RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 SAMD4AQ9UPU9 718 aaKnown RBP16.41■□□□□ 0.22
TRIM56-202ENST00000412507 V9GYQ6 96 aa16.41■□□□□ 0.22
TRIM56-202ENST00000412507 SETD2Q9BYW2 2564 aaPredicted RBP16.41■□□□□ 0.22
TRIM56-202ENST00000412507 A0A087WUU8 490 aa16.4■□□□□ 0.22
TRIM56-202ENST00000412507 MCIDASD6RGH6 385 aa16.4■□□□□ 0.22
TRIM56-202ENST00000412507 CELA3BP08861 270 aa16.4■□□□□ 0.22
TRIM56-202ENST00000412507 CECR9P0C854 216 aa16.4■□□□□ 0.22
TRIM56-202ENST00000412507 PGA4P0DJD7 388 aa16.4■□□□□ 0.22
TRIM56-202ENST00000412507 PGA3P0DJD8 388 aa16.4■□□□□ 0.22
TRIM56-202ENST00000412507 B4GALT1P15291 398 aa16.4■□□□□ 0.22
TRIM56-202ENST00000412507 CBR1P16152 277 aa16.4■□□□□ 0.22
TRIM56-202ENST00000412507 MAKP20794 623 aa16.4■□□□□ 0.22
TRIM56-202ENST00000412507 TTKP33981 857 aa16.4■□□□□ 0.22
TRIM56-202ENST00000412507 FABP6P51161 128 aa16.4■□□□□ 0.22
TRIM56-202ENST00000412507 PRKCDQ05655 676 aa16.4■□□□□ 0.22
TRIM56-202ENST00000412507 FXNQ16595 210 aa16.4■□□□□ 0.22
TRIM56-202ENST00000412507 LRFN4Q6PJG9 635 aa16.4■□□□□ 0.22
TRIM56-202ENST00000412507 TBPL2Q6SJ96 375 aa16.4■□□□□ 0.22
TRIM56-202ENST00000412507 MYPOPQ86VE0 399 aaPredicted RBP16.4■□□□□ 0.22
TRIM56-202ENST00000412507 CCDC197Q8NCU1 140 aa16.4■□□□□ 0.22
TRIM56-202ENST00000412507 ASB10Q8WXI3 467 aa16.4■□□□□ 0.22
TRIM56-202ENST00000412507 ACOT11Q8WXI4 607 aaPredicted RBP16.4■□□□□ 0.22
TRIM56-202ENST00000412507 FOXB1Q99853 325 aa16.4■□□□□ 0.22
TRIM56-202ENST00000412507 DLL4Q9NR61 685 aa16.4■□□□□ 0.22
TRIM56-202ENST00000412507 NDE1Q9NXR1 346 aa16.4■□□□□ 0.22
TRIM56-202ENST00000412507 MAGEL2Q9UJ55 1249 aa16.4■□□□□ 0.22
TRIM56-202ENST00000412507 CR1P17927 2039 aa16.4■□□□□ 0.22
TRIM56-202ENST00000412507 HTR3EA5X5Y0 456 aa16.39■□□□□ 0.21
TRIM56-202ENST00000412507 hCG_2039718K7EN88 272 aa16.39■□□□□ 0.21
TRIM56-202ENST00000412507 IGKV3-15P01624 115 aa16.39■□□□□ 0.21
TRIM56-202ENST00000412507 IGLV1-44P01699 117 aa16.39■□□□□ 0.21
TRIM56-202ENST00000412507 HLA-HP01893 362 aa16.39■□□□□ 0.21
TRIM56-202ENST00000412507 SAGP10523 405 aaPredicted RBP16.39■□□□□ 0.21
TRIM56-202ENST00000412507 IDH3GP51553 393 aaPredicted RBP16.39■□□□□ 0.21
TRIM56-202ENST00000412507 CLRN1P58418 232 aa16.39■□□□□ 0.21
TRIM56-202ENST00000412507 VLDLRP98155 873 aa16.39■□□□□ 0.21
TRIM56-202ENST00000412507 MYBPC1Q00872 1141 aa16.39■□□□□ 0.21
TRIM56-202ENST00000412507 NAAAQ02083 359 aa16.39■□□□□ 0.21
TRIM56-202ENST00000412507 RUNX1T1Q06455 604 aa16.39■□□□□ 0.21
TRIM56-202ENST00000412507 AGAP6Q5VW22 663 aa16.39■□□□□ 0.21
TRIM56-202ENST00000412507 ZNF730Q6ZMV8 503 aa16.39■□□□□ 0.21
TRIM56-202ENST00000412507 ZNF627Q7L945 461 aa16.39■□□□□ 0.21
TRIM56-202ENST00000412507 MDP1Q86V88 176 aa16.39■□□□□ 0.21
TRIM56-202ENST00000412507 CCDC36Q8IYA8 594 aa16.39■□□□□ 0.21
TRIM56-202ENST00000412507 RNF113BQ8IZP6 322 aaKnown RBP16.39■□□□□ 0.21
TRIM56-202ENST00000412507 FBXL14Q8N1E6 418 aa16.39■□□□□ 0.21
TRIM56-202ENST00000412507 TRMT61AQ96FX7 289 aaKnown RBP16.39■□□□□ 0.21
TRIM56-202ENST00000412507 NSL1Q96IY1 281 aa16.39■□□□□ 0.21
TRIM56-202ENST00000412507 C7orf34Q96L11 122 aa16.39■□□□□ 0.21
TRIM56-202ENST00000412507 ZNF347Q96SE7 839 aa16.39■□□□□ 0.21
TRIM56-202ENST00000412507 KCNS3Q9BQ31 491 aa16.39■□□□□ 0.21
TRIM56-202ENST00000412507 NMNAT1Q9HAN9 279 aaPredicted RBP16.39■□□□□ 0.21
TRIM56-202ENST00000412507 MOV10Q9HCE1 1003 aaKnown RBP16.39■□□□□ 0.21
TRIM56-202ENST00000412507 B3GNT2Q9NY97 397 aa16.39■□□□□ 0.21
TRIM56-202ENST00000412507 ADAM21Q9UKJ8 722 aa16.39■□□□□ 0.21
TRIM56-202ENST00000412507 HIF3AQ9Y2N7 669 aa16.39■□□□□ 0.21
TRIM56-202ENST00000412507 FAM32AQ9Y421 112 aaKnown RBP16.39■□□□□ 0.21
TRIM56-202ENST00000412507 B2RBV5 119 aa16.38■□□□□ 0.21
TRIM56-202ENST00000412507 ARPC2O15144 300 aa16.38■□□□□ 0.21
TRIM56-202ENST00000412507 TRMUO75648 421 aaKnown RBP16.38■□□□□ 0.21
TRIM56-202ENST00000412507 DIRAS1O95057 198 aa16.38■□□□□ 0.21
TRIM56-202ENST00000412507 IGHG1P01857 330 aa16.38■□□□□ 0.21
TRIM56-202ENST00000412507 CRYAAP02489 173 aa16.38■□□□□ 0.21
TRIM56-202ENST00000412507 QDPRP09417 244 aa16.38■□□□□ 0.21
TRIM56-202ENST00000412507 CD79AP11912 226 aa16.38■□□□□ 0.21
TRIM56-202ENST00000412507 ARR3P36575 388 aa16.38■□□□□ 0.21
TRIM56-202ENST00000412507 MNAT1P51948 309 aa16.38■□□□□ 0.21
TRIM56-202ENST00000412507 PIGFQ07326 219 aa16.38■□□□□ 0.21
TRIM56-202ENST00000412507 NPRL3Q12980 569 aa16.38■□□□□ 0.21
TRIM56-202ENST00000412507 C3orf36Q3SXR2 165 aa16.38■□□□□ 0.21
TRIM56-202ENST00000412507 ALG10Q5BKT4 473 aa16.38■□□□□ 0.21
TRIM56-202ENST00000412507 ZNF544Q6NX49 715 aa16.38■□□□□ 0.21
TRIM56-202ENST00000412507 MBOAT2Q6ZWT7 520 aa16.38■□□□□ 0.21
TRIM56-202ENST00000412507 MUC15Q8N387 334 aa16.38■□□□□ 0.21
TRIM56-202ENST00000412507 FAM169BQ8N8A8 192 aa16.38■□□□□ 0.21
TRIM56-202ENST00000412507 SYT14Q8NB59 555 aa16.38■□□□□ 0.21
TRIM56-202ENST00000412507 OR51A7Q8NH64 312 aa16.38■□□□□ 0.21
TRIM56-202ENST00000412507 SLC7A13Q8TCU3 470 aa16.38■□□□□ 0.21
TRIM56-202ENST00000412507 KATNB1Q9BVA0 655 aa16.38■□□□□ 0.21
TRIM56-202ENST00000412507 GRIP2Q9C0E4 1043 aa16.38■□□□□ 0.21
TRIM56-202ENST00000412507 NOX3Q9HBY0 568 aa16.38■□□□□ 0.21
TRIM56-202ENST00000412507 CBLN4Q9NTU7 201 aa16.38■□□□□ 0.21
TRIM56-202ENST00000412507 NDUFAF4Q9P032 175 aa16.38■□□□□ 0.21
TRIM56-202ENST00000412507 ZANQ9Y493 2812 aa16.38■□□□□ 0.21
TRIM56-202ENST00000412507 TRAV27A0A087WT01 109 aa16.37■□□□□ 0.21
TRIM56-202ENST00000412507 EFCAB9A8MZ26 197 aa16.37■□□□□ 0.21
TRIM56-202ENST00000412507 DHHO43323 396 aa16.37■□□□□ 0.21
TRIM56-202ENST00000412507 NDUFS7O75251 213 aa16.37■□□□□ 0.21
TRIM56-202ENST00000412507 H1F0P07305 194 aaKnown RBP16.37■□□□□ 0.21
TRIM56-202ENST00000412507 ACADSP16219 412 aa16.37■□□□□ 0.21
TRIM56-202ENST00000412507 RHCEP18577 417 aa16.37■□□□□ 0.21
TRIM56-202ENST00000412507 CALCRP30988 508 aa16.37■□□□□ 0.21
TRIM56-202ENST00000412507 APOBEC3AP31941 199 aaPredicted RBP16.37■□□□□ 0.21
TRIM56-202ENST00000412507 GPR4P46093 362 aa16.37■□□□□ 0.21
TRIM56-202ENST00000412507 DAP3P51398 398 aaKnown RBP16.37■□□□□ 0.21
TRIM56-202ENST00000412507 HIST3H3Q16695 136 aa16.37■□□□□ 0.21
TRIM56-202ENST00000412507 GSG1Q2KHT4 349 aa16.37■□□□□ 0.21
TRIM56-202ENST00000412507 ARMC4Q5T2S8 1044 aa16.37■□□□□ 0.21
TRIM56-202ENST00000412507 C11orf71Q6IPW1 123 aa16.37■□□□□ 0.21
TRIM56-202ENST00000412507 RRM2BQ7LG56 351 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms