RNA–Protein interactions for RNA: ENST00000440556.1

LINC02048-201, Transcript of long intergenic non-protein coding RNA 2048, humanhuman

TSL 5 BASIC

Gene LINC02048, Length 1,771 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02048-201ENST00000440556 KLK6Q92876 244 aa12.53□□□□□ -0.4
LINC02048-201ENST00000440556 C3orf49Q96BT1 292 aa12.53□□□□□ -0.4
LINC02048-201ENST00000440556 SMAD5Q99717 465 aaKnown RBP12.53□□□□□ -0.4
LINC02048-201ENST00000440556 PDCD1LG2Q9BQ51 273 aa12.53□□□□□ -0.4
LINC02048-201ENST00000440556 NMES1Q9C002 83 aa12.53□□□□□ -0.4
LINC02048-201ENST00000440556 CHMP1AQ9HD42 196 aaPredicted RBP12.53□□□□□ -0.4
LINC02048-201ENST00000440556 PARP11Q9NR21 331 aa12.53□□□□□ -0.4
LINC02048-201ENST00000440556 CYTL1Q9NRR1 136 aa12.53□□□□□ -0.4
LINC02048-201ENST00000440556 SIGLEC7Q9Y286 467 aa12.53□□□□□ -0.4
LINC02048-201ENST00000440556 ZNF443Q9Y2A4 671 aaPredicted RBP12.53□□□□□ -0.4
LINC02048-201ENST00000440556 TSPAN11A1L157 253 aa12.53□□□□□ -0.4
LINC02048-201ENST00000440556 ZNF840PA6NDX5 716 aa12.53□□□□□ -0.4
LINC02048-201ENST00000440556 TMEM202A6NGA9 273 aa12.53□□□□□ -0.4
LINC02048-201ENST00000440556 DUXAA6NLW8 204 aa12.53□□□□□ -0.4
LINC02048-201ENST00000440556 TAAR5O14804 337 aa12.53□□□□□ -0.4
LINC02048-201ENST00000440556 CDC40O60508 579 aaKnown RBP eCLIP12.53□□□□□ -0.4
LINC02048-201ENST00000440556 CTAG2O75638 210 aa12.53□□□□□ -0.4
LINC02048-201ENST00000440556 F10P00742 488 aa12.53□□□□□ -0.4
LINC02048-201ENST00000440556 IFNA2P01563 188 aa12.53□□□□□ -0.4
LINC02048-201ENST00000440556 FCGR3AP08637 254 aa12.53□□□□□ -0.4
LINC02048-201ENST00000440556 HPGDP15428 266 aa12.53□□□□□ -0.4
LINC02048-201ENST00000440556 MAKP20794 623 aa12.53□□□□□ -0.4
LINC02048-201ENST00000440556 MPZP25189 248 aa12.53□□□□□ -0.4
LINC02048-201ENST00000440556 CD1CP29017 333 aa12.53□□□□□ -0.4
LINC02048-201ENST00000440556 CTGFP29279 349 aa12.53□□□□□ -0.4
LINC02048-201ENST00000440556 MAP3K8P41279 467 aa12.53□□□□□ -0.4
LINC02048-201ENST00000440556 CX3CR1P49238 355 aa12.53□□□□□ -0.4
LINC02048-201ENST00000440556 PRKAG1P54619 331 aa12.53□□□□□ -0.4
LINC02048-201ENST00000440556 HTRA4P83105 476 aaPredicted RBP12.53□□□□□ -0.4
LINC02048-201ENST00000440556 FOXO1Q12778 655 aa12.53□□□□□ -0.4
LINC02048-201ENST00000440556 MEF2DQ14814 521 aa12.53□□□□□ -0.4
LINC02048-201ENST00000440556 NKAIN2Q5VXU1 208 aa12.53□□□□□ -0.4
LINC02048-201ENST00000440556 RFLNAQ6ZTI6 216 aa12.53□□□□□ -0.4
LINC02048-201ENST00000440556 OLIG3Q7RTU3 272 aa12.53□□□□□ -0.4
LINC02048-201ENST00000440556 TMED4Q7Z7H5 227 aa12.53□□□□□ -0.4
LINC02048-201ENST00000440556 ZDHHC22Q8N966 263 aa12.53□□□□□ -0.4
LINC02048-201ENST00000440556 MITD1Q8WV92 249 aa12.53□□□□□ -0.4
LINC02048-201ENST00000440556 TMED6Q8WW62 240 aa12.53□□□□□ -0.4
LINC02048-201ENST00000440556 MYLIPQ8WY64 445 aa12.53□□□□□ -0.4
LINC02048-201ENST00000440556 RSC1A1Q92681 617 aa12.53□□□□□ -0.4
LINC02048-201ENST00000440556 CPNE2Q96FN4 548 aaPredicted RBP12.53□□□□□ -0.4
LINC02048-201ENST00000440556 F2RL3Q96RI0 385 aa12.53□□□□□ -0.4
LINC02048-201ENST00000440556 PRSS27Q9BQR3 290 aa12.53□□□□□ -0.4
LINC02048-201ENST00000440556 HRH4Q9H3N8 390 aa12.53□□□□□ -0.4
LINC02048-201ENST00000440556 PRSS16Q9NQE7 514 aa12.53□□□□□ -0.4
LINC02048-201ENST00000440556 CLDND1Q9NY35 253 aa12.53□□□□□ -0.4
LINC02048-201ENST00000440556 SERTAD3Q9UJW9 196 aa12.53□□□□□ -0.4
LINC02048-201ENST00000440556 PADI3Q9ULW8 664 aa12.53□□□□□ -0.4
LINC02048-201ENST00000440556 TP53TG5Q9Y2B4 290 aa12.53□□□□□ -0.4
LINC02048-201ENST00000440556 SLC27A6Q9Y2P4 619 aa12.53□□□□□ -0.4
LINC02048-201ENST00000440556 FAM96BQ9Y3D0 163 aa12.53□□□□□ -0.4
LINC02048-201ENST00000440556 MTX2O75431 263 aa12.52□□□□□ -0.41
LINC02048-201ENST00000440556 NTN1O95631 604 aa12.52□□□□□ -0.41
LINC02048-201ENST00000440556 LY86O95711 162 aa12.52□□□□□ -0.41
LINC02048-201ENST00000440556 HLA-AP01891 365 aaKnown RBP12.52□□□□□ -0.41
LINC02048-201ENST00000440556 ADH1AP07327 375 aa12.52□□□□□ -0.41
LINC02048-201ENST00000440556 PGAM2P15259 253 aa12.52□□□□□ -0.41
LINC02048-201ENST00000440556 CSRP1P21291 193 aaKnown RBP12.52□□□□□ -0.41
LINC02048-201ENST00000440556 ZBTB25P24278 435 aa12.52□□□□□ -0.41
LINC02048-201ENST00000440556 DDTP30046 118 aa12.52□□□□□ -0.41
LINC02048-201ENST00000440556 CEACAM6P40199 344 aa12.52□□□□□ -0.41
LINC02048-201ENST00000440556 GSK3AP49840 483 aa12.52□□□□□ -0.41
LINC02048-201ENST00000440556 SRSF5Q13243 272 aaKnown RBP12.52□□□□□ -0.41
LINC02048-201ENST00000440556 ATXN7L3Q14CW9 347 aaPredicted RBP12.52□□□□□ -0.41
LINC02048-201ENST00000440556 ELAVL1Q15717 326 aaKnown RBP12.52□□□□□ -0.41
LINC02048-201ENST00000440556 AMZ1Q400G9 498 aa12.52□□□□□ -0.41
LINC02048-201ENST00000440556 LRRC37A5PQ49AS3 106 aa12.52□□□□□ -0.41
LINC02048-201ENST00000440556 PYY3Q5JQD4 70 aa12.52□□□□□ -0.41
LINC02048-201ENST00000440556 KRBOX4Q5JUW0 171 aa12.52□□□□□ -0.41
LINC02048-201ENST00000440556 GLB1LQ6UWU2 654 aa12.52□□□□□ -0.41
LINC02048-201ENST00000440556 DPPA4Q7L190 304 aa12.52□□□□□ -0.41
LINC02048-201ENST00000440556 HMGN2P46Q86SG4 172 aa12.52□□□□□ -0.41
LINC02048-201ENST00000440556 PNLDC1Q8NA58 520 aaKnown RBP12.52□□□□□ -0.41
LINC02048-201ENST00000440556 ZNF740Q8NDX6 193 aa12.52□□□□□ -0.41
LINC02048-201ENST00000440556 NECAB3Q96P71 396 aaPredicted RBP12.52□□□□□ -0.41
LINC02048-201ENST00000440556 SYT4Q9H2B2 425 aa12.52□□□□□ -0.41
LINC02048-201ENST00000440556 RGCCQ9H4X1 137 aa12.52□□□□□ -0.41
LINC02048-201ENST00000440556 SYNPO2LQ9H987 977 aa12.52□□□□□ -0.41
LINC02048-201ENST00000440556 BCO1Q9HAY6 547 aa12.52□□□□□ -0.41
LINC02048-201ENST00000440556 DUSP22Q9NRW4 184 aa12.52□□□□□ -0.41
LINC02048-201ENST00000440556 B4GALT6Q9UBX8 382 aa12.52□□□□□ -0.41
LINC02048-201ENST00000440556 KCNE5Q9UJ90 142 aa12.52□□□□□ -0.41
LINC02048-201ENST00000440556 PRG3Q9Y2Y8 225 aaPredicted RBP12.52□□□□□ -0.41
LINC02048-201ENST00000440556 ADAM18Q9Y3Q7 739 aa12.52□□□□□ -0.41
LINC02048-201ENST00000440556 DENND4CQ5VZ89 1909 aa12.52□□□□□ -0.41
LINC02048-201ENST00000440556 CENPFP49454 3210 aa12.52□□□□□ -0.41
LINC02048-201ENST00000440556 TRAV18A0A075B6X5 111 aa12.51□□□□□ -0.41
LINC02048-201ENST00000440556 TRBV5-5A0A0J9YX44 114 aa12.51□□□□□ -0.41
LINC02048-201ENST00000440556 C7orf77A4D0Y5 90 aa12.51□□□□□ -0.41
LINC02048-201ENST00000440556 SEC14L6B5MCN3 397 aa12.51□□□□□ -0.41
LINC02048-201ENST00000440556 FAM157AC9JC47 383 aa12.51□□□□□ -0.41
LINC02048-201ENST00000440556 H7C4K7 107 aa12.51□□□□□ -0.41
LINC02048-201ENST00000440556 ADAM10O14672 748 aa12.51□□□□□ -0.41
LINC02048-201ENST00000440556 NDUFS4O43181 175 aa12.51□□□□□ -0.41
LINC02048-201ENST00000440556 POP4O95707 220 aaKnown RBP12.51□□□□□ -0.41
LINC02048-201ENST00000440556 CRHP06850 196 aa12.51□□□□□ -0.41
LINC02048-201ENST00000440556 THBS1P07996 1170 aa12.51□□□□□ -0.41
LINC02048-201ENST00000440556 AKR1A1P14550 325 aa12.51□□□□□ -0.41
LINC02048-201ENST00000440556 NOGQ13253 232 aa12.51□□□□□ -0.41
LINC02048-201ENST00000440556 ALKBH1Q13686 389 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms