RNA–Protein interactions for RNA: ENST00000459902.1

CKAP2-204, Transcript of cytoskeleton associated protein 2, humanhuman

TSL 2

Gene CKAP2, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-204ENST00000459902 PIGLQ9Y2B2 252 aa3.7□□□□□ -1.82
CKAP2-204ENST00000459902 NOSIPQ9Y314 301 aaKnown RBP3.7□□□□□ -1.82
CKAP2-204ENST00000459902 BRD4O60885 1362 aaPredicted RBP3.7□□□□□ -1.82
CKAP2-204ENST00000459902 TMEM94Q12767 1356 aa3.7□□□□□ -1.82
CKAP2-204ENST00000459902 DCAF1Q9Y4B6 1507 aa3.7□□□□□ -1.82
CKAP2-204ENST00000459902 IGLV11-55A0A075B6I3 123 aa3.69□□□□□ -1.82
CKAP2-204ENST00000459902 IGKV1D-13A0A0B4J2D9 117 aa3.69□□□□□ -1.82
CKAP2-204ENST00000459902 PLAC8L1A1L4L8 177 aa3.69□□□□□ -1.82
CKAP2-204ENST00000459902 H3BNH8 94 aa3.69□□□□□ -1.82
CKAP2-204ENST00000459902 GOLGA8SH3BPF8 625 aa3.69□□□□□ -1.82
CKAP2-204ENST00000459902 IGHV2-5P01817 119 aa3.69□□□□□ -1.82
CKAP2-204ENST00000459902 FGF1P05230 155 aa3.69□□□□□ -1.82
CKAP2-204ENST00000459902 IGKV1-13P0DP09 117 aa3.69□□□□□ -1.82
CKAP2-204ENST00000459902 TCN1P20061 433 aaPredicted RBP3.69□□□□□ -1.82
CKAP2-204ENST00000459902 CD9P21926 228 aa3.69□□□□□ -1.82
CKAP2-204ENST00000459902 SLC2A5P22732 501 aa3.69□□□□□ -1.82
CKAP2-204ENST00000459902 CEBPDP49716 269 aaPredicted RBP3.69□□□□□ -1.82
CKAP2-204ENST00000459902 DEFB116Q30KQ4 102 aa3.69□□□□□ -1.82
CKAP2-204ENST00000459902 TRIM40Q6P9F5 258 aa3.69□□□□□ -1.82
CKAP2-204ENST00000459902 LYPD2Q6UXB3 125 aa3.69□□□□□ -1.82
CKAP2-204ENST00000459902 PCP2Q8IVA1 136 aa3.69□□□□□ -1.82
CKAP2-204ENST00000459902 SUN5Q8TC36 379 aa3.69□□□□□ -1.82
CKAP2-204ENST00000459902 ACTRT1Q8TDG2 376 aa3.69□□□□□ -1.82
CKAP2-204ENST00000459902 GON7Q9BXV9 100 aa3.69□□□□□ -1.82
CKAP2-204ENST00000459902 LCE3DQ9BYE3 92 aa3.69□□□□□ -1.82
CKAP2-204ENST00000459902 ANKRD19PQ9H560 264 aa3.69□□□□□ -1.82
CKAP2-204ENST00000459902 MED4Q9NPJ6 270 aa3.69□□□□□ -1.82
CKAP2-204ENST00000459902 PACSIN2Q9UNF0 486 aaPredicted RBP3.69□□□□□ -1.82
CKAP2-204ENST00000459902 AKNAQ7Z591 1439 aa3.69□□□□□ -1.82
CKAP2-204ENST00000459902 MSH6P52701 1360 aa3.68□□□□□ -1.82
CKAP2-204ENST00000459902 PPIAL4EA0A075B759 164 aa3.68□□□□□ -1.82
CKAP2-204ENST00000459902 PRSS37A4D1T9 235 aa3.68□□□□□ -1.82
CKAP2-204ENST00000459902 ERVV-1B6SEH8 477 aa3.68□□□□□ -1.82
CKAP2-204ENST00000459902 F8VZ95 297 aa3.68□□□□□ -1.82
CKAP2-204ENST00000459902 H0YHG0 523 aa3.68□□□□□ -1.82
CKAP2-204ENST00000459902 MED6O75586 246 aa3.68□□□□□ -1.82
CKAP2-204ENST00000459902 UPK3AO75631 287 aa3.68□□□□□ -1.82
CKAP2-204ENST00000459902 SNX4O95219 450 aa3.68□□□□□ -1.82
CKAP2-204ENST00000459902 WISP3O95389 354 aaPredicted RBP3.68□□□□□ -1.82
CKAP2-204ENST00000459902 UBTFL1P0CB47 393 aaPredicted RBP3.68□□□□□ -1.82
CKAP2-204ENST00000459902 PPIAL4FP0DN26 164 aa3.68□□□□□ -1.82
CKAP2-204ENST00000459902 ZNF30P17039 623 aa3.68□□□□□ -1.82
CKAP2-204ENST00000459902 GPR6P46095 362 aaPredicted RBP3.68□□□□□ -1.82
CKAP2-204ENST00000459902 AQP6Q13520 282 aa3.68□□□□□ -1.82
CKAP2-204ENST00000459902 CAVIN4Q5BKX8 364 aa3.68□□□□□ -1.82
CKAP2-204ENST00000459902 COA6Q5JTJ3 125 aaKnown RBP3.68□□□□□ -1.82
CKAP2-204ENST00000459902 EFL1Q7Z2Z2 1120 aaKnown RBP3.68□□□□□ -1.82
CKAP2-204ENST00000459902 ZNF679Q8IYX0 411 aa3.68□□□□□ -1.82
CKAP2-204ENST00000459902 ZCCHC7Q8N3Z6 543 aaKnown RBP3.68□□□□□ -1.82
CKAP2-204ENST00000459902 BHLHE23Q8NDY6 225 aa3.68□□□□□ -1.82
CKAP2-204ENST00000459902 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.68□□□□□ -1.82
CKAP2-204ENST00000459902 OR8B4Q96RC9 309 aa3.68□□□□□ -1.82
CKAP2-204ENST00000459902 SORT1Q99523 831 aa3.68□□□□□ -1.82
CKAP2-204ENST00000459902 CDHR2Q9BYE9 1310 aa3.68□□□□□ -1.82
CKAP2-204ENST00000459902 IGKV2-28A0A075B6P5 120 aa3.67□□□□□ -1.82
CKAP2-204ENST00000459902 CLRN2A0PK11 232 aa3.67□□□□□ -1.82
CKAP2-204ENST00000459902 ANGPTL7O43827 346 aa3.67□□□□□ -1.82
CKAP2-204ENST00000459902 MGRN1O60291 552 aa3.67□□□□□ -1.82
CKAP2-204ENST00000459902 SPAG7O75391 227 aa3.67□□□□□ -1.82
CKAP2-204ENST00000459902 SURF6O75683 361 aaKnown RBP3.67□□□□□ -1.82
CKAP2-204ENST00000459902 FGFR1OPO95684 399 aaKnown RBP3.67□□□□□ -1.82
CKAP2-204ENST00000459902 IGKV2D-28P01615 120 aa3.67□□□□□ -1.82
CKAP2-204ENST00000459902 GAPDHP04406 335 aaKnown RBP3.67□□□□□ -1.82
CKAP2-204ENST00000459902 SUB1P53999 127 aaKnown RBP eCLIP3.67□□□□□ -1.82
CKAP2-204ENST00000459902 SEC61GP60059 68 aa3.67□□□□□ -1.82
CKAP2-204ENST00000459902 ACTR1AP61163 376 aa3.67□□□□□ -1.82
CKAP2-204ENST00000459902 HMGCS1Q01581 520 aa3.67□□□□□ -1.82
CKAP2-204ENST00000459902 TRDNQ13061 729 aa3.67□□□□□ -1.82
CKAP2-204ENST00000459902 EIF4EBP1Q13541 118 aaPredicted RBP3.67□□□□□ -1.82
CKAP2-204ENST00000459902 PPP1R7Q15435 360 aa3.67□□□□□ -1.82
CKAP2-204ENST00000459902 ZNF77Q15935 545 aa3.67□□□□□ -1.82
CKAP2-204ENST00000459902 ZSCAN26Q16670 478 aa3.67□□□□□ -1.82
CKAP2-204ENST00000459902 ZBED5Q49AG3 693 aa3.67□□□□□ -1.82
CKAP2-204ENST00000459902 LRRC31Q6UY01 552 aa3.67□□□□□ -1.82
CKAP2-204ENST00000459902 LINC00173Q6ZV60 143 aa3.67□□□□□ -1.82
CKAP2-204ENST00000459902 OR52K2Q8NGK3 314 aa3.67□□□□□ -1.82
CKAP2-204ENST00000459902 CD300LFQ8TDQ1 290 aa3.67□□□□□ -1.82
CKAP2-204ENST00000459902 SGK3Q96BR1 496 aa3.67□□□□□ -1.82
CKAP2-204ENST00000459902 MED8Q96G25 268 aa3.67□□□□□ -1.82
CKAP2-204ENST00000459902 FOPNLQ96NB1 174 aa3.67□□□□□ -1.82
CKAP2-204ENST00000459902 NPY6RQ99463 290 aa3.67□□□□□ -1.82
CKAP2-204ENST00000459902 VPS37BQ9H9H4 285 aa3.67□□□□□ -1.82
CKAP2-204ENST00000459902 UGT1A7Q9HAW7 530 aa3.67□□□□□ -1.82
CKAP2-204ENST00000459902 UGT1A10Q9HAW8 530 aa3.67□□□□□ -1.82
CKAP2-204ENST00000459902 UGT1A8Q9HAW9 530 aa3.67□□□□□ -1.82
CKAP2-204ENST00000459902 TM9SF3Q9HD45 589 aa3.67□□□□□ -1.82
CKAP2-204ENST00000459902 NFASCO94856 1347 aa3.67□□□□□ -1.82
CKAP2-204ENST00000459902 A0A1B0GVI7 797 aa3.66□□□□□ -1.82
CKAP2-204ENST00000459902 HAS3O00219 553 aa3.66□□□□□ -1.82
CKAP2-204ENST00000459902 FOXE1O00358 373 aaPredicted RBP3.66□□□□□ -1.82
CKAP2-204ENST00000459902 XKRYO14609 159 aa3.66□□□□□ -1.82
CKAP2-204ENST00000459902 POLR3GO15318 223 aaPredicted RBP3.66□□□□□ -1.82
CKAP2-204ENST00000459902 AIREO43918 545 aa3.66□□□□□ -1.82
CKAP2-204ENST00000459902 PAHP00439 452 aa3.66□□□□□ -1.82
CKAP2-204ENST00000459902 BGLAPP02818 100 aa3.66□□□□□ -1.82
CKAP2-204ENST00000459902 PBLDP30039 288 aaPredicted RBP3.66□□□□□ -1.82
CKAP2-204ENST00000459902 YAP1P46937 504 aaKnown RBP3.66□□□□□ -1.82
CKAP2-204ENST00000459902 SLAQ13239 276 aa3.66□□□□□ -1.82
CKAP2-204ENST00000459902 C16orf72Q14CZ0 275 aa3.66□□□□□ -1.82
CKAP2-204ENST00000459902 ANGPTL8Q6UXH0 198 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms