RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 TSPAN19P0C672 248 aa21.55■■□□□ 1.04
RAPGEF1-206ENST00000438647 TCN1P20061 433 aaPredicted RBP21.55■■□□□ 1.04
RAPGEF1-206ENST00000438647 ARR3P36575 388 aa21.55■■□□□ 1.04
RAPGEF1-206ENST00000438647 AQP2P41181 271 aa21.55■■□□□ 1.04
RAPGEF1-206ENST00000438647 FABP6P51161 128 aa21.55■■□□□ 1.04
RAPGEF1-206ENST00000438647 FXNQ16595 210 aa21.55■■□□□ 1.04
RAPGEF1-206ENST00000438647 ZNF730Q6ZMV8 503 aa21.55■■□□□ 1.04
RAPGEF1-206ENST00000438647 WDFY1Q8IWB7 410 aa21.55■■□□□ 1.04
RAPGEF1-206ENST00000438647 NRMQ8IXM6 262 aa21.55■■□□□ 1.04
RAPGEF1-206ENST00000438647 CDK20Q8IZL9 346 aa21.55■■□□□ 1.04
RAPGEF1-206ENST00000438647 MUC15Q8N387 334 aa21.55■■□□□ 1.04
RAPGEF1-206ENST00000438647 CCDC197Q8NCU1 140 aa21.55■■□□□ 1.04
RAPGEF1-206ENST00000438647 NANOS1Q8WY41 292 aaKnown RBP21.55■■□□□ 1.04
RAPGEF1-206ENST00000438647 CDRT15Q96T59 188 aa21.55■■□□□ 1.04
RAPGEF1-206ENST00000438647 CBLN4Q9NTU7 201 aa21.55■■□□□ 1.04
RAPGEF1-206ENST00000438647 MOKQ9UQ07 419 aa21.55■■□□□ 1.04
RAPGEF1-206ENST00000438647 HIF3AQ9Y2N7 669 aa21.55■■□□□ 1.04
RAPGEF1-206ENST00000438647 FLNAP21333 2647 aaKnown RBP21.54■■□□□ 1.04
RAPGEF1-206ENST00000438647 NPIPB13A6NJU9 1138 aa21.54■■□□□ 1.04
RAPGEF1-206ENST00000438647 NPIPB4C9JG80 1138 aa21.54■■□□□ 1.04
RAPGEF1-206ENST00000438647 ATP6V1G2-DDX39BF2Z307 99 aa21.54■■□□□ 1.04
RAPGEF1-206ENST00000438647 PRSS23O95084 383 aa21.54■■□□□ 1.04
RAPGEF1-206ENST00000438647 F13BP05160 661 aa21.54■■□□□ 1.04
RAPGEF1-206ENST00000438647 PGA4P0DJD7 388 aa21.54■■□□□ 1.04
RAPGEF1-206ENST00000438647 PGA3P0DJD8 388 aa21.54■■□□□ 1.04
RAPGEF1-206ENST00000438647 SAGP10523 405 aaPredicted RBP21.54■■□□□ 1.04
RAPGEF1-206ENST00000438647 CLRN1P58418 232 aa21.54■■□□□ 1.04
RAPGEF1-206ENST00000438647 ETFDHQ16134 617 aa21.54■■□□□ 1.04
RAPGEF1-206ENST00000438647 ANKDD1AQ495B1 522 aa21.54■■□□□ 1.04
RAPGEF1-206ENST00000438647 B3GLCTQ6Y288 498 aa21.54■■□□□ 1.04
RAPGEF1-206ENST00000438647 RRM2BQ7LG56 351 aa21.54■■□□□ 1.04
RAPGEF1-206ENST00000438647 FAM156AQ8NDB6 213 aa21.54■■□□□ 1.04
RAPGEF1-206ENST00000438647 Q96MF0 132 aa21.54■■□□□ 1.04
RAPGEF1-206ENST00000438647 DLL4Q9NR61 685 aa21.54■■□□□ 1.04
RAPGEF1-206ENST00000438647 CD8AP01732 235 aa21.53■■□□□ 1.04
RAPGEF1-206ENST00000438647 CECR9P0C854 216 aa21.53■■□□□ 1.04
RAPGEF1-206ENST00000438647 B4GALT1P15291 398 aa21.53■■□□□ 1.04
RAPGEF1-206ENST00000438647 RHCEP18577 417 aa21.53■■□□□ 1.04
RAPGEF1-206ENST00000438647 CDKN1AP38936 164 aa21.53■■□□□ 1.04
RAPGEF1-206ENST00000438647 NAAAQ02083 359 aa21.53■■□□□ 1.04
RAPGEF1-206ENST00000438647 PRKCDQ05655 676 aa21.53■■□□□ 1.04
RAPGEF1-206ENST00000438647 ALG10Q5BKT4 473 aa21.53■■□□□ 1.04
RAPGEF1-206ENST00000438647 MBOAT2Q6ZWT7 520 aa21.53■■□□□ 1.04
RAPGEF1-206ENST00000438647 PIWIL3Q7Z3Z3 882 aaKnown RBP21.53■■□□□ 1.04
RAPGEF1-206ENST00000438647 DEFB107AQ8IZN7 70 aa21.53■■□□□ 1.04
RAPGEF1-206ENST00000438647 FITM2Q8N6M3 262 aa21.53■■□□□ 1.04
RAPGEF1-206ENST00000438647 RBM15BQ8NDT2 890 aaKnown RBP21.53■■□□□ 1.04
RAPGEF1-206ENST00000438647 BDH2Q9BUT1 245 aa21.53■■□□□ 1.04
RAPGEF1-206ENST00000438647 NMNAT1Q9HAN9 279 aaPredicted RBP21.53■■□□□ 1.04
RAPGEF1-206ENST00000438647 CD300AQ9UGN4 299 aa21.53■■□□□ 1.04
RAPGEF1-206ENST00000438647 A0A087WUU8 490 aa21.52■■□□□ 1.04
RAPGEF1-206ENST00000438647 BMP4P12644 408 aa21.52■■□□□ 1.04
RAPGEF1-206ENST00000438647 NR2C1P13056 603 aa21.52■■□□□ 1.04
RAPGEF1-206ENST00000438647 ITGA2P17301 1181 aa21.52■■□□□ 1.04
RAPGEF1-206ENST00000438647 APOBEC3AP31941 199 aaPredicted RBP21.52■■□□□ 1.04
RAPGEF1-206ENST00000438647 SLC9A3P48764 834 aa21.52■■□□□ 1.04
RAPGEF1-206ENST00000438647 IDH3GP51553 393 aaPredicted RBP21.52■■□□□ 1.04
RAPGEF1-206ENST00000438647 TAF11Q15544 211 aa21.52■■□□□ 1.04
RAPGEF1-206ENST00000438647 MDP1Q86V88 176 aa21.52■■□□□ 1.04
RAPGEF1-206ENST00000438647 IL17RDQ8NFM7 739 aa21.52■■□□□ 1.04
RAPGEF1-206ENST00000438647 MOSPD2Q8NHP6 518 aa21.52■■□□□ 1.04
RAPGEF1-206ENST00000438647 ASB10Q8WXI3 467 aa21.52■■□□□ 1.04
RAPGEF1-206ENST00000438647 C18orf12Q96KH6 178 aa21.52■■□□□ 1.04
RAPGEF1-206ENST00000438647 NSMCE2Q96MF7 247 aa21.52■■□□□ 1.04
RAPGEF1-206ENST00000438647 DENND2DQ9H6A0 471 aaPredicted RBP21.52■■□□□ 1.04
RAPGEF1-206ENST00000438647 NDUFAF4Q9P032 175 aa21.52■■□□□ 1.04
RAPGEF1-206ENST00000438647 ACANP16112 2415 aa21.51■■□□□ 1.03
RAPGEF1-206ENST00000438647 A0A1W2PRQ8 180 aa21.51■■□□□ 1.03
RAPGEF1-206ENST00000438647 EFCAB9A8MZ26 197 aa21.51■■□□□ 1.03
RAPGEF1-206ENST00000438647 DHHO43323 396 aa21.51■■□□□ 1.03
RAPGEF1-206ENST00000438647 H1F0P07305 194 aaKnown RBP21.51■■□□□ 1.03
RAPGEF1-206ENST00000438647 CD79AP11912 226 aa21.51■■□□□ 1.03
RAPGEF1-206ENST00000438647 ACADSP16219 412 aa21.51■■□□□ 1.03
RAPGEF1-206ENST00000438647 LSM11P83369 360 aaKnown RBP eCLIP21.51■■□□□ 1.03
RAPGEF1-206ENST00000438647 NPRL3Q12980 569 aa21.51■■□□□ 1.03
RAPGEF1-206ENST00000438647 DGCR6Q14129 220 aa21.51■■□□□ 1.03
RAPGEF1-206ENST00000438647 LAPTM4AQ15012 233 aa21.51■■□□□ 1.03
RAPGEF1-206ENST00000438647 GSG1Q2KHT4 349 aa21.51■■□□□ 1.03
RAPGEF1-206ENST00000438647 LRFN4Q6PJG9 635 aa21.51■■□□□ 1.03
RAPGEF1-206ENST00000438647 OAFQ86UD1 273 aa21.51■■□□□ 1.03
RAPGEF1-206ENST00000438647 NOXO1Q8NFA2 376 aa21.51■■□□□ 1.03
RAPGEF1-206ENST00000438647 OR4F15Q8NGB8 312 aa21.51■■□□□ 1.03
RAPGEF1-206ENST00000438647 PYURFQ96I23 114 aa21.51■■□□□ 1.03
RAPGEF1-206ENST00000438647 TXNIPQ9H3M7 391 aa21.51■■□□□ 1.03
RAPGEF1-206ENST00000438647 BARX1Q9HBU1 254 aaPredicted RBP21.51■■□□□ 1.03
RAPGEF1-206ENST00000438647 B3GNT2Q9NY97 397 aa21.51■■□□□ 1.03
RAPGEF1-206ENST00000438647 TMEM5Q9Y2B1 443 aa21.51■■□□□ 1.03
RAPGEF1-206ENST00000438647 MTORP42345 2549 aa21.5■■□□□ 1.03
RAPGEF1-206ENST00000438647 UBL3O95164 117 aa21.5■■□□□ 1.03
RAPGEF1-206ENST00000438647 FARS2O95363 451 aaKnown RBP21.5■■□□□ 1.03
RAPGEF1-206ENST00000438647 HLA-HP01893 362 aa21.5■■□□□ 1.03
RAPGEF1-206ENST00000438647 QDPRP09417 244 aa21.5■■□□□ 1.03
RAPGEF1-206ENST00000438647 MAKP20794 623 aa21.5■■□□□ 1.03
RAPGEF1-206ENST00000438647 FUT4P22083 530 aa21.5■■□□□ 1.03
RAPGEF1-206ENST00000438647 ZNF84P51523 738 aa21.5■■□□□ 1.03
RAPGEF1-206ENST00000438647 CHRNB3Q05901 458 aa21.5■■□□□ 1.03
RAPGEF1-206ENST00000438647 HIST3H3Q16695 136 aa21.5■■□□□ 1.03
RAPGEF1-206ENST00000438647 C11orf71Q6IPW1 123 aa21.5■■□□□ 1.03
RAPGEF1-206ENST00000438647 TSEN54Q7Z6J9 526 aaKnown RBP21.5■■□□□ 1.03
RAPGEF1-206ENST00000438647 NSL1Q96IY1 281 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms