RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 TPOP07202 933 aa12.59□□□□□ -0.39
PTCHD3-201ENST00000438700 CD53P19397 219 aa12.59□□□□□ -0.39
PTCHD3-201ENST00000438700 RAB3BP20337 219 aa12.59□□□□□ -0.39
PTCHD3-201ENST00000438700 EDNRAP25101 427 aa12.59□□□□□ -0.39
PTCHD3-201ENST00000438700 STOMP27105 288 aa12.59□□□□□ -0.39
PTCHD3-201ENST00000438700 GIFP27352 417 aa12.59□□□□□ -0.39
PTCHD3-201ENST00000438700 CDKN2AP42771 156 aaKnown RBP12.59□□□□□ -0.39
PTCHD3-201ENST00000438700 GRK6P43250 576 aa12.59□□□□□ -0.39
PTCHD3-201ENST00000438700 DIO1P49895 249 aa12.59□□□□□ -0.39
PTCHD3-201ENST00000438700 GBX2P52951 348 aaPredicted RBP12.59□□□□□ -0.39
PTCHD3-201ENST00000438700 RPS4XP62701 263 aaKnown RBP12.59□□□□□ -0.39
PTCHD3-201ENST00000438700 SIRPAP78324 504 aa12.59□□□□□ -0.39
PTCHD3-201ENST00000438700 LGALS3BPQ08380 585 aa12.59□□□□□ -0.39
PTCHD3-201ENST00000438700 AANATQ16613 207 aa12.59□□□□□ -0.39
PTCHD3-201ENST00000438700 FNDC7Q5VTL7 733 aa12.59□□□□□ -0.39
PTCHD3-201ENST00000438700 WBP2NLQ6ICG8 309 aa12.59□□□□□ -0.39
PTCHD3-201ENST00000438700 ESPNLQ6ZVH7 1005 aa12.59□□□□□ -0.39
PTCHD3-201ENST00000438700 C9orf40Q8IXQ3 194 aa12.59□□□□□ -0.39
PTCHD3-201ENST00000438700 MS4A15Q8N5U1 240 aa12.59□□□□□ -0.39
PTCHD3-201ENST00000438700 PLPP5Q8NEB5 264 aa12.59□□□□□ -0.39
PTCHD3-201ENST00000438700 FAM71CQ8NEG0 241 aa12.59□□□□□ -0.39
PTCHD3-201ENST00000438700 ZNF563Q8TA94 476 aa12.59□□□□□ -0.39
PTCHD3-201ENST00000438700 ADIPOR1Q96A54 375 aa12.59□□□□□ -0.39
PTCHD3-201ENST00000438700 DACT3Q96B18 629 aaPredicted RBP12.59□□□□□ -0.39
PTCHD3-201ENST00000438700 SORCS2Q96PQ0 1159 aa12.59□□□□□ -0.39
PTCHD3-201ENST00000438700 MESP1Q9BRJ9 268 aa12.59□□□□□ -0.39
PTCHD3-201ENST00000438700 B3GNT4Q9C0J1 378 aa12.59□□□□□ -0.39
PTCHD3-201ENST00000438700 C12orf4Q9NQ89 552 aa12.59□□□□□ -0.39
PTCHD3-201ENST00000438700 CACNG2Q9Y698 323 aa12.59□□□□□ -0.39
PTCHD3-201ENST00000438700 IGHV3-20A0A0C4DH32 117 aa12.58□□□□□ -0.4
PTCHD3-201ENST00000438700 FRG2CA6NGY1 282 aa12.58□□□□□ -0.4
PTCHD3-201ENST00000438700 H7C1C5 153 aa12.58□□□□□ -0.4
PTCHD3-201ENST00000438700 TSPAN4O14817 238 aa12.58□□□□□ -0.4
PTCHD3-201ENST00000438700 KHNYNO15037 678 aaKnown RBP12.58□□□□□ -0.4
PTCHD3-201ENST00000438700 ZNF264O43296 627 aa12.58□□□□□ -0.4
PTCHD3-201ENST00000438700 ICOSLGO75144 302 aa12.58□□□□□ -0.4
PTCHD3-201ENST00000438700 AHCYP23526 432 aa12.58□□□□□ -0.4
PTCHD3-201ENST00000438700 LCN6P62502 163 aa12.58□□□□□ -0.4
PTCHD3-201ENST00000438700 DCDP81605 110 aaKnown RBP12.58□□□□□ -0.4
PTCHD3-201ENST00000438700 EGR4Q05215 589 aa12.58□□□□□ -0.4
PTCHD3-201ENST00000438700 GGTLC2Q14390 218 aa12.58□□□□□ -0.4
PTCHD3-201ENST00000438700 EBPQ15125 230 aaKnown RBP12.58□□□□□ -0.4
PTCHD3-201ENST00000438700 ZNF74Q16587 644 aa12.58□□□□□ -0.4
PTCHD3-201ENST00000438700 ATG4DQ86TL0 474 aaPredicted RBP12.58□□□□□ -0.4
PTCHD3-201ENST00000438700 CDH24Q86UP0 819 aa12.58□□□□□ -0.4
PTCHD3-201ENST00000438700 TPRA1Q86W33 373 aa12.58□□□□□ -0.4
PTCHD3-201ENST00000438700 ZNF511Q8NB15 262 aa12.58□□□□□ -0.4
PTCHD3-201ENST00000438700 PMEPA1Q969W9 287 aa12.58□□□□□ -0.4
PTCHD3-201ENST00000438700 LCORQ96JN0 433 aaPredicted RBP12.58□□□□□ -0.4
PTCHD3-201ENST00000438700 RBP7Q96R05 134 aa12.58□□□□□ -0.4
PTCHD3-201ENST00000438700 NCDNQ9UBB6 729 aa12.58□□□□□ -0.4
PTCHD3-201ENST00000438700 COPS7AQ9UBW8 275 aa12.58□□□□□ -0.4
PTCHD3-201ENST00000438700 MRPS7Q9Y2R9 242 aaKnown RBP12.58□□□□□ -0.4
PTCHD3-201ENST00000438700 AUP1Q9Y679 476 aa12.58□□□□□ -0.4
PTCHD3-201ENST00000438700 PCNX3Q9H6A9 2034 aa12.58□□□□□ -0.4
PTCHD3-201ENST00000438700 TEX51A0A1B0GUA7 166 aa12.58□□□□□ -0.4
PTCHD3-201ENST00000438700 IL33O95760 270 aa12.58□□□□□ -0.4
PTCHD3-201ENST00000438700 SNRPBP14678 240 aaKnown RBP12.58□□□□□ -0.4
PTCHD3-201ENST00000438700 PTBP1P26599 531 aaKnown RBP eCLIP12.58□□□□□ -0.4
PTCHD3-201ENST00000438700 PRPS1P60891 318 aa12.58□□□□□ -0.4
PTCHD3-201ENST00000438700 SLC36A2Q495M3 483 aa12.58□□□□□ -0.4
PTCHD3-201ENST00000438700 BICRALQ6AI39 1079 aa12.58□□□□□ -0.4
PTCHD3-201ENST00000438700 LSM14AQ8ND56 463 aaKnown RBP12.58□□□□□ -0.4
PTCHD3-201ENST00000438700 KTI12Q96EK9 354 aaPredicted RBP12.58□□□□□ -0.4
PTCHD3-201ENST00000438700 DDOQ99489 341 aa12.58□□□□□ -0.4
PTCHD3-201ENST00000438700 OR51J1Q9H342 316 aa12.58□□□□□ -0.4
PTCHD3-201ENST00000438700 A0A087WV48 116 aa12.57□□□□□ -0.4
PTCHD3-201ENST00000438700 PRR32B1ATL7 298 aa12.57□□□□□ -0.4
PTCHD3-201ENST00000438700 ARPC3O15145 178 aa12.57□□□□□ -0.4
PTCHD3-201ENST00000438700 TCRBP04435 133 aa12.57□□□□□ -0.4
PTCHD3-201ENST00000438700 ATF1P18846 271 aa12.57□□□□□ -0.4
PTCHD3-201ENST00000438700 MAGEB1P43366 347 aa12.57□□□□□ -0.4
PTCHD3-201ENST00000438700 PITPNBP48739 271 aa12.57□□□□□ -0.4
PTCHD3-201ENST00000438700 CTXN1P60606 82 aa12.57□□□□□ -0.4
PTCHD3-201ENST00000438700 RPS11P62280 158 aaKnown RBP eCLIP12.57□□□□□ -0.4
PTCHD3-201ENST00000438700 BTG1P62324 171 aa12.57□□□□□ -0.4
PTCHD3-201ENST00000438700 CAMK2DQ13557 499 aa12.57□□□□□ -0.4
PTCHD3-201ENST00000438700 ST3GAL2Q16842 350 aa12.57□□□□□ -0.4
PTCHD3-201ENST00000438700 ALG10Q5BKT4 473 aa12.57□□□□□ -0.4
PTCHD3-201ENST00000438700 ZNF385CQ66K41 422 aaPredicted RBP12.57□□□□□ -0.4
PTCHD3-201ENST00000438700 GPR139Q6DWJ6 353 aa12.57□□□□□ -0.4
PTCHD3-201ENST00000438700 JAZF1Q86VZ6 243 aa12.57□□□□□ -0.4
PTCHD3-201ENST00000438700 ZNF440Q8IYI8 595 aa12.57□□□□□ -0.4
PTCHD3-201ENST00000438700 SYS1Q8N2H4 156 aa12.57□□□□□ -0.4
PTCHD3-201ENST00000438700 OR1N1Q8NGS0 311 aa12.57□□□□□ -0.4
PTCHD3-201ENST00000438700 KCTD12Q96CX2 325 aaKnown RBP12.57□□□□□ -0.4
PTCHD3-201ENST00000438700 LRFN5Q96NI6 719 aa12.57□□□□□ -0.4
PTCHD3-201ENST00000438700 UBL7Q96S82 380 aaPredicted RBP12.57□□□□□ -0.4
PTCHD3-201ENST00000438700 ALG12Q9BV10 488 aa12.57□□□□□ -0.4
PTCHD3-201ENST00000438700 MMP25Q9NPA2 562 aa12.57□□□□□ -0.4
PTCHD3-201ENST00000438700 AK6Q9Y3D8 172 aaKnown RBP12.57□□□□□ -0.4
PTCHD3-201ENST00000438700 R4GN57 208 aa12.57□□□□□ -0.4
PTCHD3-201ENST00000438700 LNP1A1A4G5 178 aa12.57□□□□□ -0.4
PTCHD3-201ENST00000438700 C7orf66A4D0T2 115 aa12.57□□□□□ -0.4
PTCHD3-201ENST00000438700 OGG1O15527 345 aa12.57□□□□□ -0.4
PTCHD3-201ENST00000438700 HCRTR2O43614 444 aa12.57□□□□□ -0.4
PTCHD3-201ENST00000438700 FZD7O75084 574 aa12.57□□□□□ -0.4
PTCHD3-201ENST00000438700 LDOC1O95751 146 aaPredicted RBP12.57□□□□□ -0.4
PTCHD3-201ENST00000438700 DHFRP00374 187 aa12.57□□□□□ -0.4
PTCHD3-201ENST00000438700 HEXBP07686 556 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms