RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 OR6C68A6NDL8 312 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 A6NIZ1 184 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 ZNF814B7Z6K7 855 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 XKRYO14609 159 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 TFECO14948 347 aaPredicted RBP10.06□□□□□ -0.8
LINC00539-203ENST00000434601 FADS2O95864 444 aaKnown RBP10.06□□□□□ -0.8
LINC00539-203ENST00000434601 RENP00797 406 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 STSP08842 583 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 CLUP10909 449 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 HLA-DOBP13765 273 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 ZNF24P17028 368 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 SLC2A5P22732 501 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 ACVR1BP36896 505 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 CDKN2AP42771 156 aaKnown RBP10.06□□□□□ -0.8
LINC00539-203ENST00000434601 ALDH3B2P48448 385 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 STARP49675 285 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 LHX2P50458 406 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 SLC25A1P53007 311 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 RAC3P60763 192 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 RAP1BP61224 184 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 RAP1AP62834 184 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 H3F3AP84243 136 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 HSF1Q00613 529 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 MVKQ03426 396 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 LGALS3BPQ08380 585 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 ST3GAL4Q11206 333 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 RAB40BQ12829 278 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 MELKQ14680 651 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 SLC10A1Q14973 349 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 NEDD8Q15843 81 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 KLHL12Q53G59 568 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 KLHL22Q53GT1 634 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 PDSS1Q5T2R2 415 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 ARMC4Q5T2S8 1044 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 LCN1P1Q5VSP4 162 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 GTF2IRD2BQ6EKJ0 949 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 MEPCEQ7L2J0 689 aaKnown RBP10.06□□□□□ -0.8
LINC00539-203ENST00000434601 GTF2IRD2Q86UP8 949 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 UBQLNLQ8IYU4 475 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 KDM8Q8N371 416 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 OR52I1Q8NGK6 324 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 OR9Q1Q8NGQ5 310 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 OR10D3Q8NH80 312 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 ZPLD1Q8TCW7 415 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 ASB10Q8WXI3 467 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 PTP4A1Q93096 173 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 KISS1RQ969F8 398 aaPredicted RBP10.06□□□□□ -0.8
LINC00539-203ENST00000434601 LGALS12Q96DT0 336 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 SNX18Q96RF0 628 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 DDOQ99489 341 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 SRXN1Q9BYN0 137 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 NMNAT2Q9BZQ4 307 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 OR51V1Q9H2C8 321 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 WARS2Q9UGM6 360 aaKnown RBP10.06□□□□□ -0.8
LINC00539-203ENST00000434601 OSGIN2Q9Y236 505 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 RASD1Q9Y272 281 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 PCDHGB1Q9Y5G3 927 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 NOX1Q9Y5S8 564 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 LIPGQ9Y5X9 500 aa10.06□□□□□ -0.8
LINC00539-203ENST00000434601 LOC102725191A0A1B0GVB3 256 aa10.05□□□□□ -0.8
LINC00539-203ENST00000434601 DPPA5A6NC42 116 aa10.05□□□□□ -0.8
LINC00539-203ENST00000434601 H0YC42 278 aa10.05□□□□□ -0.8
LINC00539-203ENST00000434601 H7C1C5 153 aa10.05□□□□□ -0.8
LINC00539-203ENST00000434601 ARHGEF9O43307 516 aa10.05□□□□□ -0.8
LINC00539-203ENST00000434601 TRAF3IP2O43734 574 aaPredicted RBP10.05□□□□□ -0.8
LINC00539-203ENST00000434601 RAMP1O60894 148 aa10.05□□□□□ -0.8
LINC00539-203ENST00000434601 RAB36O95755 333 aa10.05□□□□□ -0.8
LINC00539-203ENST00000434601 BCL10O95999 233 aa10.05□□□□□ -0.8
LINC00539-203ENST00000434601 ACTL6AO96019 429 aa10.05□□□□□ -0.8
LINC00539-203ENST00000434601 GYPBP06028 91 aa10.05□□□□□ -0.8
LINC00539-203ENST00000434601 FREM3P0C091 2139 aa10.05□□□□□ -0.8
LINC00539-203ENST00000434601 IFNGR1P15260 489 aa10.05□□□□□ -0.8
LINC00539-203ENST00000434601 ZNF708P17019 499 aa10.05□□□□□ -0.8
LINC00539-203ENST00000434601 JUNBP17275 347 aaPredicted RBP10.05□□□□□ -0.8
LINC00539-203ENST00000434601 SPI1P17947 270 aa10.05□□□□□ -0.8
LINC00539-203ENST00000434601 KLK2P20151 261 aa10.05□□□□□ -0.8
LINC00539-203ENST00000434601 PCMT1P22061 227 aa10.05□□□□□ -0.8
LINC00539-203ENST00000434601 ENPP1P22413 925 aa10.05□□□□□ -0.8
LINC00539-203ENST00000434601 C21orf33P30042 268 aaPredicted RBP10.05□□□□□ -0.8
LINC00539-203ENST00000434601 EIF1AXP47813 144 aaKnown RBP10.05□□□□□ -0.8
LINC00539-203ENST00000434601 AGFG1P52594 562 aaKnown RBP10.05□□□□□ -0.8
LINC00539-203ENST00000434601 SUCLG1P53597 346 aaKnown RBP10.05□□□□□ -0.8
LINC00539-203ENST00000434601 SLC16A1P53985 500 aa10.05□□□□□ -0.8
LINC00539-203ENST00000434601 CLDN18P56856 261 aa10.05□□□□□ -0.8
LINC00539-203ENST00000434601 RPS7P62081 194 aaKnown RBP10.05□□□□□ -0.8
LINC00539-203ENST00000434601 LCN6P62502 163 aa10.05□□□□□ -0.8
LINC00539-203ENST00000434601 POU4F3Q15319 338 aa10.05□□□□□ -0.8
LINC00539-203ENST00000434601 TBCEQ15813 527 aaPredicted RBP10.05□□□□□ -0.8
LINC00539-203ENST00000434601 INAQ16352 499 aa10.05□□□□□ -0.8
LINC00539-203ENST00000434601 RNFT1Q5M7Z0 435 aa10.05□□□□□ -0.8
LINC00539-203ENST00000434601 SLC35D3Q5M8T2 416 aa10.05□□□□□ -0.8
LINC00539-203ENST00000434601 XAF1Q6GPH4 301 aa10.05□□□□□ -0.8
LINC00539-203ENST00000434601 SLC35D2Q76EJ3 337 aa10.05□□□□□ -0.8
LINC00539-203ENST00000434601 HDDC2Q7Z4H3 204 aa10.05□□□□□ -0.8
LINC00539-203ENST00000434601 GPAT4Q86UL3 456 aa10.05□□□□□ -0.8
LINC00539-203ENST00000434601 GHDCQ8N2G8 530 aa10.05□□□□□ -0.8
LINC00539-203ENST00000434601 MEIOBQ8N635 442 aa10.05□□□□□ -0.8
LINC00539-203ENST00000434601 NEIL3Q8TAT5 605 aa10.05□□□□□ -0.8
LINC00539-203ENST00000434601 ABTB1Q969K4 478 aaPredicted RBP10.05□□□□□ -0.8
LINC00539-203ENST00000434601 TMEM80Q96HE8 168 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms