RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 IGFBP1P08833 259 aaPredicted RBP2.16□□□□□ -2.06
MCF2-204ENST00000414978 SLC2A3P11169 496 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 ABOP16442 354 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 BCL3P20749 454 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 ANXA13P27216 316 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 CD82P27701 267 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 GTF2H1P32780 548 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 CCR2P41597 374 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 GLIPR1P48060 266 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 CDK16Q00536 496 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 CYP24A1Q07973 514 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 LAMTOR4Q0VGL1 99 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 SMARCB1Q12824 385 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 ZNF77Q15935 545 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 SSX2Q16385 188 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 FAM106AQ4KMX7 169 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 RFTN2Q52LD8 501 aaPredicted RBP2.16□□□□□ -2.06
MCF2-204ENST00000414978 ZNF585BQ52M93 769 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 TECRLQ5HYJ1 363 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 FAM120AOSQ5T036 256 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 PRR22Q8IZ63 422 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 SLC35F6Q8N357 371 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 MFSD9Q8NBP5 474 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 FAM83FQ8NEG4 500 aaPredicted RBP2.16□□□□□ -2.06
MCF2-204ENST00000414978 NUBPLQ8TB37 319 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 FBXO25Q8TCJ0 367 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 SSC4DQ8WTU2 575 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 TM9SF4Q92544 642 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 ITCHQ96J02 903 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 ZNF317Q96PQ6 595 aaPredicted RBP2.16□□□□□ -2.06
MCF2-204ENST00000414978 C20orf24Q9BUV8 137 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 HES7Q9BYE0 225 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 CSNK1G1Q9HCP0 422 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 UXTQ9UBK9 157 aaPredicted RBP2.16□□□□□ -2.06
MCF2-204ENST00000414978 KLK11Q9UBX7 282 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 SEC14L4Q9UDX3 406 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 MGAT4AQ9UM21 535 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 PPP1R3CQ9UQK1 317 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 EXOGQ9Y2C4 368 aaKnown RBP2.16□□□□□ -2.06
MCF2-204ENST00000414978 SELENOKQ9Y6D0 94 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 AKAP13Q12802 2813 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 LRIT2A6NDA9 550 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 ARL5CA6NH57 179 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 BCKDKO14874 412 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 ARPC1BO15143 372 aaKnown RBP2.16□□□□□ -2.06
MCF2-204ENST00000414978 PSTPIP1O43586 416 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 PDE5AO76074 875 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 LCA5LO95447 670 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 H6PDO95479 791 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 SEC24AO95486 1093 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 DBTP11182 482 aaKnown RBP2.16□□□□□ -2.06
MCF2-204ENST00000414978 MMP11P24347 488 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 TEAD1P28347 426 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 HTR1FP30939 366 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 NAA10P41227 235 aaPredicted RBP2.16□□□□□ -2.06
MCF2-204ENST00000414978 ACOT2P49753 483 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 RASSF2P50749 326 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 CDH6P55285 790 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 RAB11AP62491 216 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 TNNC1P63316 161 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 ZP4Q12836 540 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 RAB11BQ15907 218 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 GABRA6Q16445 453 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 OR5M10Q6IEU7 315 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 CAPRIN2Q6IMN6 1127 aaKnown RBP2.16□□□□□ -2.06
MCF2-204ENST00000414978 HACD2Q6Y1H2 254 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 ABHD12BQ7Z5M8 362 aaPredicted RBP2.16□□□□□ -2.06
MCF2-204ENST00000414978 HOGA1Q86XE5 327 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 TMEM99Q8N816 258 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 ASCC1Q8N9N2 400 aaKnown RBP2.16□□□□□ -2.06
MCF2-204ENST00000414978 SNX31Q8N9S9 440 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 FBXL13Q8NEE6 735 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 OR7G1Q8NGA0 311 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 CYP2S1Q96SQ9 504 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 DUSP16Q9BY84 665 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 IQCGQ9H095 443 aaKnown RBP2.16□□□□□ -2.06
MCF2-204ENST00000414978 RBKSQ9H477 322 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 NXF3Q9H4D5 531 aaKnown RBP2.16□□□□□ -2.06
MCF2-204ENST00000414978 POPDC2Q9HBU9 364 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 MCCC2Q9HCC0 563 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 TREX1Q9NSU2 369 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 RBAKQ9NYW8 714 aaPredicted RBP2.16□□□□□ -2.06
MCF2-204ENST00000414978 RASD1Q9Y272 281 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 PPIAL4AQ9Y536 164 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 TIMM10BQ9Y5J6 103 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 SLCO1B1Q9Y6L6 691 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 FBN3Q75N90 2809 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 A0A087X0T9 212 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 A0A1B0GW55 424 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 PCP4L1A6NKN8 68 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 LRRIQ3A6PVS8 624 aaPredicted RBP2.16□□□□□ -2.06
MCF2-204ENST00000414978 C12orf71A8MTZ7 269 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 MKRN2OSH3BPM6 223 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 K7EQS6 105 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 ITGB1BP1O14713 200 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 FZD7O75084 574 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 SCELO95171 688 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 STSP08842 583 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 FAM228BP0C875 321 aa2.16□□□□□ -2.06
MCF2-204ENST00000414978 DUX4L2P0CJ85 424 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms