RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 SNX29P2Q8IUI4 249 aa12.81□□□□□ -0.36
SMARCA4-204ENST00000444061 TMEM99Q8N816 258 aa12.81□□□□□ -0.36
SMARCA4-204ENST00000444061 INTS12Q96CB8 462 aaKnown RBP12.81□□□□□ -0.36
SMARCA4-204ENST00000444061 MICU1Q9BPX6 476 aa12.81□□□□□ -0.36
SMARCA4-204ENST00000444061 WDR76Q9H967 626 aa12.81□□□□□ -0.36
SMARCA4-204ENST00000444061 NOP16Q9Y3C1 178 aaKnown RBP12.81□□□□□ -0.36
SMARCA4-204ENST00000444061 A0A1W2PS29 197 aa12.81□□□□□ -0.36
SMARCA4-204ENST00000444061 PCP4L1A6NKN8 68 aa12.81□□□□□ -0.36
SMARCA4-204ENST00000444061 TIMM8AO60220 97 aaPredicted RBP12.81□□□□□ -0.36
SMARCA4-204ENST00000444061 OR8G3PP0DMU2 310 aa12.81□□□□□ -0.36
SMARCA4-204ENST00000444061 VBP1P61758 197 aa12.81□□□□□ -0.36
SMARCA4-204ENST00000444061 OCLNQ16625 522 aa12.81□□□□□ -0.36
SMARCA4-204ENST00000444061 PAPD5Q8NDF8 572 aaKnown RBP12.81□□□□□ -0.36
SMARCA4-204ENST00000444061 TMEM52Q8NDY8 209 aa12.81□□□□□ -0.36
SMARCA4-204ENST00000444061 DHRS1Q96LJ7 313 aa12.81□□□□□ -0.36
SMARCA4-204ENST00000444061 ZNF385DQ9H6B1 395 aa12.81□□□□□ -0.36
SMARCA4-204ENST00000444061 ZNF442Q9H7R0 627 aa12.81□□□□□ -0.36
SMARCA4-204ENST00000444061 COA3Q9Y2R0 106 aaPredicted RBP12.81□□□□□ -0.36
SMARCA4-204ENST00000444061 HRH3Q9Y5N1 445 aa12.81□□□□□ -0.36
SMARCA4-204ENST00000444061 MRPS18BQ9Y676 258 aaKnown RBP12.81□□□□□ -0.36
SMARCA4-204ENST00000444061 CACNA1GO43497 2377 aa12.81□□□□□ -0.36
SMARCA4-204ENST00000444061 CACNA1CQ13936 2221 aa12.81□□□□□ -0.36
SMARCA4-204ENST00000444061 FAM25EA8MYX2 175 aa12.8□□□□□ -0.36
SMARCA4-204ENST00000444061 ADH7P40394 386 aa12.8□□□□□ -0.36
SMARCA4-204ENST00000444061 ZNF691Q5VV52 312 aa12.8□□□□□ -0.36
SMARCA4-204ENST00000444061 FBXO34Q9NWN3 711 aa12.8□□□□□ -0.36
SMARCA4-204ENST00000444061 EDARQ9UNE0 448 aa12.8□□□□□ -0.36
SMARCA4-204ENST00000444061 STUB1Q9UNE7 303 aa12.8□□□□□ -0.36
SMARCA4-204ENST00000444061 CCL27Q9Y4X3 112 aa12.8□□□□□ -0.36
SMARCA4-204ENST00000444061 CD3GP09693 182 aa12.8□□□□□ -0.36
SMARCA4-204ENST00000444061 OR2T7P0C7T2 308 aa12.8□□□□□ -0.36
SMARCA4-204ENST00000444061 MAGEA2P43356 314 aa12.8□□□□□ -0.36
SMARCA4-204ENST00000444061 RGS6P49758 472 aa12.8□□□□□ -0.36
SMARCA4-204ENST00000444061 CNN3Q15417 329 aaKnown RBP12.8□□□□□ -0.36
SMARCA4-204ENST00000444061 TBC1D28Q2M2D7 210 aa12.8□□□□□ -0.36
SMARCA4-204ENST00000444061 CHDHQ8NE62 594 aaPredicted RBP12.8□□□□□ -0.36
SMARCA4-204ENST00000444061 OR2T27Q8NH04 317 aa12.8□□□□□ -0.36
SMARCA4-204ENST00000444061 PIGCQ92535 297 aa12.8□□□□□ -0.36
SMARCA4-204ENST00000444061 LRFN5Q96NI6 719 aa12.8□□□□□ -0.36
SMARCA4-204ENST00000444061 MED29Q9NX70 200 aa12.8□□□□□ -0.36
SMARCA4-204ENST00000444061 NDRG4Q9ULP0 352 aaKnown RBP12.8□□□□□ -0.36
SMARCA4-204ENST00000444061 GREB1Q4ZG55 1949 aa12.8□□□□□ -0.36
SMARCA4-204ENST00000444061 PRICKLE3O43900 615 aaPredicted RBP12.8□□□□□ -0.36
SMARCA4-204ENST00000444061 SPINK2P20155 84 aa12.8□□□□□ -0.36
SMARCA4-204ENST00000444061 CDC20Q12834 499 aa12.8□□□□□ -0.36
SMARCA4-204ENST00000444061 PIAS4Q8N2W9 510 aaPredicted RBP12.8□□□□□ -0.36
SMARCA4-204ENST00000444061 MFSD8Q8NHS3 518 aa12.8□□□□□ -0.36
SMARCA4-204ENST00000444061 CST11Q9H112 138 aa12.8□□□□□ -0.36
SMARCA4-204ENST00000444061 WASF3Q9UPY6 502 aa12.8□□□□□ -0.36
SMARCA4-204ENST00000444061 TCF20Q9UGU0 1960 aaKnown RBP12.8□□□□□ -0.36
SMARCA4-204ENST00000444061 ASPDHA6ND91 283 aa12.8□□□□□ -0.36
SMARCA4-204ENST00000444061 DLGAP1O14490 977 aa12.8□□□□□ -0.36
SMARCA4-204ENST00000444061 FZD7O75084 574 aa12.8□□□□□ -0.36
SMARCA4-204ENST00000444061 RAB3AP20336 220 aa12.8□□□□□ -0.36
SMARCA4-204ENST00000444061 PSG6Q00889 435 aa12.8□□□□□ -0.36
SMARCA4-204ENST00000444061 CLN3Q13286 438 aa12.8□□□□□ -0.36
SMARCA4-204ENST00000444061 FZD5Q13467 585 aa12.8□□□□□ -0.36
SMARCA4-204ENST00000444061 ZNF321PQ8N8H1 164 aa12.8□□□□□ -0.36
SMARCA4-204ENST00000444061 ZCCHC14Q8WYQ9 949 aaKnown RBP12.8□□□□□ -0.36
SMARCA4-204ENST00000444061 PAPOLGQ9BWT3 736 aaKnown RBP12.8□□□□□ -0.36
SMARCA4-204ENST00000444061 C1QTNF6Q9BXI9 259 aa12.8□□□□□ -0.36
SMARCA4-204ENST00000444061 COL4A6Q14031 1691 aa12.8□□□□□ -0.36
SMARCA4-204ENST00000444061 HRKO00198 91 aa12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 WRBO00258 174 aa12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 MRPS14O60783 128 aaKnown RBP12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 HRGP04196 525 aa12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 MAKP20794 623 aa12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 MSR1P21757 451 aa12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 SLX4IPQ5VYV7 408 aa12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 ZNF620Q6ZNG0 422 aa12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 CALHM3Q86XJ0 350 aa12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 WFDC8Q8IUA0 241 aa12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 SAMD12Q8N8I0 201 aa12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 OR5D14Q8NGL3 314 aa12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 SGCDQ92629 289 aa12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 HRASLS5Q96KN8 279 aa12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 ATG5Q9H1Y0 275 aa12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 SLC6A15Q9H2J7 730 aa12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 MLXQ9UH92 298 aa12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 ZNF346Q9UL40 294 aaKnown RBP12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 B3GNT3Q9Y2A9 372 aa12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 FAM230AA0A1W2PPH8 454 aa12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 LRRN3E7EW58 273 aa12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 HTR3BO95264 441 aa12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 ETV5P41161 510 aa12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 NFATC3Q12968 1075 aa12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 RAB11BQ15907 218 aa12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 PLCXD3Q63HM9 321 aa12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 AWAT2Q6E213 333 aa12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 GLB1L2Q8IW92 636 aa12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 MSRB3Q8IXL7 192 aa12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 CISD2Q8N5K1 135 aaKnown RBP12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 BABAM2Q9NXR7 383 aa12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 DOK2O60496 412 aa12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 PTTG1O95997 202 aa12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 SDHAP31040 664 aa12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 EMC4Q5J8M3 183 aa12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 TMEM211Q6ICI0 200 aa12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 UGT2A3Q6UWM9 527 aa12.79□□□□□ -0.36
SMARCA4-204ENST00000444061 PCDHGA3Q9Y5H0 932 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms