RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 KLHL12Q53G59 568 aa9.21□□□□□ -0.94
MDC1-205ENST00000425072 LCN1P1Q5VSP4 162 aa9.21□□□□□ -0.94
MDC1-205ENST00000425072 ZNF324BQ6AW86 544 aaPredicted RBP9.21□□□□□ -0.94
MDC1-205ENST00000425072 P4HA3Q7Z4N8 544 aa9.21□□□□□ -0.94
MDC1-205ENST00000425072 STX19Q8N4C7 294 aa9.21□□□□□ -0.94
MDC1-205ENST00000425072 LSM14AQ8ND56 463 aaKnown RBP9.21□□□□□ -0.94
MDC1-205ENST00000425072 TSPAN14Q8NG11 270 aa9.21□□□□□ -0.94
MDC1-205ENST00000425072 OR9K2Q8NGE7 335 aa9.21□□□□□ -0.94
MDC1-205ENST00000425072 ZNF519Q8TB69 540 aa9.21□□□□□ -0.94
MDC1-205ENST00000425072 APH1BQ8WW43 257 aa9.21□□□□□ -0.94
MDC1-205ENST00000425072 ASB10Q8WXI3 467 aa9.21□□□□□ -0.94
MDC1-205ENST00000425072 GGHQ92820 318 aa9.21□□□□□ -0.94
MDC1-205ENST00000425072 RASD2Q96D21 266 aa9.21□□□□□ -0.94
MDC1-205ENST00000425072 TXNDC15Q96J42 360 aa9.21□□□□□ -0.94
MDC1-205ENST00000425072 KCNK17Q96T54 332 aa9.21□□□□□ -0.94
MDC1-205ENST00000425072 NMNAT3Q96T66 252 aa9.21□□□□□ -0.94
MDC1-205ENST00000425072 SRXN1Q9BYN0 137 aa9.21□□□□□ -0.94
MDC1-205ENST00000425072 OR51V1Q9H2C8 321 aa9.21□□□□□ -0.94
MDC1-205ENST00000425072 ZNF696Q9H7X3 374 aa9.21□□□□□ -0.94
MDC1-205ENST00000425072 SRA1Q9HD15 236 aaKnown RBP9.21□□□□□ -0.94
MDC1-205ENST00000425072 HINT3Q9NQE9 182 aaKnown RBP9.21□□□□□ -0.94
MDC1-205ENST00000425072 CHCHD3Q9NX63 227 aaKnown RBP9.21□□□□□ -0.94
MDC1-205ENST00000425072 HAO2Q9NYQ3 351 aa9.21□□□□□ -0.94
MDC1-205ENST00000425072 VSX1Q9NZR4 365 aaPredicted RBP9.21□□□□□ -0.94
MDC1-205ENST00000425072 B3GAT1Q9P2W7 334 aa9.21□□□□□ -0.94
MDC1-205ENST00000425072 SPRR3Q9UBC9 169 aa9.21□□□□□ -0.94
MDC1-205ENST00000425072 AASSQ9UDR5 926 aa9.21□□□□□ -0.94
MDC1-205ENST00000425072 PSORS1C1Q9UIG5 152 aa9.21□□□□□ -0.94
MDC1-205ENST00000425072 GPR52Q9Y2T5 361 aa9.21□□□□□ -0.94
MDC1-205ENST00000425072 SNX5Q9Y5X3 404 aa9.21□□□□□ -0.94
MDC1-205ENST00000425072 LIPGQ9Y5X9 500 aa9.21□□□□□ -0.94
MDC1-205ENST00000425072 FKBP7Q9Y680 259 aa9.21□□□□□ -0.94
MDC1-205ENST00000425072 MGAQ8IWI9 3026 aa9.21□□□□□ -0.94
MDC1-205ENST00000425072 IGKV3D-15A0A087WSY6 115 aa9.2□□□□□ -0.94
MDC1-205ENST00000425072 IGHV3-15A0A0B4J1V0 119 aa9.2□□□□□ -0.94
MDC1-205ENST00000425072 SLC22A23A1A5C7 686 aa9.2□□□□□ -0.94
MDC1-205ENST00000425072 SLC35F4A4IF30 521 aa9.2□□□□□ -0.94
MDC1-205ENST00000425072 OR6C68A6NDL8 312 aa9.2□□□□□ -0.94
MDC1-205ENST00000425072 SLC22A20A6NK97 555 aa9.2□□□□□ -0.94
MDC1-205ENST00000425072 RGS10O43665 173 aa9.2□□□□□ -0.94
MDC1-205ENST00000425072 WDR1O75083 606 aa9.2□□□□□ -0.94
MDC1-205ENST00000425072 MRPL33O75394 65 aaKnown RBP9.2□□□□□ -0.94
MDC1-205ENST00000425072 KHDRBS3O75525 346 aaKnown RBP9.2□□□□□ -0.94
MDC1-205ENST00000425072 TRMUO75648 421 aaKnown RBP9.2□□□□□ -0.94
MDC1-205ENST00000425072 SMNDC1O75940 238 aaKnown RBP eCLIP9.2□□□□□ -0.94
MDC1-205ENST00000425072 GLCEO94923 617 aa9.2□□□□□ -0.94
MDC1-205ENST00000425072 PIPP12273 146 aaPredicted RBP9.2□□□□□ -0.94
MDC1-205ENST00000425072 DCKP27707 260 aa9.2□□□□□ -0.94
MDC1-205ENST00000425072 MLLT10P55197 1068 aa9.2□□□□□ -0.94
MDC1-205ENST00000425072 CLDN17P56750 224 aa9.2□□□□□ -0.94
MDC1-205ENST00000425072 CLRN1P58418 232 aa9.2□□□□□ -0.94
MDC1-205ENST00000425072 RPS7P62081 194 aaKnown RBP9.2□□□□□ -0.94
MDC1-205ENST00000425072 RAB40BQ12829 278 aa9.2□□□□□ -0.94
MDC1-205ENST00000425072 APOFQ13790 326 aa9.2□□□□□ -0.94
MDC1-205ENST00000425072 EEF1A1P5Q5VTE0 462 aa9.2□□□□□ -0.94
MDC1-205ENST00000425072 OR2A2Q6IF42 318 aa9.2□□□□□ -0.94
MDC1-205ENST00000425072 LAIR2Q6ISS4 152 aa9.2□□□□□ -0.94
MDC1-205ENST00000425072 C19orf48Q6RUI8 117 aa9.2□□□□□ -0.94
MDC1-205ENST00000425072 AAED1Q7RTV5 226 aa9.2□□□□□ -0.94
MDC1-205ENST00000425072 CYB561A3Q8NBI2 242 aa9.2□□□□□ -0.94
MDC1-205ENST00000425072 SDR9C7Q8NEX9 313 aa9.2□□□□□ -0.94
MDC1-205ENST00000425072 WNT2BQ93097 391 aa9.2□□□□□ -0.94
MDC1-205ENST00000425072 TMEM80Q96HE8 168 aa9.2□□□□□ -0.94
MDC1-205ENST00000425072 ZNF845Q96IR2 970 aaPredicted RBP9.2□□□□□ -0.94
MDC1-205ENST00000425072 TM9SF2Q99805 663 aa9.2□□□□□ -0.94
MDC1-205ENST00000425072 COPS4Q9BT78 406 aa9.2□□□□□ -0.94
MDC1-205ENST00000425072 MRPL13Q9BYD1 178 aaKnown RBP9.2□□□□□ -0.94
MDC1-205ENST00000425072 NMNAT2Q9BZQ4 307 aa9.2□□□□□ -0.94
MDC1-205ENST00000425072 VCX3AQ9NNX9 186 aa9.2□□□□□ -0.94
MDC1-205ENST00000425072 AMBNQ9NP70 447 aa9.2□□□□□ -0.94
MDC1-205ENST00000425072 B3GAT2Q9NPZ5 323 aa9.2□□□□□ -0.94
MDC1-205ENST00000425072 DNAJC27Q9NZQ0 273 aa9.2□□□□□ -0.94
MDC1-205ENST00000425072 KLHL13Q9P2N7 655 aa9.2□□□□□ -0.94
MDC1-205ENST00000425072 B9D1Q9UPM9 204 aa9.2□□□□□ -0.94
MDC1-205ENST00000425072 RCE1Q9Y256 329 aa9.2□□□□□ -0.94
MDC1-205ENST00000425072 PCDHGB5Q9Y5G0 923 aa9.2□□□□□ -0.94
MDC1-205ENST00000425072 KIAA1549Q9HCM3 1950 aa9.2□□□□□ -0.94
MDC1-205ENST00000425072 TEP1Q99973 2627 aaKnown RBP9.19□□□□□ -0.94
MDC1-205ENST00000425072 HECTD1Q9ULT8 2610 aa9.19□□□□□ -0.94
MDC1-205ENST00000425072 TRIM64A6NGJ6 449 aa9.19□□□□□ -0.94
MDC1-205ENST00000425072 CD8B2A6NJW9 211 aa9.19□□□□□ -0.94
MDC1-205ENST00000425072 FAM183AA6NL82 134 aa9.19□□□□□ -0.94
MDC1-205ENST00000425072 FIGNL2A6NMB9 653 aa9.19□□□□□ -0.94
MDC1-205ENST00000425072 ZNF716A6NP11 495 aa9.19□□□□□ -0.94
MDC1-205ENST00000425072 TTLL8A6PVC2 850 aa9.19□□□□□ -0.94
MDC1-205ENST00000425072 ZNF814B7Z6K7 855 aa9.19□□□□□ -0.94
MDC1-205ENST00000425072 PRRG2O14669 202 aa9.19□□□□□ -0.94
MDC1-205ENST00000425072 TRAF3IP2O43734 574 aaPredicted RBP9.19□□□□□ -0.94
MDC1-205ENST00000425072 XPNPEP2O43895 674 aa9.19□□□□□ -0.94
MDC1-205ENST00000425072 SLC43A1O75387 559 aa9.19□□□□□ -0.94
MDC1-205ENST00000425072 DBTP11182 482 aaKnown RBP9.19□□□□□ -0.94
MDC1-205ENST00000425072 SLC15A1P46059 708 aa9.19□□□□□ -0.94
MDC1-205ENST00000425072 TUBA4AP68366 448 aa9.19□□□□□ -0.94
MDC1-205ENST00000425072 SLC35A2P78381 396 aa9.19□□□□□ -0.94
MDC1-205ENST00000425072 ST3GAL4Q11206 333 aa9.19□□□□□ -0.94
MDC1-205ENST00000425072 CAMK2DQ13557 499 aa9.19□□□□□ -0.94
MDC1-205ENST00000425072 SMN1Q16637 294 aaKnown RBP9.19□□□□□ -0.94
MDC1-205ENST00000425072 MESTQ5EB52 335 aa9.19□□□□□ -0.94
MDC1-205ENST00000425072 ABLIM2Q6H8Q1 611 aa9.19□□□□□ -0.94
MDC1-205ENST00000425072 NIPAL3Q6P499 406 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms