RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 DHCR7Q9UBM7 475 aaKnown RBP11.93□□□□□ -0.5
DDX56-206ENST00000446987 FLVCR2Q9UPI3 526 aa11.93□□□□□ -0.5
DDX56-206ENST00000446987 TP53TG5Q9Y2B4 290 aa11.93□□□□□ -0.5
DDX56-206ENST00000446987 MSRB2Q9Y3D2 182 aa11.93□□□□□ -0.5
DDX56-206ENST00000446987 CHD8Q9HCK8 2581 aa11.93□□□□□ -0.5
DDX56-206ENST00000446987 TRAV1-2A0A0B4J238 106 aa11.93□□□□□ -0.5
DDX56-206ENST00000446987 AP4M1O00189 453 aa11.93□□□□□ -0.5
DDX56-206ENST00000446987 C1orf105O95561 183 aa11.93□□□□□ -0.5
DDX56-206ENST00000446987 ITGA3P26006 1051 aa11.93□□□□□ -0.5
DDX56-206ENST00000446987 NDUFS1P28331 727 aa11.93□□□□□ -0.5
DDX56-206ENST00000446987 PEBP1P30086 187 aaKnown RBP11.93□□□□□ -0.5
DDX56-206ENST00000446987 NRG3P56975 720 aa11.93□□□□□ -0.5
DDX56-206ENST00000446987 SRSF4Q08170 494 aaKnown RBP11.93□□□□□ -0.5
DDX56-206ENST00000446987 GAB1Q13480 694 aa11.93□□□□□ -0.5
DDX56-206ENST00000446987 ZNF239Q16600 458 aaKnown RBP11.93□□□□□ -0.5
DDX56-206ENST00000446987 CXXC5Q7LFL8 322 aaKnown RBP11.93□□□□□ -0.5
DDX56-206ENST00000446987 PXKQ7Z7A4 578 aa11.93□□□□□ -0.5
DDX56-206ENST00000446987 ZFP41Q8N8Y5 198 aa11.93□□□□□ -0.5
DDX56-206ENST00000446987 LINC01555Q8NAE3 123 aa11.93□□□□□ -0.5
DDX56-206ENST00000446987 RCBTB1Q8NDN9 531 aa11.93□□□□□ -0.5
DDX56-206ENST00000446987 DNAAF1Q8NEP3 725 aa11.93□□□□□ -0.5
DDX56-206ENST00000446987 OR2AK2Q8NG84 335 aa11.93□□□□□ -0.5
DDX56-206ENST00000446987 AKR7LQ8NHP1 331 aa11.93□□□□□ -0.5
DDX56-206ENST00000446987 NFKBIDQ8NI38 313 aa11.93□□□□□ -0.5
DDX56-206ENST00000446987 MESP1Q9BRJ9 268 aa11.93□□□□□ -0.5
DDX56-206ENST00000446987 GINS4Q9BRT9 223 aa11.93□□□□□ -0.5
DDX56-206ENST00000446987 BHLHE41Q9C0J9 482 aaPredicted RBP11.93□□□□□ -0.5
DDX56-206ENST00000446987 TOLLIPQ9H0E2 274 aa11.93□□□□□ -0.5
DDX56-206ENST00000446987 MIEF1Q9NQG6 463 aa11.93□□□□□ -0.5
DDX56-206ENST00000446987 MED17Q9NVC6 651 aa11.93□□□□□ -0.5
DDX56-206ENST00000446987 DMXL2Q8TDJ6 3036 aa11.93□□□□□ -0.5
DDX56-206ENST00000446987 TMEM200CA6NKL6 621 aa11.92□□□□□ -0.5
DDX56-206ENST00000446987 IFNA2P01563 188 aa11.92□□□□□ -0.5
DDX56-206ENST00000446987 ATP1B1P05026 303 aa11.92□□□□□ -0.5
DDX56-206ENST00000446987 OR12D1P0DN82 309 aa11.92□□□□□ -0.5
DDX56-206ENST00000446987 LAMP1P11279 417 aa11.92□□□□□ -0.5
DDX56-206ENST00000446987 HSD3B2P26439 372 aa11.92□□□□□ -0.5
DDX56-206ENST00000446987 CRATP43155 626 aa11.92□□□□□ -0.5
DDX56-206ENST00000446987 RBMS2Q15434 407 aaKnown RBP11.92□□□□□ -0.5
DDX56-206ENST00000446987 C9orf152Q5JTZ5 239 aa11.92□□□□□ -0.5
DDX56-206ENST00000446987 TMEM71Q6P5X7 295 aa11.92□□□□□ -0.5
DDX56-206ENST00000446987 IL20RBQ6UXL0 311 aa11.92□□□□□ -0.5
DDX56-206ENST00000446987 SLC36A1Q7Z2H8 476 aa11.92□□□□□ -0.5
DDX56-206ENST00000446987 DMRTC2Q8IXT2 367 aaPredicted RBP11.92□□□□□ -0.5
DDX56-206ENST00000446987 ARRDC1Q8N5I2 433 aa11.92□□□□□ -0.5
DDX56-206ENST00000446987 SPRYD4Q8WW59 207 aaPredicted RBP11.92□□□□□ -0.5
DDX56-206ENST00000446987 LIN37Q96GY3 246 aaPredicted RBP11.92□□□□□ -0.5
DDX56-206ENST00000446987 IL17FQ96PD4 163 aa11.92□□□□□ -0.5
DDX56-206ENST00000446987 RAB33BQ9H082 229 aa11.92□□□□□ -0.5
DDX56-206ENST00000446987 TLNRD1Q9H1K6 362 aa11.92□□□□□ -0.5
DDX56-206ENST00000446987 TMEM100Q9NV29 134 aa11.92□□□□□ -0.5
DDX56-206ENST00000446987 SEMA5BQ9P283 1151 aa11.92□□□□□ -0.5
DDX56-206ENST00000446987 KLHL9Q9P2J3 617 aa11.92□□□□□ -0.5
DDX56-206ENST00000446987 FBXW2Q9UKT8 454 aa11.92□□□□□ -0.5
DDX56-206ENST00000446987 COLEC10Q9Y6Z7 277 aa11.92□□□□□ -0.5
DDX56-206ENST00000446987 A0A1W2PRQ8 180 aa11.91□□□□□ -0.5
DDX56-206ENST00000446987 ANKRD20A5PA0PJZ0 165 aa11.91□□□□□ -0.5
DDX56-206ENST00000446987 OR6C74A6NCV1 312 aa11.91□□□□□ -0.5
DDX56-206ENST00000446987 TXNL1O43396 289 aa11.91□□□□□ -0.5
DDX56-206ENST00000446987 GATBO75879 557 aaKnown RBP11.91□□□□□ -0.5
DDX56-206ENST00000446987 CD8AP01732 235 aa11.91□□□□□ -0.5
DDX56-206ENST00000446987 OR8U8P0C7N1 319 aa11.91□□□□□ -0.5
DDX56-206ENST00000446987 MPC1LP0DKB6 136 aa11.91□□□□□ -0.5
DDX56-206ENST00000446987 ERGP11308 486 aa11.91□□□□□ -0.5
DDX56-206ENST00000446987 CD79AP11912 226 aa11.91□□□□□ -0.5
DDX56-206ENST00000446987 SLC25A4P12235 298 aa11.91□□□□□ -0.5
DDX56-206ENST00000446987 BDKRB2P30411 391 aa11.91□□□□□ -0.5
DDX56-206ENST00000446987 LSSP48449 732 aa11.91□□□□□ -0.5
DDX56-206ENST00000446987 LIM2P55344 173 aa11.91□□□□□ -0.5
DDX56-206ENST00000446987 H2BFSP57053 126 aa11.91□□□□□ -0.5
DDX56-206ENST00000446987 CPSF6Q16630 551 aaKnown RBP eCLIP11.91□□□□□ -0.5
DDX56-206ENST00000446987 SLC5A12Q1EHB4 618 aa11.91□□□□□ -0.5
DDX56-206ENST00000446987 UBE2NLQ5JXB2 153 aa11.91□□□□□ -0.5
DDX56-206ENST00000446987 SFRP4Q6FHJ7 346 aaPredicted RBP11.91□□□□□ -0.5
DDX56-206ENST00000446987 JMJD6Q6NYC1 403 aaPredicted RBP11.91□□□□□ -0.5
DDX56-206ENST00000446987 ZNF613Q6PF04 617 aa11.91□□□□□ -0.5
DDX56-206ENST00000446987 NHLRC1Q6VVB1 395 aa11.91□□□□□ -0.5
DDX56-206ENST00000446987 ZSCAN1Q8NBB4 408 aa11.91□□□□□ -0.5
DDX56-206ENST00000446987 OR4E2Q8NGC2 313 aa11.91□□□□□ -0.5
DDX56-206ENST00000446987 OR1S2Q8NGQ3 325 aa11.91□□□□□ -0.5
DDX56-206ENST00000446987 OR5J2Q8NH18 312 aa11.91□□□□□ -0.5
DDX56-206ENST00000446987 ASB11Q8WXH4 323 aa11.91□□□□□ -0.5
DDX56-206ENST00000446987 ACOT11Q8WXI4 607 aaPredicted RBP11.91□□□□□ -0.5
DDX56-206ENST00000446987 ZFP3Q96NJ6 502 aa11.91□□□□□ -0.5
DDX56-206ENST00000446987 TEAD3Q99594 435 aa11.91□□□□□ -0.5
DDX56-206ENST00000446987 ADAM19Q9H013 955 aa11.91□□□□□ -0.5
DDX56-206ENST00000446987 MMP26Q9NRE1 261 aa11.91□□□□□ -0.5
DDX56-206ENST00000446987 GFOD1Q9NXC2 390 aa11.91□□□□□ -0.5
DDX56-206ENST00000446987 RCE1Q9Y256 329 aa11.91□□□□□ -0.5
DDX56-206ENST00000446987 IGF2RP11717 2491 aa11.91□□□□□ -0.5
DDX56-206ENST00000446987 RNF222A6NCQ9 220 aa11.91□□□□□ -0.5
DDX56-206ENST00000446987 LRIT2A6NDA9 550 aa11.91□□□□□ -0.5
DDX56-206ENST00000446987 UGDHO60701 494 aa11.91□□□□□ -0.5
DDX56-206ENST00000446987 SH3BGRLO75368 114 aa11.91□□□□□ -0.5
DDX56-206ENST00000446987 KLHL18O94889 574 aa11.91□□□□□ -0.5
DDX56-206ENST00000446987 IGFBP1P08833 259 aaPredicted RBP11.91□□□□□ -0.5
DDX56-206ENST00000446987 ZNF35P13682 527 aa11.91□□□□□ -0.5
DDX56-206ENST00000446987 ETFAP13804 333 aa11.91□□□□□ -0.5
DDX56-206ENST00000446987 EPORP19235 508 aa11.91□□□□□ -0.5
DDX56-206ENST00000446987 TAS2R43P59537 309 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms