RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 TRDV1A0A1B0GX56 115 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 J3QRE1 110 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 WISP1O95388 367 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 SFTPCP11686 197 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 BMP7P18075 431 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 PGCP20142 388 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 RFC3P40938 356 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 CTBP2P56545 445 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 DSCR4P56555 118 aaPredicted RBP8.95□□□□□ -0.98
DDB1-202ENST00000414411 CBX3Q13185 183 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 CBFBQ13951 182 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 SLC25A53Q5H9E4 307 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 NIPAL3Q6P499 406 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 PLBD1Q6P4A8 553 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 MZT2AQ6P582 158 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 GDPD3Q7L5L3 318 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 LNX2Q8N448 690 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 ARIH2OSQ8N7S6 290 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 ZFP41Q8N8Y5 198 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 OR4K17Q8NGC6 315 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 BPIFA2Q96DR5 249 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 TXNDC15Q96J42 360 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 COQ7Q99807 217 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 ZNF559Q9BR84 538 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 KATNB1Q9BVA0 655 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 TRIM2Q9C040 744 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 ADAM19Q9H013 955 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 ENKD1Q9H0I2 346 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 ZNF703Q9H7S9 590 aaPredicted RBP8.95□□□□□ -0.98
DDB1-202ENST00000414411 PTGES2Q9H7Z7 377 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 TNFRSF10DQ9UBN6 386 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 SIGLEC7Q9Y286 467 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 GSTK1Q9Y2Q3 226 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 MED31Q9Y3C7 131 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 MPDZO75970 2070 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 RP1L1Q8IWN7 2480 aaPredicted RBP8.95□□□□□ -0.98
DDB1-202ENST00000414411 CHP2O43745 196 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 GMFGO60234 142 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 TPPPO94811 219 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 RCBTB2O95199 551 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 HPNP05981 417 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 PRKCAP17252 672 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 DPP4P27487 766 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 SRD5A2P31213 254 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 ATP6V1E1P36543 226 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 EIF2B2P49770 351 aaKnown RBP8.95□□□□□ -0.98
DDB1-202ENST00000414411 CCR4P51679 360 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 QPRTQ15274 297 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 PLPPR5Q32ZL2 321 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 GLYR1Q49A26 553 aaPredicted RBP8.95□□□□□ -0.98
DDB1-202ENST00000414411 ZMAT1Q5H9K5 638 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 SMARCD3Q6STE5 483 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 ZNF322Q6U7Q0 402 aaPredicted RBP8.95□□□□□ -0.98
DDB1-202ENST00000414411 CCBE1Q6UXH8 406 aaPredicted RBP8.95□□□□□ -0.98
DDB1-202ENST00000414411 CDK20Q8IZL9 346 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 TMEM251Q8N6I4 163 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 OR51G2Q8NGK0 314 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 OR13C2Q8NGS9 318 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 SETD6Q8TBK2 473 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 SPRYD4Q8WW59 207 aaPredicted RBP8.95□□□□□ -0.98
DDB1-202ENST00000414411 ST8SIA1Q92185 356 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 HPS1Q92902 700 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 NPAS1Q99742 590 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 ZNF426Q9BUY5 554 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 SRRQ9GZT4 340 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 MIXL1Q9H2W2 232 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 ZDHHC11Q9H8X9 412 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 TMEM27Q9HBJ8 222 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 MEPEQ9NQ76 525 aaPredicted RBP8.95□□□□□ -0.98
DDB1-202ENST00000414411 CMC2Q9NRP2 79 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 TBC1D24Q9ULP9 559 aa8.95□□□□□ -0.98
DDB1-202ENST00000414411 A0A087WZY1 265 aa8.94□□□□□ -0.98
DDB1-202ENST00000414411 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.94□□□□□ -0.98
DDB1-202ENST00000414411 A0A1B0GWA3 101 aa8.94□□□□□ -0.98
DDB1-202ENST00000414411 A0A1W2PQL4 384 aaPredicted RBP8.94□□□□□ -0.98
DDB1-202ENST00000414411 EFNA2O43921 213 aa8.94□□□□□ -0.98
DDB1-202ENST00000414411 CDC40O60508 579 aaKnown RBP eCLIP8.94□□□□□ -0.98
DDB1-202ENST00000414411 NUDT14O95848 222 aa8.94□□□□□ -0.98
DDB1-202ENST00000414411 APOA1P02647 267 aa8.94□□□□□ -0.98
DDB1-202ENST00000414411 GAAP10253 952 aa8.94□□□□□ -0.98
DDB1-202ENST00000414411 SAGP10523 405 aaPredicted RBP8.94□□□□□ -0.98
DDB1-202ENST00000414411 IMPDH2P12268 514 aa8.94□□□□□ -0.98
DDB1-202ENST00000414411 CELP19835 753 aa8.94□□□□□ -0.98
DDB1-202ENST00000414411 PAICSP22234 425 aaKnown RBP8.94□□□□□ -0.98
DDB1-202ENST00000414411 PPIAP62937 165 aaKnown RBP8.94□□□□□ -0.98
DDB1-202ENST00000414411 PMP22Q01453 160 aa8.94□□□□□ -0.98
DDB1-202ENST00000414411 BDH1Q02338 343 aa8.94□□□□□ -0.98
DDB1-202ENST00000414411 SLC35F1Q5T1Q4 408 aa8.94□□□□□ -0.98
DDB1-202ENST00000414411 ARMC4Q5T2S8 1044 aa8.94□□□□□ -0.98
DDB1-202ENST00000414411 DDI2Q5TDH0 399 aa8.94□□□□□ -0.98
DDB1-202ENST00000414411 VASNQ6EMK4 673 aa8.94□□□□□ -0.98
DDB1-202ENST00000414411 WBP2NLQ6ICG8 309 aa8.94□□□□□ -0.98
DDB1-202ENST00000414411 LINC00114Q6XXX2 140 aa8.94□□□□□ -0.98
DDB1-202ENST00000414411 MEPCEQ7L2J0 689 aaKnown RBP8.94□□□□□ -0.98
DDB1-202ENST00000414411 FAM98AQ8NCA5 519 aaKnown RBP8.94□□□□□ -0.98
DDB1-202ENST00000414411 POC1BQ8TC44 478 aa8.94□□□□□ -0.98
DDB1-202ENST00000414411 AP3S1Q92572 193 aa8.94□□□□□ -0.98
DDB1-202ENST00000414411 KISS1RQ969F8 398 aaPredicted RBP8.94□□□□□ -0.98
DDB1-202ENST00000414411 OTULINQ96BN8 352 aa8.94□□□□□ -0.98
DDB1-202ENST00000414411 C3orf49Q96BT1 292 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms