RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 TMCO1Q9UM00 188 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 TRAPPC4Q9Y296 219 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 SLC9A8Q9Y2E8 581 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 HDGFL3Q9Y3E1 203 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 DTNAQ9Y4J8 743 aa3.12□□□□□ -1.91
RBM39-220ENST00000455343 PCNX3Q9H6A9 2034 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 IGHV2OR16-5A0A0B4J2B6 119 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 A8MT66 165 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 M0QZ24 198 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 M0R233 179 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 GTPBP1O00178 669 aaKnown RBP3.11□□□□□ -1.91
RBM39-220ENST00000455343 NR5A2O00482 541 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 EIF1BO60739 113 aaKnown RBP3.11□□□□□ -1.91
RBM39-220ENST00000455343 LGI1O95970 557 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 IGHV2-5P01817 119 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 HMGN2P05204 90 aaKnown RBP3.11□□□□□ -1.91
RBM39-220ENST00000455343 ALOX5P09917 674 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 ZNF35P13682 527 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 CBR1P16152 277 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 TCN1P20061 433 aaPredicted RBP3.11□□□□□ -1.91
RBM39-220ENST00000455343 GLRXP35754 106 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 ANP32AP39687 249 aaKnown RBP3.11□□□□□ -1.91
RBM39-220ENST00000455343 APOBEC1P41238 236 aaKnown RBP3.11□□□□□ -1.91
RBM39-220ENST00000455343 P2RY4P51582 365 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 PRKAG1P54619 331 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 UCP3P55916 312 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 KRTAP10-3P60369 221 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 DR1Q01658 176 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 MERTKQ12866 999 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 HSPB3Q12988 150 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 NAB1Q13506 487 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 PDE7AQ13946 482 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 RASA2Q15283 850 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 UNC50Q53HI1 259 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 ZNF678Q5SXM1 525 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 DCAF12L2Q5VW00 463 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 NOXRED1Q6NXP6 359 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 CDC73Q6P1J9 531 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 C16orf87Q6PH81 154 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 PAQR6Q6TCH4 344 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 KLHL24Q6TFL4 600 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 RBMS3Q6XE24 437 aaKnown RBP3.11□□□□□ -1.91
RBM39-220ENST00000455343 ZNF813Q6ZN06 617 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 C9orf139Q6ZV77 190 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 LINGO2Q7L985 606 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 IZUMO1Q8IYV9 350 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 NANOGP1Q8N7R0 232 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 COX18Q8N8Q8 333 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 NRACQ8N912 160 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 FAM71CQ8NEG0 241 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 PSMA8Q8TAA3 256 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 METTL6Q8TCB7 284 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 TMEM234Q8WY98 164 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 CDS1Q92903 461 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 POP5Q969H6 163 aaKnown RBP3.11□□□□□ -1.91
RBM39-220ENST00000455343 SLC25A28Q96A46 364 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 ZHX1-C8orf76Q96EF9 292 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 FAM120BQ96EK7 910 aaKnown RBP3.11□□□□□ -1.91
RBM39-220ENST00000455343 OTUB1Q96FW1 271 aaPredicted RBP3.11□□□□□ -1.91
RBM39-220ENST00000455343 METTL2AQ96IZ6 378 aaKnown RBP3.11□□□□□ -1.91
RBM39-220ENST00000455343 ZNF75AQ96N20 296 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 PRR25Q96S07 402 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 ZNF382Q96SR6 550 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 GPA33Q99795 319 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 RBM4BQ9BQ04 359 aaKnown RBP3.11□□□□□ -1.91
RBM39-220ENST00000455343 THUMPD3Q9BV44 507 aaKnown RBP3.11□□□□□ -1.91
RBM39-220ENST00000455343 DPCDQ9BVM2 203 aaPredicted RBP3.11□□□□□ -1.91
RBM39-220ENST00000455343 SF3B5Q9BWJ5 86 aaKnown RBP3.11□□□□□ -1.91
RBM39-220ENST00000455343 ZNF416Q9BWM5 594 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 KRTAP2-2Q9BYT5 123 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 MRPL37Q9BZE1 423 aaKnown RBP3.11□□□□□ -1.91
RBM39-220ENST00000455343 NMUR2Q9GZQ4 415 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 IQCGQ9H095 443 aaKnown RBP3.11□□□□□ -1.91
RBM39-220ENST00000455343 ZNF385DQ9H6B1 395 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 NOX3Q9HBY0 568 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 DYNLRB1Q9NP97 96 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 MIEF1Q9NQG6 463 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.11□□□□□ -1.91
RBM39-220ENST00000455343 CTPS2Q9NRF8 586 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 SIRT3Q9NTG7 399 aaPredicted RBP3.11□□□□□ -1.91
RBM39-220ENST00000455343 PLEK2Q9NYT0 353 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 ZNF69Q9UC07 566 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 CHRNA9Q9UGM1 479 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 NUP50Q9UKX7 468 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 SNX12Q9UMY4 172 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 SNX24Q9Y343 169 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 CMAHPQ9Y471 501 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 CCL27Q9Y4X3 112 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 KCNE3Q9Y6H6 103 aa3.11□□□□□ -1.91
RBM39-220ENST00000455343 DYNC2H1Q8NCM8 4307 aaKnown RBP3.11□□□□□ -1.91
RBM39-220ENST00000455343 DNAH1Q9P2D7 4330 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 IGLV3-9A0A075B6K5 115 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 A0A087WWL8 130 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 CLPSL1A2RUU4 121 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 OR6C65A6NJZ3 312 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 TRIM49D1C9J1S8 452 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 RPL36A-HNRNPH2H7BZ11 118 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 TIMM23O14925 209 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 PIP5K1BO14986 540 aa3.1□□□□□ -1.91
RBM39-220ENST00000455343 ANKRD28O15084 1053 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms