RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 MFN2O95140 757 aa12.8□□□□□ -0.36
ATG4B-209ENST00000425239 CLPTM1O96005 669 aa12.8□□□□□ -0.36
ATG4B-209ENST00000425239 TFP02787 698 aa12.8□□□□□ -0.36
ATG4B-209ENST00000425239 SAGP10523 405 aaPredicted RBP12.8□□□□□ -0.36
ATG4B-209ENST00000425239 NQO1P15559 274 aaKnown RBP12.8□□□□□ -0.36
ATG4B-209ENST00000425239 ZNF250P15622 560 aa12.8□□□□□ -0.36
ATG4B-209ENST00000425239 PCMT1P22061 227 aa12.8□□□□□ -0.36
ATG4B-209ENST00000425239 PMS2P3Q13401 168 aa12.8□□□□□ -0.36
ATG4B-209ENST00000425239 C12orf54Q6X4T0 127 aa12.8□□□□□ -0.36
ATG4B-209ENST00000425239 USP43Q70EL4 1123 aa12.8□□□□□ -0.36
ATG4B-209ENST00000425239 TSPYL5Q86VY4 417 aaPredicted RBP12.8□□□□□ -0.36
ATG4B-209ENST00000425239 SLC22A24Q8N4F4 322 aa12.8□□□□□ -0.36
ATG4B-209ENST00000425239 LRRC37BQ96QE4 947 aa12.8□□□□□ -0.36
ATG4B-209ENST00000425239 TSPAN32Q96QS1 320 aa12.8□□□□□ -0.36
ATG4B-209ENST00000425239 ULBP2Q9BZM5 246 aa12.8□□□□□ -0.36
ATG4B-209ENST00000425239 NARFLQ9H6Q4 476 aa12.8□□□□□ -0.36
ATG4B-209ENST00000425239 LPAR2Q9HBW0 351 aa12.8□□□□□ -0.36
ATG4B-209ENST00000425239 ZNF726A6NNF4 738 aa12.79□□□□□ -0.36
ATG4B-209ENST00000425239 C5orf58C9J3I9 102 aa12.79□□□□□ -0.36
ATG4B-209ENST00000425239 UBL3O95164 117 aa12.79□□□□□ -0.36
ATG4B-209ENST00000425239 HILS1P60008 231 aa12.79□□□□□ -0.36
ATG4B-209ENST00000425239 ZP4Q12836 540 aa12.79□□□□□ -0.36
ATG4B-209ENST00000425239 NPTX1Q15818 432 aa12.79□□□□□ -0.36
ATG4B-209ENST00000425239 HIST3H3Q16695 136 aa12.79□□□□□ -0.36
ATG4B-209ENST00000425239 DUSP7Q16829 419 aa12.79□□□□□ -0.36
ATG4B-209ENST00000425239 GCNT6Q5T4J0 391 aa12.79□□□□□ -0.36
ATG4B-209ENST00000425239 SWT1Q5T5J6 900 aaKnown RBP12.79□□□□□ -0.36
ATG4B-209ENST00000425239 DLEU7Q6UYE1 221 aa12.79□□□□□ -0.36
ATG4B-209ENST00000425239 GOLGA6L1Q8N7Z2 621 aa12.79□□□□□ -0.36
ATG4B-209ENST00000425239 OR6N1Q8NGY5 312 aa12.79□□□□□ -0.36
ATG4B-209ENST00000425239 OR5J2Q8NH18 312 aa12.79□□□□□ -0.36
ATG4B-209ENST00000425239 OR6X1Q8NH79 312 aa12.79□□□□□ -0.36
ATG4B-209ENST00000425239 MGARPQ8TDB4 240 aa12.79□□□□□ -0.36
ATG4B-209ENST00000425239 FAM216AQ8WUB2 273 aa12.79□□□□□ -0.36
ATG4B-209ENST00000425239 EPYCQ99645 322 aa12.79□□□□□ -0.36
ATG4B-209ENST00000425239 ASPNQ9BXN1 380 aa12.79□□□□□ -0.36
ATG4B-209ENST00000425239 CACYBPQ9HB71 228 aaKnown RBP12.79□□□□□ -0.36
ATG4B-209ENST00000425239 TMEM27Q9HBJ8 222 aa12.79□□□□□ -0.36
ATG4B-209ENST00000425239 B3GAT2Q9NPZ5 323 aa12.79□□□□□ -0.36
ATG4B-209ENST00000425239 GLTPQ9NZD2 209 aa12.79□□□□□ -0.36
ATG4B-209ENST00000425239 SLC7A8Q9UHI5 535 aa12.79□□□□□ -0.36
ATG4B-209ENST00000425239 DUSP13Q9UII6 198 aa12.79□□□□□ -0.36
ATG4B-209ENST00000425239 C17orf100A8MU93 164 aa12.78□□□□□ -0.36
ATG4B-209ENST00000425239 ERLIN1O75477 346 aa12.78□□□□□ -0.36
ATG4B-209ENST00000425239 RAB36O95755 333 aa12.78□□□□□ -0.36
ATG4B-209ENST00000425239 MT-ATP6P00846 226 aa12.78□□□□□ -0.36
ATG4B-209ENST00000425239 AHCYP23526 432 aa12.78□□□□□ -0.36
ATG4B-209ENST00000425239 CRYBB2P43320 205 aa12.78□□□□□ -0.36
ATG4B-209ENST00000425239 BIDP55957 195 aa12.78□□□□□ -0.36
ATG4B-209ENST00000425239 PCBP3P57721 371 aaKnown RBP12.78□□□□□ -0.36
ATG4B-209ENST00000425239 SCARB2Q14108 478 aa12.78□□□□□ -0.36
ATG4B-209ENST00000425239 TUSC1Q2TAM9 212 aa12.78□□□□□ -0.36
ATG4B-209ENST00000425239 TMEM255AQ5JRV8 349 aa12.78□□□□□ -0.36
ATG4B-209ENST00000425239 PTOV1Q86YD1 416 aa12.78□□□□□ -0.36
ATG4B-209ENST00000425239 LRRC17Q8N6Y2 441 aa12.78□□□□□ -0.36
ATG4B-209ENST00000425239 GPR32P1Q8NGA4 272 aa12.78□□□□□ -0.36
ATG4B-209ENST00000425239 OR4D11Q8NGI4 311 aa12.78□□□□□ -0.36
ATG4B-209ENST00000425239 OR51F2Q8NH61 342 aa12.78□□□□□ -0.36
ATG4B-209ENST00000425239 TLCD1Q96CP7 247 aa12.78□□□□□ -0.36
ATG4B-209ENST00000425239 SH3GL3Q99963 347 aa12.78□□□□□ -0.36
ATG4B-209ENST00000425239 SPATA5L1Q9BVQ7 753 aa12.78□□□□□ -0.36
ATG4B-209ENST00000425239 TMPRSS13Q9BYE2 586 aa12.78□□□□□ -0.36
ATG4B-209ENST00000425239 TCF7L2Q9NQB0 619 aa12.78□□□□□ -0.36
ATG4B-209ENST00000425239 TMEM38BQ9NVV0 291 aa12.78□□□□□ -0.36
ATG4B-209ENST00000425239 FBXL3Q9UKT7 428 aa12.78□□□□□ -0.36
ATG4B-209ENST00000425239 USH1CQ9Y6N9 552 aa12.78□□□□□ -0.36
ATG4B-209ENST00000425239 ARHGAP32A7KAX9 2087 aa12.77□□□□□ -0.36
ATG4B-209ENST00000425239 TRAV20A0A0B4J274 112 aa12.77□□□□□ -0.37
ATG4B-209ENST00000425239 PPIHO43447 177 aaKnown RBP12.77□□□□□ -0.37
ATG4B-209ENST00000425239 FMO6PO60774 539 aa12.77□□□□□ -0.37
ATG4B-209ENST00000425239 SNAP29O95721 258 aa12.77□□□□□ -0.37
ATG4B-209ENST00000425239 PNPP00491 289 aa12.77□□□□□ -0.37
ATG4B-209ENST00000425239 PGA4P0DJD7 388 aa12.77□□□□□ -0.37
ATG4B-209ENST00000425239 PGA3P0DJD8 388 aa12.77□□□□□ -0.37
ATG4B-209ENST00000425239 ADORA3P0DMS8 318 aa12.77□□□□□ -0.37
ATG4B-209ENST00000425239 OR8G3PP0DMU2 310 aa12.77□□□□□ -0.37
ATG4B-209ENST00000425239 CCL2P13500 99 aa12.77□□□□□ -0.37
ATG4B-209ENST00000425239 CSNK1A1P48729 337 aa12.77□□□□□ -0.37
ATG4B-209ENST00000425239 RGS8P57771 180 aaPredicted RBP12.77□□□□□ -0.37
ATG4B-209ENST00000425239 ERVS71-1P61550 626 aa12.77□□□□□ -0.37
ATG4B-209ENST00000425239 RPS23P62266 143 aaKnown RBP12.77□□□□□ -0.37
ATG4B-209ENST00000425239 MYBPC1Q00872 1141 aa12.77□□□□□ -0.37
ATG4B-209ENST00000425239 GALK2Q01415 458 aa12.77□□□□□ -0.37
ATG4B-209ENST00000425239 ZNF74Q16587 644 aa12.77□□□□□ -0.37
ATG4B-209ENST00000425239 ALKBH6Q3KRA9 238 aa12.77□□□□□ -0.37
ATG4B-209ENST00000425239 GKAP1Q5VSY0 366 aaPredicted RBP12.77□□□□□ -0.37
ATG4B-209ENST00000425239 REP15Q6BDI9 236 aa12.77□□□□□ -0.37
ATG4B-209ENST00000425239 FAHD2BQ6P2I3 314 aaPredicted RBP12.77□□□□□ -0.37
ATG4B-209ENST00000425239 ZNF613Q6PF04 617 aa12.77□□□□□ -0.37
ATG4B-209ENST00000425239 SLC35D2Q76EJ3 337 aa12.77□□□□□ -0.37
ATG4B-209ENST00000425239 CROCCP2Q86T23 111 aa12.77□□□□□ -0.37
ATG4B-209ENST00000425239 PEG10Q86TG7 708 aaKnown RBP12.77□□□□□ -0.37
ATG4B-209ENST00000425239 KRT73Q86Y46 540 aa12.77□□□□□ -0.37
ATG4B-209ENST00000425239 RBM45Q8IUH3 476 aaKnown RBP12.77□□□□□ -0.37
ATG4B-209ENST00000425239 TRIM44Q96DX7 344 aaPredicted RBP12.77□□□□□ -0.37
ATG4B-209ENST00000425239 SPDL1Q96EA4 605 aa12.77□□□□□ -0.37
ATG4B-209ENST00000425239 FAHD2AQ96GK7 314 aa12.77□□□□□ -0.37
ATG4B-209ENST00000425239 SEPHS2Q99611 448 aa12.77□□□□□ -0.37
ATG4B-209ENST00000425239 ARHGDIGQ99819 225 aa12.77□□□□□ -0.37
ATG4B-209ENST00000425239 EBF4Q9BQW3 602 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms