RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 RPL4P36578 427 aaKnown RBP17.07■□□□□ 0.32
SEMA3B-206ENST00000439487 PRPS1P60891 318 aa17.07■□□□□ 0.32
SEMA3B-206ENST00000439487 BEX5Q5H9J7 111 aa17.07■□□□□ 0.32
SEMA3B-206ENST00000439487 ARMC4Q5T2S8 1044 aa17.07■□□□□ 0.32
SEMA3B-206ENST00000439487 CDC20BQ86Y33 519 aa17.07■□□□□ 0.32
SEMA3B-206ENST00000439487 BCL2L2Q92843 193 aaPredicted RBP17.07■□□□□ 0.32
SEMA3B-206ENST00000439487 PLPPR2Q96GM1 343 aa17.07■□□□□ 0.32
SEMA3B-206ENST00000439487 HS3ST6Q96QI5 342 aa17.07■□□□□ 0.32
SEMA3B-206ENST00000439487 ULBP2Q9BZM5 246 aa17.07■□□□□ 0.32
SEMA3B-206ENST00000439487 REEP1Q9H902 201 aa17.07■□□□□ 0.32
SEMA3B-206ENST00000439487 SIGLEC7Q9Y286 467 aa17.07■□□□□ 0.32
SEMA3B-206ENST00000439487 SLC25A15Q9Y619 301 aa17.07■□□□□ 0.32
SEMA3B-206ENST00000439487 U3KQV3 271 aa17.07■□□□□ 0.32
SEMA3B-206ENST00000439487 PDZD2O15018 2839 aa17.07■□□□□ 0.32
SEMA3B-206ENST00000439487 A0A1W2PPR1 153 aa17.06■□□□□ 0.32
SEMA3B-206ENST00000439487 FKBP6O75344 327 aa17.06■□□□□ 0.32
SEMA3B-206ENST00000439487 SEC14L2O76054 403 aa17.06■□□□□ 0.32
SEMA3B-206ENST00000439487 CST1P01037 141 aa17.06■□□□□ 0.32
SEMA3B-206ENST00000439487 IGHG1P01857 330 aa17.06■□□□□ 0.32
SEMA3B-206ENST00000439487 PGA4P0DJD7 388 aa17.06■□□□□ 0.32
SEMA3B-206ENST00000439487 PGA3P0DJD8 388 aa17.06■□□□□ 0.32
SEMA3B-206ENST00000439487 ACADSP16219 412 aa17.06■□□□□ 0.32
SEMA3B-206ENST00000439487 IFNGR2P38484 337 aa17.06■□□□□ 0.32
SEMA3B-206ENST00000439487 CLRN1P58418 232 aa17.06■□□□□ 0.32
SEMA3B-206ENST00000439487 RPL27P61353 136 aaKnown RBP17.06■□□□□ 0.32
SEMA3B-206ENST00000439487 ERVK-25P63136 954 aa17.06■□□□□ 0.32
SEMA3B-206ENST00000439487 MYBPC1Q00872 1141 aa17.06■□□□□ 0.32
SEMA3B-206ENST00000439487 TBRG1Q3YBR2 411 aa17.06■□□□□ 0.32
SEMA3B-206ENST00000439487 C1orf146Q5VVC0 180 aa17.06■□□□□ 0.32
SEMA3B-206ENST00000439487 C1orf94Q6P1W5 598 aa17.06■□□□□ 0.32
SEMA3B-206ENST00000439487 PGBD2Q6P3X8 592 aa17.06■□□□□ 0.32
SEMA3B-206ENST00000439487 LRFN4Q6PJG9 635 aa17.06■□□□□ 0.32
SEMA3B-206ENST00000439487 C17orf78Q8N4C9 275 aa17.06■□□□□ 0.32
SEMA3B-206ENST00000439487 SYT14Q8NB59 555 aa17.06■□□□□ 0.32
SEMA3B-206ENST00000439487 OR9Q2Q8NGE9 314 aa17.06■□□□□ 0.32
SEMA3B-206ENST00000439487 GNPDA2Q8TDQ7 276 aa17.06■□□□□ 0.32
SEMA3B-206ENST00000439487 NRGNQ92686 78 aa17.06■□□□□ 0.32
SEMA3B-206ENST00000439487 SLCO4A1Q96BD0 722 aa17.06■□□□□ 0.32
SEMA3B-206ENST00000439487 TSPAN32Q96QS1 320 aa17.06■□□□□ 0.32
SEMA3B-206ENST00000439487 KATNB1Q9BVA0 655 aa17.06■□□□□ 0.32
SEMA3B-206ENST00000439487 C1QTNF6Q9BXI9 259 aa17.06■□□□□ 0.32
SEMA3B-206ENST00000439487 NELFAQ9H3P2 528 aa17.06■□□□□ 0.32
SEMA3B-206ENST00000439487 NPAP1Q9NZP6 1156 aa17.06■□□□□ 0.32
SEMA3B-206ENST00000439487 IL20RAQ9UHF4 553 aa17.06■□□□□ 0.32
SEMA3B-206ENST00000439487 SAMHD1Q9Y3Z3 626 aaKnown RBP17.06■□□□□ 0.32
SEMA3B-206ENST00000439487 RTTNQ86VV8 2226 aa17.06■□□□□ 0.32
SEMA3B-206ENST00000439487 NPIPB13A6NJU9 1138 aa17.05■□□□□ 0.32
SEMA3B-206ENST00000439487 ZNF99A8MXY4 864 aaPredicted RBP17.05■□□□□ 0.32
SEMA3B-206ENST00000439487 NPIPB4C9JG80 1138 aa17.05■□□□□ 0.32
SEMA3B-206ENST00000439487 CCNB2O95067 398 aa17.05■□□□□ 0.32
SEMA3B-206ENST00000439487 NDUFB2O95178 105 aa17.05■□□□□ 0.32
SEMA3B-206ENST00000439487 IGHMP01871 453 aa17.05■□□□□ 0.32
SEMA3B-206ENST00000439487 HOXC12P31275 282 aa17.05■□□□□ 0.32
SEMA3B-206ENST00000439487 ACVR1BP36896 505 aa17.05■□□□□ 0.32
SEMA3B-206ENST00000439487 GSSP48637 474 aa17.05■□□□□ 0.32
SEMA3B-206ENST00000439487 SH3BGRP55822 239 aaPredicted RBP17.05■□□□□ 0.32
SEMA3B-206ENST00000439487 FXYD6P3P58550 94 aa17.05■□□□□ 0.32
SEMA3B-206ENST00000439487 TAF11Q15544 211 aa17.05■□□□□ 0.32
SEMA3B-206ENST00000439487 ANKRD16Q6P6B7 361 aa17.05■□□□□ 0.32
SEMA3B-206ENST00000439487 THSD4Q6ZMP0 1018 aa17.05■□□□□ 0.32
SEMA3B-206ENST00000439487 HDDC2Q7Z4H3 204 aa17.05■□□□□ 0.32
SEMA3B-206ENST00000439487 NOXO1Q8NFA2 376 aa17.05■□□□□ 0.32
SEMA3B-206ENST00000439487 HDAC2Q92769 488 aaKnown RBP17.05■□□□□ 0.32
SEMA3B-206ENST00000439487 UTP4Q969X6 686 aaKnown RBP17.05■□□□□ 0.32
SEMA3B-206ENST00000439487 BOD1Q96IK1 185 aa17.05■□□□□ 0.32
SEMA3B-206ENST00000439487 MRPL13Q9BYD1 178 aaKnown RBP17.05■□□□□ 0.32
SEMA3B-206ENST00000439487 NGBQ9NPG2 151 aa17.05■□□□□ 0.32
SEMA3B-206ENST00000439487 CCM2LQ9NUG4 571 aaPredicted RBP17.05■□□□□ 0.32
SEMA3B-206ENST00000439487 POFUT2Q9Y2G5 429 aa17.05■□□□□ 0.32
SEMA3B-206ENST00000439487 AMDHD2Q9Y303 409 aa17.05■□□□□ 0.32
SEMA3B-206ENST00000439487 RAI1Q7Z5J4 1906 aaPredicted RBP17.05■□□□□ 0.32
SEMA3B-206ENST00000439487 DPRXA6NFQ7 191 aa17.04■□□□□ 0.32
SEMA3B-206ENST00000439487 CD14P08571 375 aa17.04■□□□□ 0.32
SEMA3B-206ENST00000439487 QDPRP09417 244 aa17.04■□□□□ 0.32
SEMA3B-206ENST00000439487 FPR3P25089 353 aa17.04■□□□□ 0.32
SEMA3B-206ENST00000439487 ZNF83P51522 516 aa17.04■□□□□ 0.32
SEMA3B-206ENST00000439487 TUBA1BP68363 451 aa17.04■□□□□ 0.32
SEMA3B-206ENST00000439487 TUBA4AP68366 448 aa17.04■□□□□ 0.32
SEMA3B-206ENST00000439487 HIST3H3Q16695 136 aa17.04■□□□□ 0.32
SEMA3B-206ENST00000439487 NCMAPQ5T1S8 102 aa17.04■□□□□ 0.32
SEMA3B-206ENST00000439487 ZNF770Q6IQ21 691 aaPredicted RBP17.04■□□□□ 0.32
SEMA3B-206ENST00000439487 KLHL24Q6TFL4 600 aa17.04■□□□□ 0.32
SEMA3B-206ENST00000439487 TUBA1AQ71U36 451 aa17.04■□□□□ 0.32
SEMA3B-206ENST00000439487 LINC00471Q8N535 108 aa17.04■□□□□ 0.32
SEMA3B-206ENST00000439487 PAPD5Q8NDF8 572 aaKnown RBP17.04■□□□□ 0.32
SEMA3B-206ENST00000439487 NDEL1Q9GZM8 345 aa17.04■□□□□ 0.32
SEMA3B-206ENST00000439487 STX18Q9P2W9 335 aaKnown RBP17.04■□□□□ 0.32
SEMA3B-206ENST00000439487 ADAM18Q9Y3Q7 739 aa17.04■□□□□ 0.32
SEMA3B-206ENST00000439487 CENPBD1B2RD01 187 aa17.03■□□□□ 0.32
SEMA3B-206ENST00000439487 GNGT2O14610 69 aa17.03■□□□□ 0.32
SEMA3B-206ENST00000439487 DHHO43323 396 aa17.03■□□□□ 0.32
SEMA3B-206ENST00000439487 CIB2O75838 187 aa17.03■□□□□ 0.32
SEMA3B-206ENST00000439487 PLAUP00749 431 aa17.03■□□□□ 0.32
SEMA3B-206ENST00000439487 GASTP01350 101 aa17.03■□□□□ 0.32
SEMA3B-206ENST00000439487 HOXB6P17509 224 aaKnown RBP17.03■□□□□ 0.32
SEMA3B-206ENST00000439487 IST1P53990 364 aa17.03■□□□□ 0.32
SEMA3B-206ENST00000439487 NR1H2P55055 460 aa17.03■□□□□ 0.32
SEMA3B-206ENST00000439487 UBE2NP61088 152 aaKnown RBP17.03■□□□□ 0.32
SEMA3B-206ENST00000439487 TSPAN31Q12999 210 aa17.03■□□□□ 0.32
SEMA3B-206ENST00000439487 CCNIQ14094 377 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms