RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 HSD17B1P14061 328 aa16.29■□□□□ 0.2
USP39-209ENST00000458268 DAP3P51398 398 aaKnown RBP16.29■□□□□ 0.2
USP39-209ENST00000458268 PGGHGQ32M88 737 aa16.29■□□□□ 0.2
USP39-209ENST00000458268 SHEQ5VZ18 495 aa16.29■□□□□ 0.2
USP39-209ENST00000458268 NHLRC1Q6VVB1 395 aa16.29■□□□□ 0.2
USP39-209ENST00000458268 CYP2R1Q6VVX0 501 aa16.29■□□□□ 0.2
USP39-209ENST00000458268 MDP1Q86V88 176 aa16.29■□□□□ 0.2
USP39-209ENST00000458268 FBXL14Q8N1E6 418 aa16.29■□□□□ 0.2
USP39-209ENST00000458268 ACOT11Q8WXI4 607 aaPredicted RBP16.29■□□□□ 0.2
USP39-209ENST00000458268 MCUR1Q96AQ8 359 aa16.29■□□□□ 0.2
USP39-209ENST00000458268 SLC25A44Q96H78 314 aaPredicted RBP16.29■□□□□ 0.2
USP39-209ENST00000458268 FAM46AQ96IP4 442 aaKnown RBP16.29■□□□□ 0.2
USP39-209ENST00000458268 LRR1Q96L50 414 aa16.29■□□□□ 0.2
USP39-209ENST00000458268 ZNF347Q96SE7 839 aa16.29■□□□□ 0.2
USP39-209ENST00000458268 FOXB1Q99853 325 aa16.29■□□□□ 0.2
USP39-209ENST00000458268 NMNAT1Q9HAN9 279 aaPredicted RBP16.29■□□□□ 0.2
USP39-209ENST00000458268 HIVEP1P15822 2718 aa16.28■□□□□ 0.2
USP39-209ENST00000458268 ZNF503-AS2A6NEH8 195 aa16.28■□□□□ 0.2
USP39-209ENST00000458268 CRYAAP02489 173 aa16.28■□□□□ 0.2
USP39-209ENST00000458268 QDPRP09417 244 aa16.28■□□□□ 0.2
USP39-209ENST00000458268 CECR9P0C854 216 aa16.28■□□□□ 0.2
USP39-209ENST00000458268 DANCRP0C864 163 aa16.28■□□□□ 0.2
USP39-209ENST00000458268 VLDLRP98155 873 aa16.28■□□□□ 0.2
USP39-209ENST00000458268 SPIBQ01892 262 aa16.28■□□□□ 0.2
USP39-209ENST00000458268 RUNX1T1Q06455 604 aa16.28■□□□□ 0.2
USP39-209ENST00000458268 CD47Q08722 323 aa16.28■□□□□ 0.2
USP39-209ENST00000458268 AGAP6Q5VW22 663 aa16.28■□□□□ 0.2
USP39-209ENST00000458268 RINLQ6ZS11 566 aa16.28■□□□□ 0.2
USP39-209ENST00000458268 OAFQ86UD1 273 aa16.28■□□□□ 0.2
USP39-209ENST00000458268 MYPOPQ86VE0 399 aaPredicted RBP16.28■□□□□ 0.2
USP39-209ENST00000458268 NOXO1Q8NFA2 376 aa16.28■□□□□ 0.2
USP39-209ENST00000458268 MAGEE2Q8TD90 523 aaPredicted RBP16.28■□□□□ 0.2
USP39-209ENST00000458268 ASB10Q8WXI3 467 aa16.28■□□□□ 0.2
USP39-209ENST00000458268 NANOS1Q8WY41 292 aaKnown RBP16.28■□□□□ 0.2
USP39-209ENST00000458268 TMEM54Q969K7 222 aa16.28■□□□□ 0.2
USP39-209ENST00000458268 PYURFQ96I23 114 aa16.28■□□□□ 0.2
USP39-209ENST00000458268 DHRS9Q9BPW9 319 aa16.28■□□□□ 0.2
USP39-209ENST00000458268 PLCE1Q9P212 2302 aa16.28■□□□□ 0.2
USP39-209ENST00000458268 SMAD7O15105 426 aaKnown RBP16.27■□□□□ 0.2
USP39-209ENST00000458268 PDE5AO76074 875 aa16.27■□□□□ 0.2
USP39-209ENST00000458268 PRSS23O95084 383 aa16.27■□□□□ 0.2
USP39-209ENST00000458268 PATE4P0C8F1 98 aa16.27■□□□□ 0.2
USP39-209ENST00000458268 PGA4P0DJD7 388 aa16.27■□□□□ 0.2
USP39-209ENST00000458268 PGA3P0DJD8 388 aa16.27■□□□□ 0.2
USP39-209ENST00000458268 RPL4P36578 427 aaKnown RBP16.27■□□□□ 0.2
USP39-209ENST00000458268 PTDSS1P48651 473 aaKnown RBP16.27■□□□□ 0.2
USP39-209ENST00000458268 CTXN1P60606 82 aa16.27■□□□□ 0.2
USP39-209ENST00000458268 PRKCDQ05655 676 aa16.27■□□□□ 0.2
USP39-209ENST00000458268 PODNL1Q6PEZ8 512 aa16.27■□□□□ 0.2
USP39-209ENST00000458268 MBOAT2Q6ZWT7 520 aa16.27■□□□□ 0.2
USP39-209ENST00000458268 TSEN54Q7Z6J9 526 aaKnown RBP16.27■□□□□ 0.2
USP39-209ENST00000458268 KRTAP1-3Q8IUG1 177 aa16.27■□□□□ 0.2
USP39-209ENST00000458268 LRRC75A-AS1Q8N1F1 130 aa16.27■□□□□ 0.2
USP39-209ENST00000458268 MUC15Q8N387 334 aa16.27■□□□□ 0.2
USP39-209ENST00000458268 BCAS4Q8TDM0 211 aa16.27■□□□□ 0.2
USP39-209ENST00000458268 FBXO17Q96EF6 278 aa16.27■□□□□ 0.2
USP39-209ENST00000458268 TRMT61AQ96FX7 289 aaKnown RBP16.27■□□□□ 0.2
USP39-209ENST00000458268 TNFRSF13CQ96RJ3 184 aa16.27■□□□□ 0.2
USP39-209ENST00000458268 SEPHS2Q99611 448 aa16.27■□□□□ 0.2
USP39-209ENST00000458268 TRAF4Q9BUZ4 470 aaPredicted RBP16.27■□□□□ 0.2
USP39-209ENST00000458268 GORASP2Q9H8Y8 452 aa16.27■□□□□ 0.2
USP39-209ENST00000458268 NDUFAF4Q9P032 175 aa16.27■□□□□ 0.2
USP39-209ENST00000458268 CD300AQ9UGN4 299 aa16.27■□□□□ 0.2
USP39-209ENST00000458268 MAP1AP78559 2803 aaPredicted RBP16.27■□□□□ 0.19
USP39-209ENST00000458268 DHHO43323 396 aa16.26■□□□□ 0.19
USP39-209ENST00000458268 TRMUO75648 421 aaKnown RBP16.26■□□□□ 0.19
USP39-209ENST00000458268 SLC2A10O95528 541 aa16.26■□□□□ 0.19
USP39-209ENST00000458268 RAB36O95755 333 aa16.26■□□□□ 0.19
USP39-209ENST00000458268 CBR1P16152 277 aa16.26■□□□□ 0.19
USP39-209ENST00000458268 ACADSP16219 412 aa16.26■□□□□ 0.19
USP39-209ENST00000458268 RHCEP18577 417 aa16.26■□□□□ 0.19
USP39-209ENST00000458268 CALB2P22676 271 aa16.26■□□□□ 0.19
USP39-209ENST00000458268 TTKP33981 857 aa16.26■□□□□ 0.19
USP39-209ENST00000458268 ACVR1BP36896 505 aa16.26■□□□□ 0.19
USP39-209ENST00000458268 ZNF84P51523 738 aa16.26■□□□□ 0.19
USP39-209ENST00000458268 NAAAQ02083 359 aa16.26■□□□□ 0.19
USP39-209ENST00000458268 FMODQ06828 376 aa16.26■□□□□ 0.19
USP39-209ENST00000458268 GSG1Q2KHT4 349 aa16.26■□□□□ 0.19
USP39-209ENST00000458268 HDDC2Q7Z4H3 204 aa16.26■□□□□ 0.19
USP39-209ENST00000458268 SLC7A13Q8TCU3 470 aa16.26■□□□□ 0.19
USP39-209ENST00000458268 NSMAFQ92636 917 aa16.26■□□□□ 0.19
USP39-209ENST00000458268 SH3GL3Q99963 347 aa16.26■□□□□ 0.19
USP39-209ENST00000458268 TMUB1Q9BVT8 246 aa16.26■□□□□ 0.19
USP39-209ENST00000458268 CACNG6Q9BXT2 260 aa16.26■□□□□ 0.19
USP39-209ENST00000458268 GSX2Q9BZM3 304 aa16.26■□□□□ 0.19
USP39-209ENST00000458268 RNF121Q9H920 327 aa16.26■□□□□ 0.19
USP39-209ENST00000458268 NOX3Q9HBY0 568 aa16.26■□□□□ 0.19
USP39-209ENST00000458268 GDF2Q9UK05 429 aaPredicted RBP16.26■□□□□ 0.19
USP39-209ENST00000458268 AURKCQ9UQB9 309 aa16.26■□□□□ 0.19
USP39-209ENST00000458268 HIF3AQ9Y2N7 669 aa16.26■□□□□ 0.19
USP39-209ENST00000458268 TRBV4-1A0A0J9YWV2 114 aa16.25■□□□□ 0.19
USP39-209ENST00000458268 TRIM64A6NGJ6 449 aa16.25■□□□□ 0.19
USP39-209ENST00000458268 TRIM64BA6NI03 449 aa16.25■□□□□ 0.19
USP39-209ENST00000458268 NDUFS7O75251 213 aa16.25■□□□□ 0.19
USP39-209ENST00000458268 IGF2P01344 180 aa16.25■□□□□ 0.19
USP39-209ENST00000458268 FABP3P05413 133 aa16.25■□□□□ 0.19
USP39-209ENST00000458268 HOXB1P14653 301 aaPredicted RBP16.25■□□□□ 0.19
USP39-209ENST00000458268 ITGA2P17301 1181 aa16.25■□□□□ 0.19
USP39-209ENST00000458268 ATP6V1B2P21281 511 aa16.25■□□□□ 0.19
USP39-209ENST00000458268 CALCRP30988 508 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms