RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 NANOS1Q8WY41 292 aaKnown RBP8.4□□□□□ -1.06
USP54-207ENST00000451492 FAM162AQ96A26 154 aa8.4□□□□□ -1.06
USP54-207ENST00000451492 HSH2DQ96JZ2 352 aa8.4□□□□□ -1.06
USP54-207ENST00000451492 PRRC1Q96M27 445 aa8.4□□□□□ -1.06
USP54-207ENST00000451492 ZNF347Q96SE7 839 aa8.4□□□□□ -1.06
USP54-207ENST00000451492 SH3GL3Q99963 347 aa8.4□□□□□ -1.06
USP54-207ENST00000451492 ZNF426Q9BUY5 554 aa8.4□□□□□ -1.06
USP54-207ENST00000451492 OR51B6Q9H340 312 aa8.4□□□□□ -1.06
USP54-207ENST00000451492 GLTPQ9NZD2 209 aa8.4□□□□□ -1.06
USP54-207ENST00000451492 CRNNQ9UBG3 495 aaPredicted RBP8.4□□□□□ -1.06
USP54-207ENST00000451492 SNX13Q9Y5W8 968 aa8.4□□□□□ -1.06
USP54-207ENST00000451492 V9GYQ6 96 aa8.4□□□□□ -1.06
USP54-207ENST00000451492 MTORP42345 2549 aa8.4□□□□□ -1.07
USP54-207ENST00000451492 NSD1Q96L73 2696 aaPredicted RBP8.39□□□□□ -1.07
USP54-207ENST00000451492 CUBNO60494 3623 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 H7C417 338 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 hCG_2039718K7EN88 272 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 GPRIN2O60269 458 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 SLC2A10O95528 541 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 BCL10O95999 233 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 IGLV1-44P01699 117 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 IFNW1P05000 195 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 QDPRP09417 244 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 PGA4P0DJD7 388 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 PGA3P0DJD8 388 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 SAGP10523 405 aaPredicted RBP8.39□□□□□ -1.07
USP54-207ENST00000451492 BMP4P12644 408 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 IFI30P13284 250 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 THBS4P35443 961 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 ARR3P36575 388 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 SERPINF1P36955 418 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 GIPRP48546 466 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 GSK3BP49841 420 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 SELENOWP63302 87 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 LSM11P83369 360 aaKnown RBP eCLIP8.39□□□□□ -1.07
USP54-207ENST00000451492 HGFACQ04756 655 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 RUNX1T1Q06455 604 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 KRTAP1-1Q07627 177 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 ZP4Q12836 540 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 DAG1Q14118 895 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 RAB39AQ14964 217 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 ADIPOQQ15848 244 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 FKBP9P1Q75LS8 142 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 CPLX4Q7Z7G2 160 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 RNF148Q8N7C7 305 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 NOXO1Q8NFA2 376 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 OR6X1Q8NH79 312 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 FGFBP3Q8TAT2 258 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 LZICQ8WZA0 190 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 FAM168AQ92567 244 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 TMEM54Q969K7 222 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 SLC25A44Q96H78 314 aaPredicted RBP8.39□□□□□ -1.07
USP54-207ENST00000451492 BOD1Q96IK1 185 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 LRR1Q96L50 414 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 KCTD14Q9BQ13 255 aaPredicted RBP8.39□□□□□ -1.07
USP54-207ENST00000451492 FNDC11Q9BVV2 318 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 SLC19A3Q9BZV2 496 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 GRIP2Q9C0E4 1043 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 NSRP1Q9H0G5 558 aaKnown RBP8.39□□□□□ -1.07
USP54-207ENST00000451492 TPK1Q9H3S4 243 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 RNF121Q9H920 327 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 EFCAB1Q9HAE3 211 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 DYNLRB1Q9NP97 96 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 INIPQ9NRY2 104 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 ZNF224Q9NZL3 707 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 EGFL7Q9UHF1 273 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 FZR1Q9UM11 496 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 A4GNTQ9UNA3 340 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 MED31Q9Y3C7 131 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 FKBP7Q9Y680 259 aa8.39□□□□□ -1.07
USP54-207ENST00000451492 ALPK2Q86TB3 2170 aa8.38□□□□□ -1.07
USP54-207ENST00000451492 ANK3Q12955 4377 aaKnown RBP8.38□□□□□ -1.07
USP54-207ENST00000451492 TRAV27A0A087WT01 109 aa8.38□□□□□ -1.07
USP54-207ENST00000451492 DHHO43323 396 aa8.38□□□□□ -1.07
USP54-207ENST00000451492 UBL3O95164 117 aa8.38□□□□□ -1.07
USP54-207ENST00000451492 IGHG1P01857 330 aa8.38□□□□□ -1.07
USP54-207ENST00000451492 CCL2P13500 99 aa8.38□□□□□ -1.07
USP54-207ENST00000451492 HOXB1P14653 301 aaPredicted RBP8.38□□□□□ -1.07
USP54-207ENST00000451492 TCN1P20061 433 aaPredicted RBP8.38□□□□□ -1.07
USP54-207ENST00000451492 NPR2P20594 1047 aa8.38□□□□□ -1.07
USP54-207ENST00000451492 IFNA8P32881 189 aa8.38□□□□□ -1.07
USP54-207ENST00000451492 RBM34P42696 430 aaKnown RBP8.38□□□□□ -1.07
USP54-207ENST00000451492 GPR4P46093 362 aa8.38□□□□□ -1.07
USP54-207ENST00000451492 EFNA4P52798 201 aa8.38□□□□□ -1.07
USP54-207ENST00000451492 PSME3P61289 254 aa8.38□□□□□ -1.07
USP54-207ENST00000451492 RAB1AP62820 205 aa8.38□□□□□ -1.07
USP54-207ENST00000451492 GNGT1P63211 74 aa8.38□□□□□ -1.07
USP54-207ENST00000451492 GALK2Q01415 458 aa8.38□□□□□ -1.07
USP54-207ENST00000451492 FMODQ06828 376 aa8.38□□□□□ -1.07
USP54-207ENST00000451492 CD47Q08722 323 aa8.38□□□□□ -1.07
USP54-207ENST00000451492 ST3GAL3Q11203 375 aa8.38□□□□□ -1.07
USP54-207ENST00000451492 GGTLC2Q14390 218 aa8.38□□□□□ -1.07
USP54-207ENST00000451492 LAPTM4AQ15012 233 aa8.38□□□□□ -1.07
USP54-207ENST00000451492 SWI5Q1ZZU3 235 aa8.38□□□□□ -1.07
USP54-207ENST00000451492 MST1LQ2TV78 715 aa8.38□□□□□ -1.07
USP54-207ENST00000451492 ALKBH6Q3KRA9 238 aa8.38□□□□□ -1.07
USP54-207ENST00000451492 IFI44LQ53G44 452 aa8.38□□□□□ -1.07
USP54-207ENST00000451492 GKAP1Q5VSY0 366 aaPredicted RBP8.38□□□□□ -1.07
USP54-207ENST00000451492 NHLRC1Q6VVB1 395 aa8.38□□□□□ -1.07
USP54-207ENST00000451492 SKA3Q8IX90 412 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms