RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 SLC25A1P53007 311 aa18.38■□□□□ 0.53
CHD3-204ENST00000439235 CASP6P55212 293 aa18.38■□□□□ 0.53
CHD3-204ENST00000439235 LCN6P62502 163 aa18.38■□□□□ 0.53
CHD3-204ENST00000439235 CDK5R2Q13319 367 aa18.38■□□□□ 0.53
CHD3-204ENST00000439235 CAMK2DQ13557 499 aa18.38■□□□□ 0.53
CHD3-204ENST00000439235 NXNL2Q5VZ03 156 aa18.38■□□□□ 0.53
CHD3-204ENST00000439235 DNM1P34Q6PK57 102 aa18.38■□□□□ 0.53
CHD3-204ENST00000439235 B3GNT6Q6ZMB0 384 aa18.38■□□□□ 0.53
CHD3-204ENST00000439235 CPOQ8IVL8 374 aa18.38■□□□□ 0.53
CHD3-204ENST00000439235 TUSC5Q8IXB3 177 aa18.38■□□□□ 0.53
CHD3-204ENST00000439235 C9orf106Q8NAJ2 232 aa18.38■□□□□ 0.53
CHD3-204ENST00000439235 APH1BQ8WW43 257 aa18.38■□□□□ 0.53
CHD3-204ENST00000439235 RFKQ969G6 155 aa18.38■□□□□ 0.53
CHD3-204ENST00000439235 ZFP3Q96NJ6 502 aa18.38■□□□□ 0.53
CHD3-204ENST00000439235 KCNK17Q96T54 332 aa18.38■□□□□ 0.53
CHD3-204ENST00000439235 DNAJC27Q9NZQ0 273 aa18.38■□□□□ 0.53
CHD3-204ENST00000439235 CLEC4AQ9UMR7 237 aa18.38■□□□□ 0.53
CHD3-204ENST00000439235 FAM215AQ9Y5M1 114 aa18.38■□□□□ 0.53
CHD3-204ENST00000439235 SLC22A23A1A5C7 686 aa18.37■□□□□ 0.53
CHD3-204ENST00000439235 SH3D21A4FU49 640 aa18.37■□□□□ 0.53
CHD3-204ENST00000439235 OR6C68A6NDL8 312 aa18.37■□□□□ 0.53
CHD3-204ENST00000439235 FAM183AA6NL82 134 aa18.37■□□□□ 0.53
CHD3-204ENST00000439235 KDM4EB2RXH2 506 aaPredicted RBP18.37■□□□□ 0.53
CHD3-204ENST00000439235 MRPL33O75394 65 aaKnown RBP18.37■□□□□ 0.53
CHD3-204ENST00000439235 AGTR1P30556 359 aa18.37■□□□□ 0.53
CHD3-204ENST00000439235 CSNK1A1P48729 337 aa18.37■□□□□ 0.53
CHD3-204ENST00000439235 RUNX1T1Q06455 604 aa18.37■□□□□ 0.53
CHD3-204ENST00000439235 LGALS3BPQ08380 585 aa18.37■□□□□ 0.53
CHD3-204ENST00000439235 AADACL4Q5VUY2 407 aa18.37■□□□□ 0.53
CHD3-204ENST00000439235 CARD17Q5XLA6 110 aa18.37■□□□□ 0.53
CHD3-204ENST00000439235 RTL6Q6ICC9 239 aa18.37■□□□□ 0.53
CHD3-204ENST00000439235 DOLPP1Q86YN1 238 aa18.37■□□□□ 0.53
CHD3-204ENST00000439235 TMEM123Q8N131 208 aa18.37■□□□□ 0.53
CHD3-204ENST00000439235 OR6N1Q8NGY5 312 aa18.37■□□□□ 0.53
CHD3-204ENST00000439235 OR2T4Q8NH00 348 aa18.37■□□□□ 0.53
CHD3-204ENST00000439235 ZNF775Q96BV0 537 aaPredicted RBP18.37■□□□□ 0.53
CHD3-204ENST00000439235 INTS12Q96CB8 462 aaKnown RBP18.37■□□□□ 0.53
CHD3-204ENST00000439235 ZNF582Q96NG8 517 aaPredicted RBP18.37■□□□□ 0.53
CHD3-204ENST00000439235 RBP7Q96R05 134 aa18.37■□□□□ 0.53
CHD3-204ENST00000439235 DDOQ99489 341 aa18.37■□□□□ 0.53
CHD3-204ENST00000439235 MRPL13Q9BYD1 178 aaKnown RBP18.37■□□□□ 0.53
CHD3-204ENST00000439235 SYT4Q9H2B2 425 aa18.37■□□□□ 0.53
CHD3-204ENST00000439235 RPRD1BQ9NQG5 326 aaKnown RBP18.37■□□□□ 0.53
CHD3-204ENST00000439235 UBAP1Q9NZ09 502 aa18.37■□□□□ 0.53
CHD3-204ENST00000439235 EMC9Q9Y3B6 208 aa18.37■□□□□ 0.53
CHD3-204ENST00000439235 OR6C65A6NJZ3 312 aa18.36■□□□□ 0.53
CHD3-204ENST00000439235 PRODHO43272 600 aa18.36■□□□□ 0.53
CHD3-204ENST00000439235 WBP4O75554 376 aaKnown RBP18.36■□□□□ 0.53
CHD3-204ENST00000439235 ZNF432O94892 652 aa18.36■□□□□ 0.53
CHD3-204ENST00000439235 CRHP06850 196 aa18.36■□□□□ 0.53
CHD3-204ENST00000439235 CRABP1P29762 137 aa18.36■□□□□ 0.53
CHD3-204ENST00000439235 TIMP3P35625 211 aa18.36■□□□□ 0.53
CHD3-204ENST00000439235 SELENOPP49908 381 aa18.36■□□□□ 0.53
CHD3-204ENST00000439235 PER3P56645 1201 aa18.36■□□□□ 0.53
CHD3-204ENST00000439235 CSNK2BP67870 215 aa18.36■□□□□ 0.53
CHD3-204ENST00000439235 SYT14Q8NB59 555 aa18.36■□□□□ 0.53
CHD3-204ENST00000439235 NBEAQ8NFP9 2946 aa18.36■□□□□ 0.53
CHD3-204ENST00000439235 OR9Q1Q8NGQ5 310 aa18.36■□□□□ 0.53
CHD3-204ENST00000439235 NMNAT2Q9BZQ4 307 aa18.36■□□□□ 0.53
CHD3-204ENST00000439235 B3GAT2Q9NPZ5 323 aa18.36■□□□□ 0.53
CHD3-204ENST00000439235 ASB6Q9NWX5 421 aa18.36■□□□□ 0.53
CHD3-204ENST00000439235 FKBP7Q9Y680 259 aa18.36■□□□□ 0.53
CHD3-204ENST00000439235 DNAJC13O75165 2243 aa18.35■□□□□ 0.53
CHD3-204ENST00000439235 ENTPD6O75354 484 aa18.35■□□□□ 0.53
CHD3-204ENST00000439235 IL2RAP01589 272 aa18.35■□□□□ 0.53
CHD3-204ENST00000439235 SPI1P17947 270 aa18.35■□□□□ 0.53
CHD3-204ENST00000439235 CDH11P55287 796 aa18.35■□□□□ 0.53
CHD3-204ENST00000439235 CXCR4P61073 352 aa18.35■□□□□ 0.53
CHD3-204ENST00000439235 SOWAHCQ53LP3 525 aaPredicted RBP18.35■□□□□ 0.53
CHD3-204ENST00000439235 SLC35D3Q5M8T2 416 aa18.35■□□□□ 0.53
CHD3-204ENST00000439235 C6orf141Q5SZD1 244 aa18.35■□□□□ 0.53
CHD3-204ENST00000439235 THEM4Q5T1C6 240 aa18.35■□□□□ 0.53
CHD3-204ENST00000439235 LCN1P1Q5VSP4 162 aa18.35■□□□□ 0.53
CHD3-204ENST00000439235 FAM214BQ7L5A3 538 aa18.35■□□□□ 0.53
CHD3-204ENST00000439235 WDFY1Q8IWB7 410 aa18.35■□□□□ 0.53
CHD3-204ENST00000439235 C20orf196Q8IYI0 205 aa18.35■□□□□ 0.53
CHD3-204ENST00000439235 ZNF786Q8N393 782 aa18.35■□□□□ 0.53
CHD3-204ENST00000439235 TMEM54Q969K7 222 aa18.35■□□□□ 0.53
CHD3-204ENST00000439235 HCAR1Q9BXC0 346 aa18.35■□□□□ 0.53
CHD3-204ENST00000439235 OR51V1Q9H2C8 321 aa18.35■□□□□ 0.53
CHD3-204ENST00000439235 MED20Q9H944 212 aa18.35■□□□□ 0.53
CHD3-204ENST00000439235 GLTPQ9NZD2 209 aa18.35■□□□□ 0.53
CHD3-204ENST00000439235 AASSQ9UDR5 926 aa18.35■□□□□ 0.53
CHD3-204ENST00000439235 TINAGQ9UJW2 476 aa18.35■□□□□ 0.53
CHD3-204ENST00000439235 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.35■□□□□ 0.53
CHD3-204ENST00000439235 SLC22A31A6NKX4 558 aa18.34■□□□□ 0.53
CHD3-204ENST00000439235 FMO3P31513 532 aa18.34■□□□□ 0.53
CHD3-204ENST00000439235 RPS7P62081 194 aaKnown RBP18.34■□□□□ 0.53
CHD3-204ENST00000439235 TMED1Q13445 227 aa18.34■□□□□ 0.53
CHD3-204ENST00000439235 GUSBP1Q15486 140 aa18.34■□□□□ 0.53
CHD3-204ENST00000439235 HIST3H3Q16695 136 aa18.34■□□□□ 0.53
CHD3-204ENST00000439235 KLHL12Q53G59 568 aa18.34■□□□□ 0.53
CHD3-204ENST00000439235 RBM48Q5RL73 367 aaKnown RBP18.34■□□□□ 0.53
CHD3-204ENST00000439235 SEM1Q6ZVN7 128 aa18.34■□□□□ 0.53
CHD3-204ENST00000439235 BCDIN3DQ7Z5W3 292 aaKnown RBP18.34■□□□□ 0.53
CHD3-204ENST00000439235 ZNF100Q8IYN0 542 aa18.34■□□□□ 0.53
CHD3-204ENST00000439235 GCNT2Q8N0V5 402 aa18.34■□□□□ 0.53
CHD3-204ENST00000439235 PROKR2Q8NFJ6 384 aa18.34■□□□□ 0.53
CHD3-204ENST00000439235 BBS1Q8NFJ9 593 aa18.34■□□□□ 0.53
CHD3-204ENST00000439235 PTP4A1Q93096 173 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms