RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 CDK20Q8IZL9 346 aa7.98□□□□□ -1.13
SMC1A-203ENST00000428014 CCDC197Q8NCU1 140 aa7.98□□□□□ -1.13
SMC1A-203ENST00000428014 VANGL1Q8TAA9 524 aaPredicted RBP7.98□□□□□ -1.13
SMC1A-203ENST00000428014 SMAP2Q8WU79 429 aaPredicted RBP7.98□□□□□ -1.13
SMC1A-203ENST00000428014 AKAP1Q92667 903 aaKnown RBP eCLIP7.98□□□□□ -1.13
SMC1A-203ENST00000428014 ZNF566Q969W8 418 aa7.98□□□□□ -1.13
SMC1A-203ENST00000428014 ZNF775Q96BV0 537 aaPredicted RBP7.98□□□□□ -1.13
SMC1A-203ENST00000428014 BPIFA2Q96DR5 249 aa7.98□□□□□ -1.13
SMC1A-203ENST00000428014 ALKBH3Q96Q83 286 aaPredicted RBP7.98□□□□□ -1.13
SMC1A-203ENST00000428014 SLC38A2Q96QD8 506 aa7.98□□□□□ -1.13
SMC1A-203ENST00000428014 ZNF347Q96SE7 839 aa7.98□□□□□ -1.13
SMC1A-203ENST00000428014 BDH2Q9BUT1 245 aa7.98□□□□□ -1.13
SMC1A-203ENST00000428014 TRAF4Q9BUZ4 470 aaPredicted RBP7.98□□□□□ -1.13
SMC1A-203ENST00000428014 FNDC11Q9BVV2 318 aa7.98□□□□□ -1.13
SMC1A-203ENST00000428014 TXNIPQ9H3M7 391 aa7.98□□□□□ -1.13
SMC1A-203ENST00000428014 LIME1Q9H400 295 aa7.98□□□□□ -1.13
SMC1A-203ENST00000428014 CRLF2Q9HC73 371 aa7.98□□□□□ -1.13
SMC1A-203ENST00000428014 CBLN4Q9NTU7 201 aa7.98□□□□□ -1.13
SMC1A-203ENST00000428014 B3GNT2Q9NY97 397 aa7.98□□□□□ -1.13
SMC1A-203ENST00000428014 CISD1Q9NZ45 108 aaKnown RBP7.98□□□□□ -1.13
SMC1A-203ENST00000428014 GLTPQ9NZD2 209 aa7.98□□□□□ -1.13
SMC1A-203ENST00000428014 ACTR3BQ9P1U1 418 aa7.98□□□□□ -1.13
SMC1A-203ENST00000428014 FAM32AQ9Y421 112 aaKnown RBP7.98□□□□□ -1.13
SMC1A-203ENST00000428014 SNX13Q9Y5W8 968 aa7.98□□□□□ -1.13
SMC1A-203ENST00000428014 C2CD3Q4AC94 2353 aa7.97□□□□□ -1.13
SMC1A-203ENST00000428014 A6NIZ1 184 aa7.97□□□□□ -1.13
SMC1A-203ENST00000428014 FFAR1O14842 300 aa7.97□□□□□ -1.13
SMC1A-203ENST00000428014 ICMTO60725 284 aa7.97□□□□□ -1.13
SMC1A-203ENST00000428014 UBL3O95164 117 aa7.97□□□□□ -1.13
SMC1A-203ENST00000428014 FARS2O95363 451 aaKnown RBP7.97□□□□□ -1.13
SMC1A-203ENST00000428014 SERPINA1P01009 418 aa7.97□□□□□ -1.13
SMC1A-203ENST00000428014 PTHP01270 115 aa7.97□□□□□ -1.13
SMC1A-203ENST00000428014 APOBEC3AP31941 199 aaPredicted RBP7.97□□□□□ -1.13
SMC1A-203ENST00000428014 TTKP33981 857 aa7.97□□□□□ -1.13
SMC1A-203ENST00000428014 MAGEA2P43356 314 aa7.97□□□□□ -1.13
SMC1A-203ENST00000428014 UGT2B15P54855 530 aa7.97□□□□□ -1.13
SMC1A-203ENST00000428014 DSCR9P59020 149 aa7.97□□□□□ -1.13
SMC1A-203ENST00000428014 RAP1BP61224 184 aa7.97□□□□□ -1.13
SMC1A-203ENST00000428014 RAP1AP62834 184 aa7.97□□□□□ -1.13
SMC1A-203ENST00000428014 NKX6-1P78426 367 aaPredicted RBP7.97□□□□□ -1.13
SMC1A-203ENST00000428014 MRPS34P82930 218 aaKnown RBP7.97□□□□□ -1.13
SMC1A-203ENST00000428014 RPL18Q07020 188 aaKnown RBP7.97□□□□□ -1.13
SMC1A-203ENST00000428014 CEACAM16Q2WEN9 425 aa7.97□□□□□ -1.13
SMC1A-203ENST00000428014 PGGHGQ32M88 737 aa7.97□□□□□ -1.13
SMC1A-203ENST00000428014 THEM4Q5T1C6 240 aa7.97□□□□□ -1.13
SMC1A-203ENST00000428014 ARMC4Q5T2S8 1044 aa7.97□□□□□ -1.13
SMC1A-203ENST00000428014 GPR139Q6DWJ6 353 aa7.97□□□□□ -1.13
SMC1A-203ENST00000428014 C11orf71Q6IPW1 123 aa7.97□□□□□ -1.13
SMC1A-203ENST00000428014 DEF8Q6ZN54 512 aa7.97□□□□□ -1.13
SMC1A-203ENST00000428014 DNM1P46Q6ZS02 220 aa7.97□□□□□ -1.13
SMC1A-203ENST00000428014 FKBP9P1Q75LS8 142 aa7.97□□□□□ -1.13
SMC1A-203ENST00000428014 LINGO2Q7L985 606 aa7.97□□□□□ -1.13
SMC1A-203ENST00000428014 SYT9Q86SS6 491 aa7.97□□□□□ -1.13
SMC1A-203ENST00000428014 KRTAP1-3Q8IUG1 177 aa7.97□□□□□ -1.13
SMC1A-203ENST00000428014 NKAIN4Q8IVV8 208 aa7.97□□□□□ -1.13
SMC1A-203ENST00000428014 FITM2Q8N6M3 262 aa7.97□□□□□ -1.13
SMC1A-203ENST00000428014 TMEM255BQ8WV15 326 aa7.97□□□□□ -1.13
SMC1A-203ENST00000428014 IPCEF1Q8WWN9 437 aaPredicted RBP7.97□□□□□ -1.13
SMC1A-203ENST00000428014 FAM162AQ96A26 154 aa7.97□□□□□ -1.13
SMC1A-203ENST00000428014 NMD3Q96D46 503 aaKnown RBP7.97□□□□□ -1.13
SMC1A-203ENST00000428014 PYURFQ96I23 114 aa7.97□□□□□ -1.13
SMC1A-203ENST00000428014 TPD52L3Q96J77 140 aa7.97□□□□□ -1.13
SMC1A-203ENST00000428014 HSH2DQ96JZ2 352 aa7.97□□□□□ -1.13
SMC1A-203ENST00000428014 ZNF75AQ96N20 296 aa7.97□□□□□ -1.13
SMC1A-203ENST00000428014 SNX18Q96RF0 628 aa7.97□□□□□ -1.13
SMC1A-203ENST00000428014 FOXB1Q99853 325 aa7.97□□□□□ -1.13
SMC1A-203ENST00000428014 ULBP2Q9BZM5 246 aa7.97□□□□□ -1.13
SMC1A-203ENST00000428014 MAGIXQ9H6Y5 334 aa7.97□□□□□ -1.13
SMC1A-203ENST00000428014 NMNAT1Q9HAN9 279 aaPredicted RBP7.97□□□□□ -1.13
SMC1A-203ENST00000428014 MYOZ1Q9NP98 299 aaPredicted RBP7.97□□□□□ -1.13
SMC1A-203ENST00000428014 IL1RAPQ9NPH3 570 aa7.97□□□□□ -1.13
SMC1A-203ENST00000428014 INIPQ9NRY2 104 aa7.97□□□□□ -1.13
SMC1A-203ENST00000428014 NDUFAF4Q9P032 175 aa7.97□□□□□ -1.13
SMC1A-203ENST00000428014 A0A087WUU8 490 aa7.96□□□□□ -1.14
SMC1A-203ENST00000428014 SLC22A23A1A5C7 686 aa7.96□□□□□ -1.14
SMC1A-203ENST00000428014 DHHO43323 396 aa7.96□□□□□ -1.14
SMC1A-203ENST00000428014 RNF13O43567 381 aa7.96□□□□□ -1.14
SMC1A-203ENST00000428014 SNAP29O95721 258 aa7.96□□□□□ -1.14
SMC1A-203ENST00000428014 ZNF682O95780 498 aa7.96□□□□□ -1.14
SMC1A-203ENST00000428014 IGHV3-9P01782 118 aa7.96□□□□□ -1.14
SMC1A-203ENST00000428014 H1F0P07305 194 aaKnown RBP7.96□□□□□ -1.14
SMC1A-203ENST00000428014 CSF3P09919 207 aa7.96□□□□□ -1.14
SMC1A-203ENST00000428014 OR8G3PP0DMU2 310 aa7.96□□□□□ -1.14
SMC1A-203ENST00000428014 HLA-DOBP13765 273 aa7.96□□□□□ -1.14
SMC1A-203ENST00000428014 CD99P14209 185 aa7.96□□□□□ -1.14
SMC1A-203ENST00000428014 IFNGR1P15260 489 aa7.96□□□□□ -1.14
SMC1A-203ENST00000428014 TUBG1P23258 451 aa7.96□□□□□ -1.14
SMC1A-203ENST00000428014 AHCYP23526 432 aa7.96□□□□□ -1.14
SMC1A-203ENST00000428014 IFNGR2P38484 337 aa7.96□□□□□ -1.14
SMC1A-203ENST00000428014 OR1E2P47887 323 aa7.96□□□□□ -1.14
SMC1A-203ENST00000428014 PTDSS1P48651 473 aaKnown RBP7.96□□□□□ -1.14
SMC1A-203ENST00000428014 PTH2RP49190 550 aa7.96□□□□□ -1.14
SMC1A-203ENST00000428014 CDH11P55287 796 aa7.96□□□□□ -1.14
SMC1A-203ENST00000428014 FOXG1P55316 489 aaPredicted RBP7.96□□□□□ -1.14
SMC1A-203ENST00000428014 RPL27P61353 136 aaKnown RBP7.96□□□□□ -1.14
SMC1A-203ENST00000428014 ARF1P84077 181 aaKnown RBP7.96□□□□□ -1.14
SMC1A-203ENST00000428014 CHRNB3Q05901 458 aa7.96□□□□□ -1.14
SMC1A-203ENST00000428014 TRIM25Q14258 630 aaKnown RBP7.96□□□□□ -1.14
SMC1A-203ENST00000428014 TSC22D1Q15714 1073 aa7.96□□□□□ -1.14
SMC1A-203ENST00000428014 LCN8Q6JVE9 175 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms