RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 FOXC2Q99958 501 aa12.88□□□□□ -0.35
CHD1-202ENST00000414220 C1QTNF6Q9BXI9 259 aa12.88□□□□□ -0.35
CHD1-202ENST00000414220 TXNIPQ9H3M7 391 aa12.88□□□□□ -0.35
CHD1-202ENST00000414220 CXorf56Q9H5V9 222 aa12.88□□□□□ -0.35
CHD1-202ENST00000414220 ABCA12Q86UK0 2595 aa12.87□□□□□ -0.35
CHD1-202ENST00000414220 APCP25054 2843 aa12.87□□□□□ -0.35
CHD1-202ENST00000414220 VSTM5A8MXK1 200 aa12.87□□□□□ -0.35
CHD1-202ENST00000414220 OR10H3O60404 316 aa12.87□□□□□ -0.35
CHD1-202ENST00000414220 SMPD2O60906 423 aa12.87□□□□□ -0.35
CHD1-202ENST00000414220 DIRAS1O95057 198 aa12.87□□□□□ -0.35
CHD1-202ENST00000414220 ATE1O95260 518 aa12.87□□□□□ -0.35
CHD1-202ENST00000414220 CRYAAP02489 173 aa12.87□□□□□ -0.35
CHD1-202ENST00000414220 TSPAN19P0C672 248 aa12.87□□□□□ -0.35
CHD1-202ENST00000414220 RRM2P31350 389 aa12.87□□□□□ -0.35
CHD1-202ENST00000414220 ARR3P36575 388 aa12.87□□□□□ -0.35
CHD1-202ENST00000414220 DEFB113Q30KQ7 82 aa12.87□□□□□ -0.35
CHD1-202ENST00000414220 C3orf36Q3SXR2 165 aa12.87□□□□□ -0.35
CHD1-202ENST00000414220 ZBED5Q49AG3 693 aa12.87□□□□□ -0.35
CHD1-202ENST00000414220 LINGO2Q7L985 606 aa12.87□□□□□ -0.35
CHD1-202ENST00000414220 PIWIL3Q7Z3Z3 882 aaKnown RBP12.87□□□□□ -0.35
CHD1-202ENST00000414220 FAM169BQ8N8A8 192 aa12.87□□□□□ -0.35
CHD1-202ENST00000414220 IL17RDQ8NFM7 739 aa12.87□□□□□ -0.35
CHD1-202ENST00000414220 OR4K5Q8NGD3 323 aa12.87□□□□□ -0.35
CHD1-202ENST00000414220 MOSPD2Q8NHP6 518 aa12.87□□□□□ -0.35
CHD1-202ENST00000414220 ASB10Q8WXI3 467 aa12.87□□□□□ -0.35
CHD1-202ENST00000414220 CCDC124Q96CT7 223 aaKnown RBP12.87□□□□□ -0.35
CHD1-202ENST00000414220 TNFRSF13CQ96RJ3 184 aa12.87□□□□□ -0.35
CHD1-202ENST00000414220 FOXB1Q99853 325 aa12.87□□□□□ -0.35
CHD1-202ENST00000414220 KCNN2Q9H2S1 579 aa12.87□□□□□ -0.35
CHD1-202ENST00000414220 DENND2DQ9H6A0 471 aaPredicted RBP12.87□□□□□ -0.35
CHD1-202ENST00000414220 CISD1Q9NZ45 108 aaKnown RBP12.87□□□□□ -0.35
CHD1-202ENST00000414220 GRHPRQ9UBQ7 328 aa12.87□□□□□ -0.35
CHD1-202ENST00000414220 FBXL3Q9UKT7 428 aa12.87□□□□□ -0.35
CHD1-202ENST00000414220 TRAV27A0A087WT01 109 aa12.86□□□□□ -0.35
CHD1-202ENST00000414220 A0A1W2PPR1 153 aa12.86□□□□□ -0.35
CHD1-202ENST00000414220 XKRYO14609 159 aa12.86□□□□□ -0.35
CHD1-202ENST00000414220 ARHGEF9O43307 516 aa12.86□□□□□ -0.35
CHD1-202ENST00000414220 DHHO43323 396 aa12.86□□□□□ -0.35
CHD1-202ENST00000414220 DNAJC8O75937 253 aaPredicted RBP12.86□□□□□ -0.35
CHD1-202ENST00000414220 UBL3O95164 117 aa12.86□□□□□ -0.35
CHD1-202ENST00000414220 PLAUP00749 431 aa12.86□□□□□ -0.35
CHD1-202ENST00000414220 SEMG1P04279 462 aa12.86□□□□□ -0.35
CHD1-202ENST00000414220 QDPRP09417 244 aa12.86□□□□□ -0.35
CHD1-202ENST00000414220 PGA4P0DJD7 388 aa12.86□□□□□ -0.35
CHD1-202ENST00000414220 PGA3P0DJD8 388 aa12.86□□□□□ -0.35
CHD1-202ENST00000414220 OR8G3PP0DMU2 310 aa12.86□□□□□ -0.35
CHD1-202ENST00000414220 CD53P19397 219 aa12.86□□□□□ -0.35
CHD1-202ENST00000414220 ATP6V1B2P21281 511 aa12.86□□□□□ -0.35
CHD1-202ENST00000414220 ACVR1BP36896 505 aa12.86□□□□□ -0.35
CHD1-202ENST00000414220 GPR4P46093 362 aa12.86□□□□□ -0.35
CHD1-202ENST00000414220 CDH11P55287 796 aa12.86□□□□□ -0.35
CHD1-202ENST00000414220 RPL27P61353 136 aaKnown RBP12.86□□□□□ -0.35
CHD1-202ENST00000414220 RPS4XP62701 263 aaKnown RBP12.86□□□□□ -0.35
CHD1-202ENST00000414220 TOP3AQ13472 1001 aaPredicted RBP12.86□□□□□ -0.35
CHD1-202ENST00000414220 ZNF672Q499Z4 452 aaPredicted RBP12.86□□□□□ -0.35
CHD1-202ENST00000414220 PHYHD1Q5SRE7 291 aa12.86□□□□□ -0.35
CHD1-202ENST00000414220 TSEN54Q7Z6J9 526 aaKnown RBP12.86□□□□□ -0.35
CHD1-202ENST00000414220 DPPA2Q7Z7J5 298 aa12.86□□□□□ -0.35
CHD1-202ENST00000414220 NOXO1Q8NFA2 376 aa12.86□□□□□ -0.35
CHD1-202ENST00000414220 FAM46AQ96IP4 442 aaKnown RBP12.86□□□□□ -0.35
CHD1-202ENST00000414220 DHRS1Q96LJ7 313 aa12.86□□□□□ -0.35
CHD1-202ENST00000414220 SLC38A2Q96QD8 506 aa12.86□□□□□ -0.35
CHD1-202ENST00000414220 ALG12Q9BV10 488 aa12.86□□□□□ -0.35
CHD1-202ENST00000414220 YY1AP1Q9H869 796 aa12.86□□□□□ -0.35
CHD1-202ENST00000414220 NPAP1Q9NZP6 1156 aa12.86□□□□□ -0.35
CHD1-202ENST00000414220 ZNF346Q9UL40 294 aaKnown RBP12.86□□□□□ -0.35
CHD1-202ENST00000414220 TRBV4-1A0A0J9YWV2 114 aa12.85□□□□□ -0.35
CHD1-202ENST00000414220 SH3PXD2BA1X283 911 aa12.85□□□□□ -0.35
CHD1-202ENST00000414220 UNC119BA6NIH7 251 aa12.85□□□□□ -0.35
CHD1-202ENST00000414220 AQP12BA6NM10 295 aa12.85□□□□□ -0.35
CHD1-202ENST00000414220 TNFRSF11BO00300 401 aa12.85□□□□□ -0.35
CHD1-202ENST00000414220 TRMUO75648 421 aaKnown RBP12.85□□□□□ -0.35
CHD1-202ENST00000414220 NDUFB2O95178 105 aa12.85□□□□□ -0.35
CHD1-202ENST00000414220 RAB36O95755 333 aa12.85□□□□□ -0.35
CHD1-202ENST00000414220 IGHMP01871 453 aa12.85□□□□□ -0.35
CHD1-202ENST00000414220 CD79AP11912 226 aa12.85□□□□□ -0.35
CHD1-202ENST00000414220 BMP4P12644 408 aa12.85□□□□□ -0.35
CHD1-202ENST00000414220 CBR1P16152 277 aa12.85□□□□□ -0.35
CHD1-202ENST00000414220 CD47Q08722 323 aa12.85□□□□□ -0.35
CHD1-202ENST00000414220 NRN1LQ496H8 165 aa12.85□□□□□ -0.35
CHD1-202ENST00000414220 THEM4Q5T1C6 240 aa12.85□□□□□ -0.35
CHD1-202ENST00000414220 AGAP6Q5VW22 663 aa12.85□□□□□ -0.35
CHD1-202ENST00000414220 SEZ6L2Q6UXD5 910 aa12.85□□□□□ -0.35
CHD1-202ENST00000414220 ZNF627Q7L945 461 aa12.85□□□□□ -0.35
CHD1-202ENST00000414220 AQP12AQ8IXF9 295 aa12.85□□□□□ -0.35
CHD1-202ENST00000414220 FBXL14Q8N1E6 418 aa12.85□□□□□ -0.35
CHD1-202ENST00000414220 LRRC75A-AS1Q8N1F1 130 aa12.85□□□□□ -0.35
CHD1-202ENST00000414220 SYT14Q8NB59 555 aa12.85□□□□□ -0.35
CHD1-202ENST00000414220 KBTBD8Q8NFY9 601 aa12.85□□□□□ -0.35
CHD1-202ENST00000414220 OR13C2Q8NGS9 318 aa12.85□□□□□ -0.35
CHD1-202ENST00000414220 SMAP2Q8WU79 429 aaPredicted RBP12.85□□□□□ -0.35
CHD1-202ENST00000414220 MCHR2Q969V1 340 aa12.85□□□□□ -0.35
CHD1-202ENST00000414220 KATNB1Q9BVA0 655 aa12.85□□□□□ -0.35
CHD1-202ENST00000414220 REEP1Q9H902 201 aa12.85□□□□□ -0.35
CHD1-202ENST00000414220 SMURF2Q9HAU4 748 aa12.85□□□□□ -0.35
CHD1-202ENST00000414220 ATP23Q9Y6H3 246 aa12.85□□□□□ -0.35
CHD1-202ENST00000414220 CREBBPQ92793 2442 aa12.85□□□□□ -0.35
CHD1-202ENST00000414220 MAST4O15021 2626 aa12.85□□□□□ -0.35
CHD1-202ENST00000414220 FBN2P35556 2912 aa12.85□□□□□ -0.35
CHD1-202ENST00000414220 DCHS2Q6V1P9 2916 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms