RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 C20orf141Q9NUB4 165 aa16.4■□□□□ 0.22
COL5A1-203ENST00000460264 GLTPQ9NZD2 209 aa16.4■□□□□ 0.22
COL5A1-203ENST00000460264 AP3M1Q9Y2T2 418 aa16.4■□□□□ 0.22
COL5A1-203ENST00000460264 CHD3Q12873 2000 aaKnown RBP16.4■□□□□ 0.22
COL5A1-203ENST00000460264 B9A039 149 aa16.39■□□□□ 0.21
COL5A1-203ENST00000460264 BLOC1S5-TXNDC5H3BN57 136 aa16.39■□□□□ 0.21
COL5A1-203ENST00000460264 OR7A10O76100 309 aa16.39■□□□□ 0.21
COL5A1-203ENST00000460264 LY6HO94772 140 aa16.39■□□□□ 0.21
COL5A1-203ENST00000460264 IGF2P01344 180 aa16.39■□□□□ 0.21
COL5A1-203ENST00000460264 PGA4P0DJD7 388 aa16.39■□□□□ 0.21
COL5A1-203ENST00000460264 PGA3P0DJD8 388 aa16.39■□□□□ 0.21
COL5A1-203ENST00000460264 PPP2R2BQ00005 443 aa16.39■□□□□ 0.21
COL5A1-203ENST00000460264 RPL18Q07020 188 aaKnown RBP16.39■□□□□ 0.21
COL5A1-203ENST00000460264 TREML1Q86YW5 311 aa16.39■□□□□ 0.21
COL5A1-203ENST00000460264 IL17RDQ8NFM7 739 aa16.39■□□□□ 0.21
COL5A1-203ENST00000460264 TMEM239Q8WW34 195 aa16.39■□□□□ 0.21
COL5A1-203ENST00000460264 ZNF566Q969W8 418 aa16.39■□□□□ 0.21
COL5A1-203ENST00000460264 ZNF75AQ96N20 296 aa16.39■□□□□ 0.21
COL5A1-203ENST00000460264 SORCS2Q96PQ0 1159 aa16.39■□□□□ 0.21
COL5A1-203ENST00000460264 NME4O00746 187 aa16.38■□□□□ 0.21
COL5A1-203ENST00000460264 F12P00748 615 aaPredicted RBP16.38■□□□□ 0.21
COL5A1-203ENST00000460264 ZNF14P17017 642 aaPredicted RBP16.38■□□□□ 0.21
COL5A1-203ENST00000460264 THBS4P35443 961 aa16.38■□□□□ 0.21
COL5A1-203ENST00000460264 SLC7A2P52569 658 aa16.38■□□□□ 0.21
COL5A1-203ENST00000460264 SELENOWP63302 87 aa16.38■□□□□ 0.21
COL5A1-203ENST00000460264 LIPEQ05469 1076 aa16.38■□□□□ 0.21
COL5A1-203ENST00000460264 PIGFQ07326 219 aa16.38■□□□□ 0.21
COL5A1-203ENST00000460264 C8orf82Q6P1X6 216 aaPredicted RBP16.38■□□□□ 0.21
COL5A1-203ENST00000460264 LRFN4Q6PJG9 635 aa16.38■□□□□ 0.21
COL5A1-203ENST00000460264 NANOS1Q8WY41 292 aaKnown RBP16.38■□□□□ 0.21
COL5A1-203ENST00000460264 FAM168AQ92567 244 aa16.38■□□□□ 0.21
COL5A1-203ENST00000460264 SGTBQ96EQ0 304 aa16.38■□□□□ 0.21
COL5A1-203ENST00000460264 MS4A3Q96HJ5 214 aa16.38■□□□□ 0.21
COL5A1-203ENST00000460264 PRRC1Q96M27 445 aa16.38■□□□□ 0.21
COL5A1-203ENST00000460264 PLK3Q9H4B4 646 aa16.38■□□□□ 0.21
COL5A1-203ENST00000460264 A4GNTQ9UNA3 340 aa16.38■□□□□ 0.21
COL5A1-203ENST00000460264 MED31Q9Y3C7 131 aa16.38■□□□□ 0.21
COL5A1-203ENST00000460264 BCL10O95999 233 aa16.37■□□□□ 0.21
COL5A1-203ENST00000460264 IGHG1P01857 330 aa16.37■□□□□ 0.21
COL5A1-203ENST00000460264 TP53P04637 393 aaPredicted RBP16.37■□□□□ 0.21
COL5A1-203ENST00000460264 F13BP05160 661 aa16.37■□□□□ 0.21
COL5A1-203ENST00000460264 CSF3P09919 207 aa16.37■□□□□ 0.21
COL5A1-203ENST00000460264 TSPAN19P0C672 248 aa16.37■□□□□ 0.21
COL5A1-203ENST00000460264 FUT1P19526 365 aa16.37■□□□□ 0.21
COL5A1-203ENST00000460264 NPR2P20594 1047 aa16.37■□□□□ 0.21
COL5A1-203ENST00000460264 PTDSS1P48651 473 aaKnown RBP16.37■□□□□ 0.21
COL5A1-203ENST00000460264 SNTB2Q13425 540 aaKnown RBP16.37■□□□□ 0.21
COL5A1-203ENST00000460264 PIWIL3Q7Z3Z3 882 aaKnown RBP16.37■□□□□ 0.21
COL5A1-203ENST00000460264 SPATA21Q7Z572 469 aa16.37■□□□□ 0.21
COL5A1-203ENST00000460264 VTCN1Q7Z7D3 282 aa16.37■□□□□ 0.21
COL5A1-203ENST00000460264 C10orf105Q8TEF2 133 aa16.37■□□□□ 0.21
COL5A1-203ENST00000460264 LIPHQ8WWY8 451 aa16.37■□□□□ 0.21
COL5A1-203ENST00000460264 LZICQ8WZA0 190 aa16.37■□□□□ 0.21
COL5A1-203ENST00000460264 DENND2DQ9H6A0 471 aaPredicted RBP16.37■□□□□ 0.21
COL5A1-203ENST00000460264 TMEM38BQ9NVV0 291 aa16.37■□□□□ 0.21
COL5A1-203ENST00000460264 FKBP7Q9Y680 259 aa16.37■□□□□ 0.21
COL5A1-203ENST00000460264 A0A1W2PRG6 482 aa16.36■□□□□ 0.21
COL5A1-203ENST00000460264 DHHO43323 396 aa16.36■□□□□ 0.21
COL5A1-203ENST00000460264 ATP8B1O43520 1251 aa16.36■□□□□ 0.21
COL5A1-203ENST00000460264 CD5LO43866 347 aa16.36■□□□□ 0.21
COL5A1-203ENST00000460264 PIP5K1CO60331 668 aa16.36■□□□□ 0.21
COL5A1-203ENST00000460264 UBL3O95164 117 aa16.36■□□□□ 0.21
COL5A1-203ENST00000460264 SLC25A16P16260 332 aa16.36■□□□□ 0.21
COL5A1-203ENST00000460264 AQP2P41181 271 aa16.36■□□□□ 0.21
COL5A1-203ENST00000460264 GIPRP48546 466 aa16.36■□□□□ 0.21
COL5A1-203ENST00000460264 PPOXP50336 477 aa16.36■□□□□ 0.21
COL5A1-203ENST00000460264 NUDT2P50583 147 aa16.36■□□□□ 0.21
COL5A1-203ENST00000460264 RAB1AP62820 205 aa16.36■□□□□ 0.21
COL5A1-203ENST00000460264 RUNX1T1Q06455 604 aa16.36■□□□□ 0.21
COL5A1-203ENST00000460264 ST3GAL3Q11203 375 aa16.36■□□□□ 0.21
COL5A1-203ENST00000460264 DAG1Q14118 895 aa16.36■□□□□ 0.21
COL5A1-203ENST00000460264 HIST3H3Q16695 136 aa16.36■□□□□ 0.21
COL5A1-203ENST00000460264 KRT80Q6KB66 452 aa16.36■□□□□ 0.21
COL5A1-203ENST00000460264 HACD2Q6Y1H2 254 aa16.36■□□□□ 0.21
COL5A1-203ENST00000460264 SKA3Q8IX90 412 aa16.36■□□□□ 0.21
COL5A1-203ENST00000460264 SLC22A24Q8N4F4 322 aa16.36■□□□□ 0.21
COL5A1-203ENST00000460264 ANKS4BQ8N8V4 417 aa16.36■□□□□ 0.21
COL5A1-203ENST00000460264 NOXO1Q8NFA2 376 aa16.36■□□□□ 0.21
COL5A1-203ENST00000460264 ASB10Q8WXI3 467 aa16.36■□□□□ 0.21
COL5A1-203ENST00000460264 SEPHS2Q99611 448 aa16.36■□□□□ 0.21
COL5A1-203ENST00000460264 HOPXQ9BPY8 73 aaPredicted RBP16.36■□□□□ 0.21
COL5A1-203ENST00000460264 EFCAB1Q9HAE3 211 aa16.36■□□□□ 0.21
COL5A1-203ENST00000460264 INIPQ9NRY2 104 aa16.36■□□□□ 0.21
COL5A1-203ENST00000460264 MCIDASD6RGH6 385 aa16.35■□□□□ 0.21
COL5A1-203ENST00000460264 hCG_2039718K7EN88 272 aa16.35■□□□□ 0.21
COL5A1-203ENST00000460264 CXCR6O00574 342 aa16.35■□□□□ 0.21
COL5A1-203ENST00000460264 GPRIN2O60269 458 aa16.35■□□□□ 0.21
COL5A1-203ENST00000460264 ENTPD5O75356 428 aa16.35■□□□□ 0.21
COL5A1-203ENST00000460264 RAB36O95755 333 aa16.35■□□□□ 0.21
COL5A1-203ENST00000460264 IFNW1P05000 195 aa16.35■□□□□ 0.21
COL5A1-203ENST00000460264 QDPRP09417 244 aa16.35■□□□□ 0.21
COL5A1-203ENST00000460264 ZNF35P13682 527 aa16.35■□□□□ 0.21
COL5A1-203ENST00000460264 FUT4P22083 530 aa16.35■□□□□ 0.21
COL5A1-203ENST00000460264 NR4A1P22736 598 aa16.35■□□□□ 0.21
COL5A1-203ENST00000460264 GSK3BP49841 420 aa16.35■□□□□ 0.21
COL5A1-203ENST00000460264 DAP3P51398 398 aaKnown RBP16.35■□□□□ 0.21
COL5A1-203ENST00000460264 CLRN1P58418 232 aa16.35■□□□□ 0.21
COL5A1-203ENST00000460264 LOXL1Q08397 574 aaPredicted RBP16.35■□□□□ 0.21
COL5A1-203ENST00000460264 OFCC1Q8IZS5 231 aa16.35■□□□□ 0.21
COL5A1-203ENST00000460264 SVOPLQ8N434 492 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms