RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 C6orf52Q5T4I8 152 aa7.92□□□□□ -1.14
BRCA1-207ENST00000461798 CARD17Q5XLA6 110 aa7.92□□□□□ -1.14
BRCA1-207ENST00000461798 CYB5R2Q6BCY4 276 aa7.92□□□□□ -1.14
BRCA1-207ENST00000461798 ERICH5Q6P6B1 374 aa7.92□□□□□ -1.14
BRCA1-207ENST00000461798 LRFN4Q6PJG9 635 aa7.92□□□□□ -1.14
BRCA1-207ENST00000461798 ZNF813Q6ZN06 617 aa7.92□□□□□ -1.14
BRCA1-207ENST00000461798 SLC35D2Q76EJ3 337 aa7.92□□□□□ -1.14
BRCA1-207ENST00000461798 PIWIL3Q7Z3Z3 882 aaKnown RBP7.92□□□□□ -1.14
BRCA1-207ENST00000461798 ZNF540Q8NDQ6 660 aa7.92□□□□□ -1.14
BRCA1-207ENST00000461798 OR6N1Q8NGY5 312 aa7.92□□□□□ -1.14
BRCA1-207ENST00000461798 SLC26A7Q8TE54 656 aa7.92□□□□□ -1.14
BRCA1-207ENST00000461798 NEU4Q8WWR8 484 aaPredicted RBP7.92□□□□□ -1.14
BRCA1-207ENST00000461798 LIPHQ8WWY8 451 aa7.92□□□□□ -1.14
BRCA1-207ENST00000461798 ZNF583Q96ND8 569 aa7.92□□□□□ -1.14
BRCA1-207ENST00000461798 POLR2J2Q9GZM3 115 aaKnown RBP7.92□□□□□ -1.14
BRCA1-207ENST00000461798 RAB1BQ9H0U4 201 aa7.92□□□□□ -1.14
BRCA1-207ENST00000461798 POLR2J3Q9H1A7 115 aaKnown RBP7.92□□□□□ -1.14
BRCA1-207ENST00000461798 NOX3Q9HBY0 568 aa7.92□□□□□ -1.14
BRCA1-207ENST00000461798 SAR1AQ9NR31 198 aa7.92□□□□□ -1.14
BRCA1-207ENST00000461798 NANSQ9NR45 359 aa7.92□□□□□ -1.14
BRCA1-207ENST00000461798 GLTPQ9NZD2 209 aa7.92□□□□□ -1.14
BRCA1-207ENST00000461798 ZNF224Q9NZL3 707 aa7.92□□□□□ -1.14
BRCA1-207ENST00000461798 FBXL3Q9UKT7 428 aa7.92□□□□□ -1.14
BRCA1-207ENST00000461798 BAG5Q9UL15 447 aa7.92□□□□□ -1.14
BRCA1-207ENST00000461798 HTR3EA5X5Y0 456 aa7.91□□□□□ -1.14
BRCA1-207ENST00000461798 BBIP1A8MTZ0 92 aa7.91□□□□□ -1.14
BRCA1-207ENST00000461798 CENPBD1B2RD01 187 aa7.91□□□□□ -1.14
BRCA1-207ENST00000461798 hCG_2039718K7EN88 272 aa7.91□□□□□ -1.14
BRCA1-207ENST00000461798 MGRN1O60291 552 aa7.91□□□□□ -1.14
BRCA1-207ENST00000461798 SEC14L2O76054 403 aa7.91□□□□□ -1.14
BRCA1-207ENST00000461798 UBL3O95164 117 aa7.91□□□□□ -1.14
BRCA1-207ENST00000461798 OR6A2O95222 327 aa7.91□□□□□ -1.14
BRCA1-207ENST00000461798 VIMP08670 466 aaKnown RBP7.91□□□□□ -1.14
BRCA1-207ENST00000461798 IGFBP1P08833 259 aaPredicted RBP7.91□□□□□ -1.14
BRCA1-207ENST00000461798 TSPAN19P0C672 248 aa7.91□□□□□ -1.14
BRCA1-207ENST00000461798 IGHV4-31P0DP07 118 aa7.91□□□□□ -1.14
BRCA1-207ENST00000461798 TROVE2P10155 538 aaKnown RBP eCLIP7.91□□□□□ -1.14
BRCA1-207ENST00000461798 THRBP10828 461 aa7.91□□□□□ -1.14
BRCA1-207ENST00000461798 GIFP27352 417 aa7.91□□□□□ -1.14
BRCA1-207ENST00000461798 GLRXP35754 106 aa7.91□□□□□ -1.14
BRCA1-207ENST00000461798 RBM34P42696 430 aaKnown RBP7.91□□□□□ -1.14
BRCA1-207ENST00000461798 GZMKP49863 264 aa7.91□□□□□ -1.14
BRCA1-207ENST00000461798 ARFIP2P53365 341 aa7.91□□□□□ -1.14
BRCA1-207ENST00000461798 BIDP55957 195 aa7.91□□□□□ -1.14
BRCA1-207ENST00000461798 RAB1AP62820 205 aa7.91□□□□□ -1.14
BRCA1-207ENST00000461798 DAG1Q14118 895 aa7.91□□□□□ -1.14
BRCA1-207ENST00000461798 MAPRE2Q15555 327 aa7.91□□□□□ -1.14
BRCA1-207ENST00000461798 HIST3H3Q16695 136 aa7.91□□□□□ -1.14
BRCA1-207ENST00000461798 CHRFAM7AQ494W8 412 aa7.91□□□□□ -1.14
BRCA1-207ENST00000461798 NRN1LQ496H8 165 aa7.91□□□□□ -1.14
BRCA1-207ENST00000461798 RABL3Q5HYI8 236 aa7.91□□□□□ -1.14
BRCA1-207ENST00000461798 VHLLQ6RSH7 139 aa7.91□□□□□ -1.14
BRCA1-207ENST00000461798 SLC46A3Q7Z3Q1 461 aa7.91□□□□□ -1.14
BRCA1-207ENST00000461798 LRRC17Q8N6Y2 441 aa7.91□□□□□ -1.14
BRCA1-207ENST00000461798 SPATA3Q8NHX4 192 aa7.91□□□□□ -1.14
BRCA1-207ENST00000461798 VANGL1Q8TAA9 524 aaPredicted RBP7.91□□□□□ -1.14
BRCA1-207ENST00000461798 SLC25A44Q96H78 314 aaPredicted RBP7.91□□□□□ -1.14
BRCA1-207ENST00000461798 FOXN4Q96NZ1 517 aa7.91□□□□□ -1.14
BRCA1-207ENST00000461798 SEPHS2Q99611 448 aa7.91□□□□□ -1.14
BRCA1-207ENST00000461798 FOXB1Q99853 325 aa7.91□□□□□ -1.14
BRCA1-207ENST00000461798 VRK1Q99986 396 aaPredicted RBP7.91□□□□□ -1.14
BRCA1-207ENST00000461798 ECSITQ9BQ95 431 aa7.91□□□□□ -1.14
BRCA1-207ENST00000461798 PIMREGQ9BSJ6 248 aa7.91□□□□□ -1.14
BRCA1-207ENST00000461798 ULBP2Q9BZM5 246 aa7.91□□□□□ -1.14
BRCA1-207ENST00000461798 MEPEQ9NQ76 525 aaPredicted RBP7.91□□□□□ -1.14
BRCA1-207ENST00000461798 SLC7A7Q9UM01 511 aa7.91□□□□□ -1.14
BRCA1-207ENST00000461798 CMAHPQ9Y471 501 aa7.91□□□□□ -1.14
BRCA1-207ENST00000461798 C11orf98E9PRG8 122 aa7.9□□□□□ -1.14
BRCA1-207ENST00000461798 SLC22A2O15244 555 aa7.9□□□□□ -1.14
BRCA1-207ENST00000461798 DHHO43323 396 aa7.9□□□□□ -1.14
BRCA1-207ENST00000461798 RNF13O43567 381 aa7.9□□□□□ -1.14
BRCA1-207ENST00000461798 ENTPD5O75356 428 aa7.9□□□□□ -1.14
BRCA1-207ENST00000461798 OR5F1O95221 314 aa7.9□□□□□ -1.14
BRCA1-207ENST00000461798 STAMBPO95630 424 aa7.9□□□□□ -1.14
BRCA1-207ENST00000461798 IFNA2P01563 188 aa7.9□□□□□ -1.14
BRCA1-207ENST00000461798 IFNA14P01570 189 aa7.9□□□□□ -1.14
BRCA1-207ENST00000461798 MT-ND1P03886 318 aa7.9□□□□□ -1.14
BRCA1-207ENST00000461798 HIST1H2ABP04908 130 aa7.9□□□□□ -1.14
BRCA1-207ENST00000461798 SERPINA5P05154 406 aa7.9□□□□□ -1.14
BRCA1-207ENST00000461798 FAM157CP0CG43 387 aa7.9□□□□□ -1.14
BRCA1-207ENST00000461798 PGA4P0DJD7 388 aa7.9□□□□□ -1.14
BRCA1-207ENST00000461798 PGA3P0DJD8 388 aa7.9□□□□□ -1.14
BRCA1-207ENST00000461798 B4GALT1P15291 398 aa7.9□□□□□ -1.14
BRCA1-207ENST00000461798 FUT1P19526 365 aa7.9□□□□□ -1.14
BRCA1-207ENST00000461798 KDELR2P33947 212 aa7.9□□□□□ -1.14
BRCA1-207ENST00000461798 THBS2P35442 1172 aa7.9□□□□□ -1.14
BRCA1-207ENST00000461798 CAPZA2P47755 286 aa7.9□□□□□ -1.14
BRCA1-207ENST00000461798 GIPRP48546 466 aa7.9□□□□□ -1.14
BRCA1-207ENST00000461798 ZNF133P52736 654 aaPredicted RBP7.9□□□□□ -1.14
BRCA1-207ENST00000461798 PIGFQ07326 219 aa7.9□□□□□ -1.14
BRCA1-207ENST00000461798 NPRL3Q12980 569 aa7.9□□□□□ -1.14
BRCA1-207ENST00000461798 SNTB2Q13425 540 aaKnown RBP7.9□□□□□ -1.14
BRCA1-207ENST00000461798 FXNQ16595 210 aa7.9□□□□□ -1.14
BRCA1-207ENST00000461798 CGB2Q6NT52 195 aa7.9□□□□□ -1.14
BRCA1-207ENST00000461798 PODNL1Q6PEZ8 512 aa7.9□□□□□ -1.14
BRCA1-207ENST00000461798 HIST3H2AQ7L7L0 130 aa7.9□□□□□ -1.14
BRCA1-207ENST00000461798 CXXC5Q7LFL8 322 aaKnown RBP7.9□□□□□ -1.14
BRCA1-207ENST00000461798 SPATA21Q7Z572 469 aa7.9□□□□□ -1.14
BRCA1-207ENST00000461798 DPPA2Q7Z7J5 298 aa7.9□□□□□ -1.14
BRCA1-207ENST00000461798 CARM1Q86X55 608 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms