRRC75AQ8NAA5 344 aa8.95□□□□□ -0.98
PTPRD-207ENST00000463477 SLC7A6Q92536 515 aa8.95□□□□□ -0.98
PTPRD-207ENST00000463477 PELI1Q96FA3 418 aa8.95□□□□□ -0.98
PTPRD-207ENST00000463477 ST6GAL2Q96JF0 529 aa8.95□□□□□ -0.98
PTPRD-207ENST00000463477 LCORQ96JN0 433 aaPredicted RBP8.95□□□□□ -0.98
PTPRD-207ENST00000463477 ART5Q96L15 291 aa8.95□□□□□ -0.98
PTPRD-207ENST00000463477 IMMP1LQ96LU5 166 aa8.95□□□□□ -0.98
PTPRD-207ENST00000463477 OR2B2Q9GZK3 357 aa8.95□□□□□ -0.98
PTPRD-207ENST00000463477 NDEL1Q9GZM8 345 aa8.95□□□□□ -0.98
PTPRD-207ENST00000463477 LAT2Q9GZY6 243 aa8.95□□□□□ -0.98
PTPRD-207ENST00000463477 NEK6Q9HC98 313 aa8.95□□□□□ -0.98
PTPRD-207ENST00000463477 C19orf25Q9UFG5 118 aaPredicted RBP8.95□□□□□ -0.98
PTPRD-207ENST00000463477 MOKQ9UQ07 419 aa8.95□□□□□ -0.98
PTPRD-207ENST00000463477 ARPC4-TTLL3A0A0A6YYG9 625 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 A0A1W2PQD3 144 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 SMIM30A4D0T7 59 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 ELOA3DA6NLF2 546 aaPredicted RBP8.94□□□□□ -0.98
PTPRD-207ENST00000463477 SCDO00767 359 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 TO15178 435 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 ZNF264O43296 627 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 LYRM1O43325 122 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 SERPINA7P05543 415 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 CD14P08571 375 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 UCHL1P09936 223 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 SPI1P17947 270 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 ITGA3P26006 1051 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 PYCR1P32322 319 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 TALDO1P37837 337 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 NR4A2P43354 598 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 CLDN20P56880 219 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 SIRPAP78324 504 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 SLC3A1Q07837 685 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 KLRB1Q12918 225 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 PCOLCEQ15113 449 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 ELAVL1Q15717 326 aaKnown RBP8.94□□□□□ -0.98
PTPRD-207ENST00000463477 CARTPTQ16568 116 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 ZNF74Q16587 644 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 ELOA3BQ3SY89 546 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 ACSM3Q53FZ2 586 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 ATAD3CQ5T2N8 411 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 IDNKQ5T6J7 187 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 FCRLBQ6BAA4 426 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 PLET1Q6UQ28 207 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 BAIAP2L2Q6UXY1 529 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 SSX6Q7RTT6 188 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 FAM122BQ7Z309 247 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 KCTD20Q7Z5Y7 419 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 ANKRD37Q7Z713 158 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 C17orf47Q8NEP4 570 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 SDR9C7Q8NEX9 313 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 ELOA3Q8NG57 546 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 OR5J2Q8NH18 312 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 OR4K13Q8NH42 304 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 GHSRQ92847 366 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 ADIPOR1Q96A54 375 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 ZNF486Q96H40 463 aaPredicted RBP8.94□□□□□ -0.98
PTPRD-207ENST00000463477 MNTQ99583 582 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 MARVELD1Q9BSK0 173 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 TRAF4Q9BUZ4 470 aaPredicted RBP8.94□□□□□ -0.98
PTPRD-207ENST00000463477 PPIL3Q9H2H8 161 aaKnown RBP8.94□□□□□ -0.98
PTPRD-207ENST00000463477 ZNF160Q9HCG1 818 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 B3GAT2Q9NPZ5 323 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 ABRACLQ9P1F3 81 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 EXTL2Q9UBQ6 330 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 POU2F3Q9UKI9 436 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 DOCK10Q96BY6 2186 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 CPAMD8Q8IZJ3 1885 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 TCRBV16S1A1N1A0A5B0 115 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 HSPB2A8KAH6 182 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 NOTOA8MTQ0 251 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 FAM25AB3EWG3 89 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 FAM25CB3EWG5 89 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 FAM25GB3EWG6 89 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 DVL2O14641 736 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 SLC43A1O75387 559 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 UTS2O95399 124 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 DDAH2O95865 285 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 GYPBP06028 91 aa8.94□□□□□ -0.98
PTPRD-207ENST00000463477 ASAH2BP0C7U1 165 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms