RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 PIP4P1Q86T03 277 aa9.51□□□□□ -0.89
VIPAS39-203ENST00000448935 LSRQ86X29 649 aaPredicted RBP9.51□□□□□ -0.89
VIPAS39-203ENST00000448935 MARCH9Q86YJ5 346 aa9.51□□□□□ -0.89
VIPAS39-203ENST00000448935 GHDCQ8N2G8 530 aa9.51□□□□□ -0.89
VIPAS39-203ENST00000448935 MFSD4AQ8N468 514 aa9.51□□□□□ -0.89
VIPAS39-203ENST00000448935 WDSUB1Q8N9V3 476 aa9.51□□□□□ -0.89
VIPAS39-203ENST00000448935 OR1J4Q8NGS1 313 aa9.51□□□□□ -0.89
VIPAS39-203ENST00000448935 NEIL3Q8TAT5 605 aa9.51□□□□□ -0.89
VIPAS39-203ENST00000448935 KLHL15Q96M94 604 aa9.51□□□□□ -0.89
VIPAS39-203ENST00000448935 GSX2Q9BZM3 304 aa9.51□□□□□ -0.89
VIPAS39-203ENST00000448935 RERGLQ9H628 205 aa9.51□□□□□ -0.89
VIPAS39-203ENST00000448935 MARCH7Q9H992 704 aa9.51□□□□□ -0.89
VIPAS39-203ENST00000448935 SMURF1Q9HCE7 757 aa9.51□□□□□ -0.89
VIPAS39-203ENST00000448935 SH2D2AQ9NP31 389 aa9.51□□□□□ -0.89
VIPAS39-203ENST00000448935 P4HTMQ9NXG6 502 aa9.51□□□□□ -0.89
VIPAS39-203ENST00000448935 TEKT2Q9UIF3 430 aa9.51□□□□□ -0.89
VIPAS39-203ENST00000448935 NPIPA1Q9UND3 350 aa9.51□□□□□ -0.89
VIPAS39-203ENST00000448935 TTLL8A6PVC2 850 aa9.5□□□□□ -0.89
VIPAS39-203ENST00000448935 B4DXG7 233 aa9.5□□□□□ -0.89
VIPAS39-203ENST00000448935 H3BML4 177 aa9.5□□□□□ -0.89
VIPAS39-203ENST00000448935 STMND1H3BQB6 276 aa9.5□□□□□ -0.89
VIPAS39-203ENST00000448935 J3QRK9 145 aa9.5□□□□□ -0.89
VIPAS39-203ENST00000448935 SELENOFO60613 162 aa9.5□□□□□ -0.89
VIPAS39-203ENST00000448935 RAD1O60671 282 aa9.5□□□□□ -0.89
VIPAS39-203ENST00000448935 CBR3O75828 277 aa9.5□□□□□ -0.89
VIPAS39-203ENST00000448935 MYL9P24844 172 aa9.5□□□□□ -0.89
VIPAS39-203ENST00000448935 CD82P27701 267 aa9.5□□□□□ -0.89
VIPAS39-203ENST00000448935 CALRP27797 417 aaKnown RBP9.5□□□□□ -0.89
VIPAS39-203ENST00000448935 SDC2P34741 201 aa9.5□□□□□ -0.89
VIPAS39-203ENST00000448935 ETV6P41212 452 aa9.5□□□□□ -0.89
VIPAS39-203ENST00000448935 TGM4P49221 684 aa9.5□□□□□ -0.89
VIPAS39-203ENST00000448935 MTNR1BP49286 362 aa9.5□□□□□ -0.89
VIPAS39-203ENST00000448935 SIRPAP78324 504 aa9.5□□□□□ -0.89
VIPAS39-203ENST00000448935 GLYR1Q49A26 553 aaPredicted RBP9.5□□□□□ -0.89
VIPAS39-203ENST00000448935 ARL9Q6T311 187 aa9.5□□□□□ -0.89
VIPAS39-203ENST00000448935 TIGD4Q8IY51 512 aa9.5□□□□□ -0.89
VIPAS39-203ENST00000448935 OR6V1Q8N148 313 aa9.5□□□□□ -0.89
VIPAS39-203ENST00000448935 GTPBP8Q8N3Z3 284 aaPredicted RBP9.5□□□□□ -0.89
VIPAS39-203ENST00000448935 POC1BQ8TC44 478 aa9.5□□□□□ -0.89
VIPAS39-203ENST00000448935 NTNG2Q96CW9 530 aa9.5□□□□□ -0.89
VIPAS39-203ENST00000448935 SMIM19Q96E16 107 aa9.5□□□□□ -0.89
VIPAS39-203ENST00000448935 ARL5BQ96KC2 179 aa9.5□□□□□ -0.89
VIPAS39-203ENST00000448935 ADAD1Q96M93 576 aaKnown RBP9.5□□□□□ -0.89
VIPAS39-203ENST00000448935 INTS14Q96SY0 518 aa9.5□□□□□ -0.89
VIPAS39-203ENST00000448935 HDHD5Q9BXW7 423 aa9.5□□□□□ -0.89
VIPAS39-203ENST00000448935 SYT4Q9H2B2 425 aa9.5□□□□□ -0.89
VIPAS39-203ENST00000448935 WDR76Q9H967 626 aa9.5□□□□□ -0.89
VIPAS39-203ENST00000448935 FOXJ2Q9P0K8 574 aa9.5□□□□□ -0.89
VIPAS39-203ENST00000448935 ABI3Q9P2A4 366 aa9.5□□□□□ -0.89
VIPAS39-203ENST00000448935 GNG8Q9UK08 70 aa9.5□□□□□ -0.89
VIPAS39-203ENST00000448935 FBXL2Q9UKC9 423 aa9.5□□□□□ -0.89
VIPAS39-203ENST00000448935 TRAPPC4Q9Y296 219 aa9.5□□□□□ -0.89
VIPAS39-203ENST00000448935 RPH3AQ9Y2J0 694 aaPredicted RBP9.5□□□□□ -0.89
VIPAS39-203ENST00000448935 LOC110117498-PIK3R3F6TDL0 507 aa9.49□□□□□ -0.89
VIPAS39-203ENST00000448935 MS4A18H0YCH9 400 aa9.49□□□□□ -0.89
VIPAS39-203ENST00000448935 GATBO75879 557 aaKnown RBP9.49□□□□□ -0.89
VIPAS39-203ENST00000448935 SULT1C4O75897 302 aa9.49□□□□□ -0.89
VIPAS39-203ENST00000448935 TNFSF15O95150 251 aa9.49□□□□□ -0.89
VIPAS39-203ENST00000448935 WISP1O95388 367 aa9.49□□□□□ -0.89
VIPAS39-203ENST00000448935 PLGP00747 810 aaPredicted RBP9.49□□□□□ -0.89
VIPAS39-203ENST00000448935 CCL3P10147 92 aa9.49□□□□□ -0.89
VIPAS39-203ENST00000448935 IMPDH2P12268 514 aa9.49□□□□□ -0.89
VIPAS39-203ENST00000448935 LIFP15018 202 aa9.49□□□□□ -0.89
VIPAS39-203ENST00000448935 ZNF17P17021 662 aa9.49□□□□□ -0.89
VIPAS39-203ENST00000448935 DPP4P27487 766 aa9.49□□□□□ -0.89
VIPAS39-203ENST00000448935 SLC35A1P78382 337 aa9.49□□□□□ -0.89
VIPAS39-203ENST00000448935 MXD1Q05195 221 aa9.49□□□□□ -0.89
VIPAS39-203ENST00000448935 EGR3Q06889 387 aa9.49□□□□□ -0.89
VIPAS39-203ENST00000448935 HNRNPA0Q13151 305 aaKnown RBP9.49□□□□□ -0.89
VIPAS39-203ENST00000448935 MYBPHQ13203 477 aa9.49□□□□□ -0.89
VIPAS39-203ENST00000448935 CDK5R1Q15078 307 aa9.49□□□□□ -0.89
VIPAS39-203ENST00000448935 RGS21Q2M5E4 152 aa9.49□□□□□ -0.89
VIPAS39-203ENST00000448935 MS4A18Q3C1V0 323 aa9.49□□□□□ -0.89
VIPAS39-203ENST00000448935 TP53I3Q53FA7 332 aa9.49□□□□□ -0.89
VIPAS39-203ENST00000448935 ACER2Q5QJU3 275 aa9.49□□□□□ -0.89
VIPAS39-203ENST00000448935 TIGD3Q6B0B8 471 aa9.49□□□□□ -0.89
VIPAS39-203ENST00000448935 VASNQ6EMK4 673 aa9.49□□□□□ -0.89
VIPAS39-203ENST00000448935 SLC35D2Q76EJ3 337 aa9.49□□□□□ -0.89
VIPAS39-203ENST00000448935 SSX6Q7RTT6 188 aa9.49□□□□□ -0.89
VIPAS39-203ENST00000448935 TPRA1Q86W33 373 aa9.49□□□□□ -0.89
VIPAS39-203ENST00000448935 CDC20BQ86Y33 519 aa9.49□□□□□ -0.89
VIPAS39-203ENST00000448935 PM20D2Q8IYS1 436 aa9.49□□□□□ -0.89
VIPAS39-203ENST00000448935 FNDC8Q8TC99 324 aa9.49□□□□□ -0.89
VIPAS39-203ENST00000448935 ZNRF4Q8WWF5 429 aa9.49□□□□□ -0.89
VIPAS39-203ENST00000448935 ASB17Q8WXJ9 295 aa9.49□□□□□ -0.89
VIPAS39-203ENST00000448935 PHYHIPQ92561 330 aa9.49□□□□□ -0.89
VIPAS39-203ENST00000448935 NKD1Q969G9 470 aa9.49□□□□□ -0.89
VIPAS39-203ENST00000448935 DNAJA3Q96EY1 480 aa9.49□□□□□ -0.89
VIPAS39-203ENST00000448935 PELI1Q96FA3 418 aa9.49□□□□□ -0.89
VIPAS39-203ENST00000448935 CNTNAP3BQ96NU0 1288 aa9.49□□□□□ -0.89
VIPAS39-203ENST00000448935 WDFY2Q96P53 400 aa9.49□□□□□ -0.89
VIPAS39-203ENST00000448935 KCNS3Q9BQ31 491 aa9.49□□□□□ -0.89
VIPAS39-203ENST00000448935 CNTNAP3Q9BZ76 1288 aa9.49□□□□□ -0.89
VIPAS39-203ENST00000448935 TPK1Q9H3S4 243 aa9.49□□□□□ -0.89
VIPAS39-203ENST00000448935 ST6GALNAC2Q9UJ37 374 aa9.49□□□□□ -0.89
VIPAS39-203ENST00000448935 LAMP5Q9UJQ1 280 aa9.49□□□□□ -0.89
VIPAS39-203ENST00000448935 DKKL1Q9UK85 242 aa9.49□□□□□ -0.89
VIPAS39-203ENST00000448935 B9D1Q9UPM9 204 aa9.49□□□□□ -0.89
VIPAS39-203ENST00000448935 SDK2Q58EX2 2172 aa9.49□□□□□ -0.89
VIPAS39-203ENST00000448935 MUC6Q6W4X9 2439 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms