RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 CENPBD1B2RD01 187 aa15□□□□□ -0.01
COL7A1-202ENST00000422991 BHLHE40O14503 412 aa15□□□□□ -0.01
COL7A1-202ENST00000422991 SOCS2O14508 198 aa15□□□□□ -0.01
COL7A1-202ENST00000422991 ARPC3O15145 178 aa15□□□□□ -0.01
COL7A1-202ENST00000422991 MGRN1O60291 552 aa15□□□□□ -0.01
COL7A1-202ENST00000422991 MITFO75030 526 aaPredicted RBP15□□□□□ -0.01
COL7A1-202ENST00000422991 IGHG1P01857 330 aa15□□□□□ -0.01
COL7A1-202ENST00000422991 ALPLP05186 524 aa15□□□□□ -0.01
COL7A1-202ENST00000422991 ACVR1BP36896 505 aa15□□□□□ -0.01
COL7A1-202ENST00000422991 RPS6KA3P51812 740 aa15□□□□□ -0.01
COL7A1-202ENST00000422991 RAP1BP61224 184 aa15□□□□□ -0.01
COL7A1-202ENST00000422991 RAP1AP62834 184 aa15□□□□□ -0.01
COL7A1-202ENST00000422991 TFF3Q07654 80 aa15□□□□□ -0.01
COL7A1-202ENST00000422991 TRIP10Q15642 601 aa15□□□□□ -0.01
COL7A1-202ENST00000422991 MESTQ5EB52 335 aa15□□□□□ -0.01
COL7A1-202ENST00000422991 BEND4Q6ZU67 534 aa15□□□□□ -0.01
COL7A1-202ENST00000422991 GABRG1Q8N1C3 465 aa15□□□□□ -0.01
COL7A1-202ENST00000422991 ARIH2OSQ8N7S6 290 aa15□□□□□ -0.01
COL7A1-202ENST00000422991 NOXO1Q8NFA2 376 aa15□□□□□ -0.01
COL7A1-202ENST00000422991 TEX47Q8TBZ9 253 aa15□□□□□ -0.01
COL7A1-202ENST00000422991 MAGEE2Q8TD90 523 aaPredicted RBP15□□□□□ -0.01
COL7A1-202ENST00000422991 ZNF566Q969W8 418 aa15□□□□□ -0.01
COL7A1-202ENST00000422991 EME1Q96AY2 570 aa15□□□□□ -0.01
COL7A1-202ENST00000422991 RASD2Q96D21 266 aa15□□□□□ -0.01
COL7A1-202ENST00000422991 LRR1Q96L50 414 aa15□□□□□ -0.01
COL7A1-202ENST00000422991 ERMAPQ96PL5 475 aaPredicted RBP15□□□□□ -0.01
COL7A1-202ENST00000422991 ALKBH3Q96Q83 286 aaPredicted RBP15□□□□□ -0.01
COL7A1-202ENST00000422991 KCNK17Q96T54 332 aa15□□□□□ -0.01
COL7A1-202ENST00000422991 RBM24Q9BX46 236 aaKnown RBP15□□□□□ -0.01
COL7A1-202ENST00000422991 TSSK6Q9BXA6 273 aa15□□□□□ -0.01
COL7A1-202ENST00000422991 MRPL13Q9BYD1 178 aaKnown RBP15□□□□□ -0.01
COL7A1-202ENST00000422991 GRHPRQ9UBQ7 328 aa15□□□□□ -0.01
COL7A1-202ENST00000422991 IER3IP1Q9Y5U9 82 aa15□□□□□ -0.01
COL7A1-202ENST00000422991 H3BN98 237 aa14.99□□□□□ -0.01
COL7A1-202ENST00000422991 IMPA2O14732 288 aa14.99□□□□□ -0.01
COL7A1-202ENST00000422991 CASQ2O14958 399 aaPredicted RBP14.99□□□□□ -0.01
COL7A1-202ENST00000422991 UPK3AO75631 287 aa14.99□□□□□ -0.01
COL7A1-202ENST00000422991 TRMUO75648 421 aaKnown RBP14.99□□□□□ -0.01
COL7A1-202ENST00000422991 ACADSP16219 412 aa14.99□□□□□ -0.01
COL7A1-202ENST00000422991 CSNK1A1P48729 337 aa14.99□□□□□ -0.01
COL7A1-202ENST00000422991 ALDH3A2P51648 485 aa14.99□□□□□ -0.01
COL7A1-202ENST00000422991 KRR1Q13601 381 aaKnown RBP14.99□□□□□ -0.01
COL7A1-202ENST00000422991 LINGO2Q7L985 606 aa14.99□□□□□ -0.01
COL7A1-202ENST00000422991 UBE2J2Q8N2K1 259 aa14.99□□□□□ -0.01
COL7A1-202ENST00000422991 GPR137CQ8N3F9 429 aa14.99□□□□□ -0.01
COL7A1-202ENST00000422991 LNX2Q8N448 690 aa14.99□□□□□ -0.01
COL7A1-202ENST00000422991 OR2T33Q8NG76 320 aa14.99□□□□□ -0.01
COL7A1-202ENST00000422991 OR4Q3Q8NH05 313 aa14.99□□□□□ -0.01
COL7A1-202ENST00000422991 HDAC2Q92769 488 aaKnown RBP14.99□□□□□ -0.01
COL7A1-202ENST00000422991 TMEM54Q969K7 222 aa14.99□□□□□ -0.01
COL7A1-202ENST00000422991 ALG12Q9BV10 488 aa14.99□□□□□ -0.01
COL7A1-202ENST00000422991 ASB6Q9NWX5 421 aa14.99□□□□□ -0.01
COL7A1-202ENST00000422991 GALNT8Q9NY28 637 aa14.99□□□□□ -0.01
COL7A1-202ENST00000422991 UPB1Q9UBR1 384 aa14.99□□□□□ -0.01
COL7A1-202ENST00000422991 PLEKHB1Q9UF11 243 aaPredicted RBP14.99□□□□□ -0.01
COL7A1-202ENST00000422991 ENOPH1Q9UHY7 261 aa14.99□□□□□ -0.01
COL7A1-202ENST00000422991 IDH3BO43837 385 aa14.98□□□□□ -0.01
COL7A1-202ENST00000422991 COX5AP20674 150 aa14.98□□□□□ -0.01
COL7A1-202ENST00000422991 POU1F1P28069 291 aa14.98□□□□□ -0.01
COL7A1-202ENST00000422991 PEX2P28328 305 aa14.98□□□□□ -0.01
COL7A1-202ENST00000422991 CRISP1P54107 249 aa14.98□□□□□ -0.01
COL7A1-202ENST00000422991 CLRN1P58418 232 aa14.98□□□□□ -0.01
COL7A1-202ENST00000422991 ESRRGP62508 458 aa14.98□□□□□ -0.01
COL7A1-202ENST00000422991 FAPQ12884 760 aa14.98□□□□□ -0.01
COL7A1-202ENST00000422991 RIPK1Q13546 671 aa14.98□□□□□ -0.01
COL7A1-202ENST00000422991 HIST3H3Q16695 136 aa14.98□□□□□ -0.01
COL7A1-202ENST00000422991 PGGHGQ32M88 737 aa14.98□□□□□ -0.01
COL7A1-202ENST00000422991 PHYHD1Q5SRE7 291 aa14.98□□□□□ -0.01
COL7A1-202ENST00000422991 ZBTB49Q6ZSB9 765 aa14.98□□□□□ -0.01
COL7A1-202ENST00000422991 ADCK1Q86TW2 530 aa14.98□□□□□ -0.01
COL7A1-202ENST00000422991 IQCF1Q8N6M8 205 aa14.98□□□□□ -0.01
COL7A1-202ENST00000422991 SYT14Q8NB59 555 aa14.98□□□□□ -0.01
COL7A1-202ENST00000422991 OR6N1Q8NGY5 312 aa14.98□□□□□ -0.01
COL7A1-202ENST00000422991 RNASE6Q93091 150 aaKnown RBP14.98□□□□□ -0.01
COL7A1-202ENST00000422991 NMD3Q96D46 503 aaKnown RBP14.98□□□□□ -0.01
COL7A1-202ENST00000422991 SLC29A1Q99808 456 aa14.98□□□□□ -0.01
COL7A1-202ENST00000422991 GABARAPL3Q9BY60 117 aa14.98□□□□□ -0.01
COL7A1-202ENST00000422991 SLC25A19Q9HC21 320 aa14.98□□□□□ -0.01
COL7A1-202ENST00000422991 ELOVL5Q9NYP7 299 aa14.98□□□□□ -0.01
COL7A1-202ENST00000422991 GLTPQ9NZD2 209 aa14.98□□□□□ -0.01
COL7A1-202ENST00000422991 BAIAP2Q9UQB8 552 aa14.98□□□□□ -0.01
COL7A1-202ENST00000422991 ANKHD1Q8IWZ3 2542 aaKnown RBP14.98□□□□□ -0.01
COL7A1-202ENST00000422991 ZNF587BE7ETH6 402 aa14.97□□□□□ -0.01
COL7A1-202ENST00000422991 RPL36A-HNRNPH2H7BZ11 118 aa14.97□□□□□ -0.01
COL7A1-202ENST00000422991 H7C1C5 153 aa14.97□□□□□ -0.01
COL7A1-202ENST00000422991 M0R3G1 203 aa14.97□□□□□ -0.01
COL7A1-202ENST00000422991 XKRYO14609 159 aa14.97□□□□□ -0.01
COL7A1-202ENST00000422991 KRT33AO76009 404 aa14.97□□□□□ -0.01
COL7A1-202ENST00000422991 ITGA5P08648 1049 aa14.97□□□□□ -0.01
COL7A1-202ENST00000422991 IGHV1-2P23083 117 aa14.97□□□□□ -0.01
COL7A1-202ENST00000422991 GRK5P34947 590 aa14.97□□□□□ -0.01
COL7A1-202ENST00000422991 CD79BP40259 229 aa14.97□□□□□ -0.01
COL7A1-202ENST00000422991 PCYT1AP49585 367 aa14.97□□□□□ -0.01
COL7A1-202ENST00000422991 FOXG1P55316 489 aaPredicted RBP14.97□□□□□ -0.01
COL7A1-202ENST00000422991 LCN6P62502 163 aa14.97□□□□□ -0.01
COL7A1-202ENST00000422991 SLC34A1Q06495 639 aa14.97□□□□□ -0.01
COL7A1-202ENST00000422991 P2RY6Q15077 328 aa14.97□□□□□ -0.01
COL7A1-202ENST00000422991 OGFRL1Q5TC84 451 aaPredicted RBP14.97□□□□□ -0.01
COL7A1-202ENST00000422991 LPCAT4Q643R3 524 aa14.97□□□□□ -0.01
COL7A1-202ENST00000422991 SLC27A4Q6P1M0 643 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms