RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 C1orf147Q96MC9 270 aaPredicted RBP12.59□□□□□ -0.39
HDAC8-213ENST00000436675 SH3GL3Q99963 347 aa12.59□□□□□ -0.39
HDAC8-213ENST00000436675 C20orf27Q9GZN8 174 aa12.59□□□□□ -0.39
HDAC8-213ENST00000436675 CDH20Q9HBT6 801 aa12.59□□□□□ -0.39
HDAC8-213ENST00000436675 KLHL14Q9P2G3 628 aa12.59□□□□□ -0.39
HDAC8-213ENST00000436675 PRDM4Q9UKN5 801 aa12.59□□□□□ -0.39
HDAC8-213ENST00000436675 A0A087WUJ7 227 aa12.58□□□□□ -0.4
HDAC8-213ENST00000436675 LOC102725191A0A1B0GVB3 256 aa12.58□□□□□ -0.4
HDAC8-213ENST00000436675 A0A1B0GWA3 101 aa12.58□□□□□ -0.4
HDAC8-213ENST00000436675 LRRN3E7EW58 273 aa12.58□□□□□ -0.4
HDAC8-213ENST00000436675 RFXANKO14593 260 aa12.58□□□□□ -0.4
HDAC8-213ENST00000436675 GATA3P23771 443 aa12.58□□□□□ -0.4
HDAC8-213ENST00000436675 CSNK1A1P48729 337 aa12.58□□□□□ -0.4
HDAC8-213ENST00000436675 ABCE1P61221 599 aaKnown RBP12.58□□□□□ -0.4
HDAC8-213ENST00000436675 PMS2P3Q13401 168 aa12.58□□□□□ -0.4
HDAC8-213ENST00000436675 GTDC1Q4AE62 458 aa12.58□□□□□ -0.4
HDAC8-213ENST00000436675 DOK3Q7L591 496 aa12.58□□□□□ -0.4
HDAC8-213ENST00000436675 ZNF627Q7L945 461 aa12.58□□□□□ -0.4
HDAC8-213ENST00000436675 NET1Q7Z628 596 aaPredicted RBP12.58□□□□□ -0.4
HDAC8-213ENST00000436675 RETREG3Q86VR2 466 aa12.58□□□□□ -0.4
HDAC8-213ENST00000436675 SNX32Q86XE0 403 aa12.58□□□□□ -0.4
HDAC8-213ENST00000436675 C10orf53Q8N6V4 93 aa12.58□□□□□ -0.4
HDAC8-213ENST00000436675 C11orf40Q8WZ69 217 aa12.58□□□□□ -0.4
HDAC8-213ENST00000436675 ZNF48Q96MX3 618 aaPredicted RBP12.58□□□□□ -0.4
HDAC8-213ENST00000436675 DENND2DQ9H6A0 471 aaPredicted RBP12.58□□□□□ -0.4
HDAC8-213ENST00000436675 RNF121Q9H920 327 aa12.58□□□□□ -0.4
HDAC8-213ENST00000436675 SAP30LQ9HAJ7 183 aa12.58□□□□□ -0.4
HDAC8-213ENST00000436675 IGLV3-9A0A075B6K5 115 aa12.57□□□□□ -0.4
HDAC8-213ENST00000436675 A0A0G2JPF8 293 aa12.57□□□□□ -0.4
HDAC8-213ENST00000436675 HNRNPCL2B2RXH8 293 aa12.57□□□□□ -0.4
HDAC8-213ENST00000436675 HNRNPCL3B7ZW38 293 aa12.57□□□□□ -0.4
HDAC8-213ENST00000436675 SPRY3O43610 288 aa12.57□□□□□ -0.4
HDAC8-213ENST00000436675 HNRNPCL1O60812 293 aaKnown RBP12.57□□□□□ -0.4
HDAC8-213ENST00000436675 FZD7O75084 574 aa12.57□□□□□ -0.4
HDAC8-213ENST00000436675 ANP32DO95626 131 aa12.57□□□□□ -0.4
HDAC8-213ENST00000436675 SERPINE1P05121 402 aa12.57□□□□□ -0.4
HDAC8-213ENST00000436675 HNRNPCL4P0DMR1 293 aa12.57□□□□□ -0.4
HDAC8-213ENST00000436675 OR8G3PP0DMU2 310 aa12.57□□□□□ -0.4
HDAC8-213ENST00000436675 ZNF250P15622 560 aa12.57□□□□□ -0.4
HDAC8-213ENST00000436675 MDKP21741 143 aaPredicted RBP12.57□□□□□ -0.4
HDAC8-213ENST00000436675 DRD4P21917 467 aa12.57□□□□□ -0.4
HDAC8-213ENST00000436675 OMGP23515 440 aa12.57□□□□□ -0.4
HDAC8-213ENST00000436675 AHCYP23526 432 aa12.57□□□□□ -0.4
HDAC8-213ENST00000436675 HTR2AP28223 471 aa12.57□□□□□ -0.4
HDAC8-213ENST00000436675 RBMXP38159 391 aaKnown RBP12.57□□□□□ -0.4
HDAC8-213ENST00000436675 RPL14P50914 215 aaKnown RBP12.57□□□□□ -0.4
HDAC8-213ENST00000436675 IL13RA1P78552 427 aa12.57□□□□□ -0.4
HDAC8-213ENST00000436675 ALG10BQ5I7T1 473 aa12.57□□□□□ -0.4
HDAC8-213ENST00000436675 LEG1Q6P5S2 330 aa12.57□□□□□ -0.4
HDAC8-213ENST00000436675 C6orf89Q6UWU4 347 aa12.57□□□□□ -0.4
HDAC8-213ENST00000436675 ADPRHL1Q8NDY3 354 aa12.57□□□□□ -0.4
HDAC8-213ENST00000436675 ZNF519Q8TB69 540 aa12.57□□□□□ -0.4
HDAC8-213ENST00000436675 ST7LQ8TDW4 575 aa12.57□□□□□ -0.4
HDAC8-213ENST00000436675 MOGAT1Q96PD6 335 aa12.57□□□□□ -0.4
HDAC8-213ENST00000436675 ZBTB18Q99592 522 aa12.57□□□□□ -0.4
HDAC8-213ENST00000436675 ASPNQ9BXN1 380 aa12.57□□□□□ -0.4
HDAC8-213ENST00000436675 MMP26Q9NRE1 261 aa12.57□□□□□ -0.4
HDAC8-213ENST00000436675 PNPOQ9NVS9 261 aa12.57□□□□□ -0.4
HDAC8-213ENST00000436675 AIG1Q9NVV5 245 aa12.57□□□□□ -0.4
HDAC8-213ENST00000436675 SLCO1C1Q9NYB5 712 aa12.57□□□□□ -0.4
HDAC8-213ENST00000436675 FBXL3Q9UKT7 428 aa12.57□□□□□ -0.4
HDAC8-213ENST00000436675 NUP50Q9UKX7 468 aa12.57□□□□□ -0.4
HDAC8-213ENST00000436675 IFT52Q9Y366 437 aa12.57□□□□□ -0.4
HDAC8-213ENST00000436675 RAP2CQ9Y3L5 183 aa12.57□□□□□ -0.4
HDAC8-213ENST00000436675 TANC2Q9HCD6 1990 aa12.56□□□□□ -0.4
HDAC8-213ENST00000436675 SLC22A23A1A5C7 686 aa12.56□□□□□ -0.4
HDAC8-213ENST00000436675 TMEM247A6NEH6 219 aa12.56□□□□□ -0.4
HDAC8-213ENST00000436675 C11orf98E9PRG8 122 aa12.56□□□□□ -0.4
HDAC8-213ENST00000436675 BGLAPP02818 100 aa12.56□□□□□ -0.4
HDAC8-213ENST00000436675 NUDT7P0C024 238 aa12.56□□□□□ -0.4
HDAC8-213ENST00000436675 PCGF2P35227 344 aa12.56□□□□□ -0.4
HDAC8-213ENST00000436675 ETV4P43268 484 aa12.56□□□□□ -0.4
HDAC8-213ENST00000436675 BIDP55957 195 aa12.56□□□□□ -0.4
HDAC8-213ENST00000436675 SRSF4Q08170 494 aaKnown RBP12.56□□□□□ -0.4
HDAC8-213ENST00000436675 MMEL1Q495T6 779 aa12.56□□□□□ -0.4
HDAC8-213ENST00000436675 KLF17Q5JT82 389 aaPredicted RBP12.56□□□□□ -0.4
HDAC8-213ENST00000436675 C5orf46Q6UWT4 87 aa12.56□□□□□ -0.4
HDAC8-213ENST00000436675 NHLRC1Q6VVB1 395 aa12.56□□□□□ -0.4
HDAC8-213ENST00000436675 WDR88Q6ZMY6 472 aa12.56□□□□□ -0.4
HDAC8-213ENST00000436675 COMTD1Q86VU5 262 aa12.56□□□□□ -0.4
HDAC8-213ENST00000436675 JAZF1Q86VZ6 243 aa12.56□□□□□ -0.4
HDAC8-213ENST00000436675 SLC22A24Q8N4F4 322 aa12.56□□□□□ -0.4
HDAC8-213ENST00000436675 GLB1L3Q8NCI6 653 aaPredicted RBP12.56□□□□□ -0.4
HDAC8-213ENST00000436675 DEFB108BQ8NET1 73 aa12.56□□□□□ -0.4
HDAC8-213ENST00000436675 MAL2Q969L2 176 aa12.56□□□□□ -0.4
HDAC8-213ENST00000436675 ELMOD3Q96FG2 381 aa12.56□□□□□ -0.4
HDAC8-213ENST00000436675 SLC41A3Q96GZ6 507 aa12.56□□□□□ -0.4
HDAC8-213ENST00000436675 SORT1Q99523 831 aa12.56□□□□□ -0.4
HDAC8-213ENST00000436675 RSPO3Q9BXY4 272 aaPredicted RBP12.56□□□□□ -0.4
HDAC8-213ENST00000436675 TPT1P8Q9HAU6 139 aa12.56□□□□□ -0.4
HDAC8-213ENST00000436675 NKIRAS2Q9NYR9 191 aa12.56□□□□□ -0.4
HDAC8-213ENST00000436675 LEF1Q9UJU2 399 aaPredicted RBP12.56□□□□□ -0.4
HDAC8-213ENST00000436675 SOX21Q9Y651 276 aaPredicted RBP12.56□□□□□ -0.4
HDAC8-213ENST00000436675 IGHV3OR16-10A0A075B7F0 116 aa12.55□□□□□ -0.4
HDAC8-213ENST00000436675 POM121CA8CG34 1229 aa12.55□□□□□ -0.4
HDAC8-213ENST00000436675 SLC1A6P48664 564 aa12.55□□□□□ -0.4
HDAC8-213ENST00000436675 ATP4BP51164 291 aa12.55□□□□□ -0.4
HDAC8-213ENST00000436675 ZNF81P51508 661 aa12.55□□□□□ -0.4
HDAC8-213ENST00000436675 UCP2P55851 309 aa12.55□□□□□ -0.4
HDAC8-213ENST00000436675 PUDPQ08623 228 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms