RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 GTF3C1Q12789 2109 aa2.21□□□□□ -2.06
HMGB1P27-201ENST00000431429 CASP8AP2Q9UKL3 1982 aa2.21□□□□□ -2.06
HMGB1P27-201ENST00000431429 KIF13BQ9NQT8 1826 aa2.21□□□□□ -2.06
HMGB1P27-201ENST00000431429 ARFGEF1Q9Y6D6 1849 aa2.21□□□□□ -2.06
HMGB1P27-201ENST00000431429 MEGF6O75095 1541 aa2.21□□□□□ -2.06
HMGB1P27-201ENST00000431429 SZT2Q5T011 3432 aa2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 IGLV3-22A0A075B6J6 115 aa2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 A0A1B0GVY2 172 aa2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 CCDC182A6NF36 153 aa2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 FAM47DPA6NHR8 397 aa2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 E9PBE3 544 aa2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 GOLGA8SH3BPF8 625 aa2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 DNALI1O14645 258 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 TNFSF11O14788 317 aa2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 MBTPS2O43462 519 aa2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 ERLIN1O75477 346 aa2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 OXSR1O95747 527 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 MMP1P03956 469 aa2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 PABPC4LP0CB38 370 aaKnown RBP2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 TBPP20226 339 aa2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 CXCR2P25025 360 aa2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 SSR1P43307 286 aaKnown RBP2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 OR3A4PP47883 348 aa2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 SLC26A2P50443 739 aa2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 DLX1P56177 255 aa2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 IRX3P78415 501 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 GBE1Q04446 702 aa2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 PLD1Q13393 1074 aa2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 CUL2Q13617 745 aa2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 RNF212Q495C1 297 aa2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 ARMC12Q5T9G4 340 aa2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 C1orf94Q6P1W5 598 aa2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 ZNF530Q6P9A1 599 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 SCARA5Q6ZMJ2 495 aa2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 NANOGNBQ7Z5D8 188 aa2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 OR2AP1Q8NGE2 309 aa2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 NEIL3Q8TAT5 605 aa2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 FRAT1Q92837 279 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 FGF11Q92914 225 aa2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 CMTM7Q96FZ5 175 aa2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 PLEKHA8Q96JA3 519 aa2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 MBOAT4Q96T53 435 aa2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 P2RY13Q9BPV8 354 aa2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 NICN1Q9BSH3 213 aa2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 NUP58Q9BVL2 599 aa2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 RACGAP1Q9H0H5 632 aa2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 DEFB127Q9H1M4 99 aa2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 OR51J1Q9H342 316 aa2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 GIN1Q9NXP7 522 aa2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 SLC2A8Q9NY64 477 aa2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 CLCF1Q9UBD9 225 aa2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 KCNIP3Q9Y2W7 256 aa2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 C5P01031 1676 aa2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 USP54Q70EL1 1684 aa2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 ADAMTS7Q9UKP4 1686 aa2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 NFAT5O94916 1531 aa2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 N4BP2Q86UW6 1770 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 FLT4P35916 1363 aa2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 COL6A3P12111 3177 aa2.2□□□□□ -2.06
HMGB1P27-201ENST00000431429 A0A0G2JLM5 398 aa2.19□□□□□ -2.06
HMGB1P27-201ENST00000431429 CTAGE15A4D2H0 777 aa2.19□□□□□ -2.06
HMGB1P27-201ENST00000431429 A6NIZ1 184 aa2.19□□□□□ -2.06
HMGB1P27-201ENST00000431429 ABCD4O14678 606 aa2.19□□□□□ -2.06
HMGB1P27-201ENST00000431429 CTAG2O75638 210 aa2.19□□□□□ -2.06
HMGB1P27-201ENST00000431429 IGHV2-5P01817 119 aa2.19□□□□□ -2.06
HMGB1P27-201ENST00000431429 KRT6AP02538 564 aa2.19□□□□□ -2.06
HMGB1P27-201ENST00000431429 TPM2P07951 284 aa2.19□□□□□ -2.06
HMGB1P27-201ENST00000431429 MCF2P10911 925 aa2.19□□□□□ -2.06
HMGB1P27-201ENST00000431429 CASP14P31944 242 aa2.19□□□□□ -2.06
HMGB1P27-201ENST00000431429 TNNT2P45379 298 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P27-201ENST00000431429 RGRP47804 291 aa2.19□□□□□ -2.06
HMGB1P27-201ENST00000431429 NPBWR2P48146 333 aa2.19□□□□□ -2.06
HMGB1P27-201ENST00000431429 RAP1BP61224 184 aa2.19□□□□□ -2.06
HMGB1P27-201ENST00000431429 TLE4Q04727 773 aa2.19□□□□□ -2.06
HMGB1P27-201ENST00000431429 ENPEPQ07075 957 aa2.19□□□□□ -2.06
HMGB1P27-201ENST00000431429 MRPL28Q13084 256 aaKnown RBP2.19□□□□□ -2.06
HMGB1P27-201ENST00000431429 KYAT1Q16773 422 aa2.19□□□□□ -2.06
HMGB1P27-201ENST00000431429 KRTAP27-1Q3LI81 207 aa2.19□□□□□ -2.06
HMGB1P27-201ENST00000431429 TMEM31Q5JXX7 168 aa2.19□□□□□ -2.06
HMGB1P27-201ENST00000431429 SAMD4BQ5PRF9 694 aaKnown RBP2.19□□□□□ -2.06
HMGB1P27-201ENST00000431429 LRRC66Q68CR7 880 aa2.19□□□□□ -2.06
HMGB1P27-201ENST00000431429 CTRB2Q6GPI1 263 aa2.19□□□□□ -2.06
HMGB1P27-201ENST00000431429 RNASEKQ6P5S7 137 aaKnown RBP2.19□□□□□ -2.06
HMGB1P27-201ENST00000431429 TMEM107Q6UX40 140 aa2.19□□□□□ -2.06
HMGB1P27-201ENST00000431429 HSDL2Q6YN16 418 aa2.19□□□□□ -2.06
HMGB1P27-201ENST00000431429 CTAGE6Q86UF2 777 aa2.19□□□□□ -2.06
HMGB1P27-201ENST00000431429 CCDC65Q8IXS2 484 aa2.19□□□□□ -2.06
HMGB1P27-201ENST00000431429 GTPBP8Q8N3Z3 284 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P27-201ENST00000431429 LINC01006Q8NI28 216 aa2.19□□□□□ -2.06
HMGB1P27-201ENST00000431429 ACOT11Q8WXI4 607 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P27-201ENST00000431429 ELMO1Q92556 727 aa2.19□□□□□ -2.06
HMGB1P27-201ENST00000431429 C16orf74Q96GX8 76 aa2.19□□□□□ -2.06
HMGB1P27-201ENST00000431429 SLC35E1Q96K37 410 aa2.19□□□□□ -2.06
HMGB1P27-201ENST00000431429 PLIN2Q99541 437 aa2.19□□□□□ -2.06
HMGB1P27-201ENST00000431429 CDX2Q99626 313 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P27-201ENST00000431429 EBF4Q9BQW3 602 aa2.19□□□□□ -2.06
HMGB1P27-201ENST00000431429 RIOK2Q9BVS4 552 aaKnown RBP2.19□□□□□ -2.06
HMGB1P27-201ENST00000431429 MFFQ9GZY8 342 aa2.19□□□□□ -2.06
HMGB1P27-201ENST00000431429 HOXC10Q9NYD6 342 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms