RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 FAM183AA6NL82 134 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 SOX1O00570 391 aaPredicted RBP4.84□□□□□ -1.63
CSMD3-204ENST00000455883 P2RX1P51575 399 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 WNT7BP56706 349 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 CXADRP78310 365 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 CHAF1BQ13112 559 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 MRPL52Q86TS9 123 aaKnown RBP4.84□□□□□ -1.63
CSMD3-204ENST00000455883 GIMAP1Q8WWP7 306 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 CENPMQ9NSP4 180 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 CD207Q9UJ71 328 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 LNP1A1A4G5 178 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 SPINT2O43291 252 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 CSF2P04141 144 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 ACHEP22303 614 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 NDUFA6P56556 154 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 LTBQ06643 244 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 DMWDQ09019 674 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 AANATQ16613 207 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 MOGAT2Q3SYC2 334 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 FAM209AQ5JX71 171 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 OR4A47Q6IF82 309 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 APOOLQ6UXV4 268 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 FAM26EQ8N5C1 309 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 POGLUT1Q8NBL1 392 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 OR4A4PQ8NGN8 299 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 PEBP4Q96S96 227 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 WDR61Q9GZS3 305 aaKnown RBP4.84□□□□□ -1.63
CSMD3-204ENST00000455883 NCBP2LA6PVI3 153 aaKnown RBP4.84□□□□□ -1.63
CSMD3-204ENST00000455883 ARPC1BO15143 372 aaKnown RBP4.84□□□□□ -1.63
CSMD3-204ENST00000455883 NIPSNAP2O75323 286 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 TCRBP04435 133 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 ENPP1P22413 925 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 COMPP49747 757 aaPredicted RBP4.84□□□□□ -1.63
CSMD3-204ENST00000455883 CLDN20P56880 219 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 ERVFC1P60507 584 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 UBE2NP61088 152 aaKnown RBP4.84□□□□□ -1.63
CSMD3-204ENST00000455883 ISCA2Q86U28 154 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 GJC3Q8NFK1 279 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 OR51T1Q8NGJ9 327 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 OR10Z1Q8NGY1 313 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 PHOSPHO1Q8TCT1 267 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 CPNE4Q96A23 557 aaPredicted RBP4.84□□□□□ -1.63
CSMD3-204ENST00000455883 BPIFA2Q96DR5 249 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 NOL4LQ96MY1 436 aaPredicted RBP4.84□□□□□ -1.63
CSMD3-204ENST00000455883 SEC11CQ9BY50 192 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 CA10Q9NS85 328 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 EBF1Q9UH73 591 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 TRAPPC2LH3BP13 241 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 HABP2Q14520 560 aaPredicted RBP4.84□□□□□ -1.63
CSMD3-204ENST00000455883 RANBP10Q6VN20 620 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 MBOAT2Q6ZWT7 520 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 RAB40CQ96S21 281 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 HS3ST4Q9Y661 456 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 ANKRD63C9JTQ0 380 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 PDGFBP01127 241 aaPredicted RBP4.84□□□□□ -1.63
CSMD3-204ENST00000455883 PMP2P02689 132 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 PGA4P0DJD7 388 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 PGA5P0DJD9 388 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 EDNRBP24530 442 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 POU3F4P49335 361 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 ADPRMQ3LIE5 342 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 ISLR2Q6UXK2 745 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 OR9I1Q8NGQ6 314 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 ZNF707Q96C28 371 aaPredicted RBP4.84□□□□□ -1.63
CSMD3-204ENST00000455883 CLIP3Q96DZ5 547 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 B4GALT6Q9UBX8 382 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 HSD17B6O14756 317 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 PQBP1O60828 265 aaKnown RBP4.84□□□□□ -1.63
CSMD3-204ENST00000455883 IVDP26440 423 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 PREPP48147 710 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 ERVPABLB-1P60509 514 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 RD3Q7Z3Z2 195 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 SDR9C7Q8NEX9 313 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 CNIH3Q8TBE1 160 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 PXYLP1Q8TE99 480 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 SMPDL3BQ92485 455 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 GINS3Q9BRX5 216 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 VAMP8Q9BV40 100 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 CHRNA10Q9GZZ6 450 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 TREX1Q9NSU2 369 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 MMP24Q9Y5R2 645 aa4.84□□□□□ -1.63
CSMD3-204ENST00000455883 A0A1B0GV72 72 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 OR2A25A4D2G3 310 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 IFI6P09912 130 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 CD96P40200 585 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 AQP2P41181 271 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 GPR12P47775 334 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 HOXA1P49639 335 aaPredicted RBP4.84□□□□□ -1.64
CSMD3-204ENST00000455883 C15orf39Q6ZRI6 1047 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 CSNK1A1LQ8N752 337 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 EID2BQ96D98 161 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 METTL9Q9H1A3 318 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 ADAMTSL1Q8N6G6 1762 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 CEP192Q8TEP8 1941 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 LINC01549A6NIU2 74 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 MEIS3P2A8K0S8 358 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 GABRR3A8MPY1 467 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 HNRNPA3P51991 378 aaKnown RBP4.84□□□□□ -1.64
CSMD3-204ENST00000455883 PPP1CBP62140 327 aa4.84□□□□□ -1.64
CSMD3-204ENST00000455883 ACSM3Q53FZ2 586 aa4.84□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms