RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 MN1Q10571 1320 aaPredicted RBP10.31□□□□□ -0.76
SNX13-202ENST00000409604 TRBV5-3A0A0A0MS03 114 aa10.31□□□□□ -0.76
SNX13-202ENST00000409604 OR6C70A6NIJ9 312 aa10.31□□□□□ -0.76
SNX13-202ENST00000409604 C19orf67A6NJJ6 358 aa10.31□□□□□ -0.76
SNX13-202ENST00000409604 OR6C76A6NM76 312 aa10.31□□□□□ -0.76
SNX13-202ENST00000409604 TBXA2RP21731 343 aa10.31□□□□□ -0.76
SNX13-202ENST00000409604 F8A1P23610 371 aa10.31□□□□□ -0.76
SNX13-202ENST00000409604 MAGEB1P43366 347 aa10.31□□□□□ -0.76
SNX13-202ENST00000409604 MVKQ03426 396 aa10.31□□□□□ -0.76
SNX13-202ENST00000409604 ANKRD16Q6P6B7 361 aa10.31□□□□□ -0.76
SNX13-202ENST00000409604 APOBEC4Q8WW27 367 aaKnown RBP10.31□□□□□ -0.76
SNX13-202ENST00000409604 TRUB1Q8WWH5 349 aaKnown RBP10.31□□□□□ -0.76
SNX13-202ENST00000409604 UCK1Q9HA47 277 aa10.31□□□□□ -0.76
SNX13-202ENST00000409604 CHST11Q9NPF2 352 aa10.31□□□□□ -0.76
SNX13-202ENST00000409604 KLHL9Q9P2J3 617 aa10.31□□□□□ -0.76
SNX13-202ENST00000409604 PLEKHA6Q9Y2H5 1048 aa10.31□□□□□ -0.76
SNX13-202ENST00000409604 TRAV17A0A0B4J275 112 aa10.31□□□□□ -0.76
SNX13-202ENST00000409604 A6NIZ1 184 aa10.31□□□□□ -0.76
SNX13-202ENST00000409604 IMPA2O14732 288 aa10.31□□□□□ -0.76
SNX13-202ENST00000409604 LRRTM2O43300 516 aa10.31□□□□□ -0.76
SNX13-202ENST00000409604 IL2RAP01589 272 aa10.31□□□□□ -0.76
SNX13-202ENST00000409604 CDK1P06493 297 aa10.31□□□□□ -0.76
SNX13-202ENST00000409604 LAP3P28838 519 aa10.31□□□□□ -0.76
SNX13-202ENST00000409604 APLNRP35414 380 aa10.31□□□□□ -0.76
SNX13-202ENST00000409604 RAP1BP61224 184 aa10.31□□□□□ -0.76
SNX13-202ENST00000409604 RAP1AP62834 184 aa10.31□□□□□ -0.76
SNX13-202ENST00000409604 DCDC5Q6ZRR9 648 aa10.31□□□□□ -0.76
SNX13-202ENST00000409604 FAM181AQ8N9Y4 354 aa10.31□□□□□ -0.76
SNX13-202ENST00000409604 AKR7LQ8NHP1 331 aa10.31□□□□□ -0.76
SNX13-202ENST00000409604 RHOXF1Q8NHV9 184 aa10.31□□□□□ -0.76
SNX13-202ENST00000409604 PRR7Q8TB68 274 aa10.31□□□□□ -0.76
SNX13-202ENST00000409604 VOPP1Q96AW1 172 aa10.31□□□□□ -0.76
SNX13-202ENST00000409604 MUCL1Q96DR8 90 aa10.31□□□□□ -0.76
SNX13-202ENST00000409604 ATG5Q9H1Y0 275 aa10.31□□□□□ -0.76
SNX13-202ENST00000409604 SPATA2Q9UM82 520 aa10.31□□□□□ -0.76
SNX13-202ENST00000409604 CORINQ9Y5Q5 1042 aa10.31□□□□□ -0.76
SNX13-202ENST00000409604 KDM4BO94953 1096 aa10.3□□□□□ -0.76
SNX13-202ENST00000409604 PRSS23O95084 383 aa10.3□□□□□ -0.76
SNX13-202ENST00000409604 MVDP53602 400 aa10.3□□□□□ -0.76
SNX13-202ENST00000409604 ISL1P61371 349 aa10.3□□□□□ -0.76
SNX13-202ENST00000409604 RBPJQ06330 500 aa10.3□□□□□ -0.76
SNX13-202ENST00000409604 MRPL49Q13405 166 aaKnown RBP10.3□□□□□ -0.76
SNX13-202ENST00000409604 SNTB1Q13884 538 aaKnown RBP10.3□□□□□ -0.76
SNX13-202ENST00000409604 ALKBH6Q3KRA9 238 aa10.3□□□□□ -0.76
SNX13-202ENST00000409604 ZNF468Q5VIY5 522 aaPredicted RBP10.3□□□□□ -0.76
SNX13-202ENST00000409604 HDDC2Q7Z4H3 204 aa10.3□□□□□ -0.76
SNX13-202ENST00000409604 TTC9Q92623 222 aa10.3□□□□□ -0.76
SNX13-202ENST00000409604 GHSRQ92847 366 aa10.3□□□□□ -0.76
SNX13-202ENST00000409604 GATA6Q92908 595 aa10.3□□□□□ -0.76
SNX13-202ENST00000409604 DHRS1Q96LJ7 313 aa10.3□□□□□ -0.76
SNX13-202ENST00000409604 IP6K3Q96PC2 410 aa10.3□□□□□ -0.76
SNX13-202ENST00000409604 YTHDF1Q9BYJ9 559 aaKnown RBP10.3□□□□□ -0.76
SNX13-202ENST00000409604 ACOT13Q9NPJ3 140 aa10.3□□□□□ -0.76
SNX13-202ENST00000409604 ZNF701Q9NV72 531 aaPredicted RBP10.3□□□□□ -0.76
SNX13-202ENST00000409604 EMC3Q9P0I2 261 aa10.3□□□□□ -0.76
SNX13-202ENST00000409604 KCNG2Q9UJ96 466 aa10.3□□□□□ -0.76
SNX13-202ENST00000409604 BAIAP2Q9UQB8 552 aa10.3□□□□□ -0.76
SNX13-202ENST00000409604 C2orf16Q68DN1 1984 aa10.3□□□□□ -0.76
SNX13-202ENST00000409604 A0A087WUJ7 227 aa10.3□□□□□ -0.76
SNX13-202ENST00000409604 A0A1B0GTH9 108 aa10.3□□□□□ -0.76
SNX13-202ENST00000409604 HSPA12AO43301 675 aa10.3□□□□□ -0.76
SNX13-202ENST00000409604 SSNA1O43805 119 aa10.3□□□□□ -0.76
SNX13-202ENST00000409604 FAM87AP0C7U9 286 aa10.3□□□□□ -0.76
SNX13-202ENST00000409604 SLC2A2P11168 524 aaPredicted RBP10.3□□□□□ -0.76
SNX13-202ENST00000409604 CLDN20P56880 219 aa10.3□□□□□ -0.76
SNX13-202ENST00000409604 RPL27P61353 136 aaKnown RBP10.3□□□□□ -0.76
SNX13-202ENST00000409604 POU4F3Q15319 338 aa10.3□□□□□ -0.76
SNX13-202ENST00000409604 RGS21Q2M5E4 152 aa10.3□□□□□ -0.76
SNX13-202ENST00000409604 GPR139Q6DWJ6 353 aa10.3□□□□□ -0.76
SNX13-202ENST00000409604 ASCL5Q7RTU5 278 aa10.3□□□□□ -0.76
SNX13-202ENST00000409604 WFDC8Q8IUA0 241 aa10.3□□□□□ -0.76
SNX13-202ENST00000409604 POLE3Q9NRF9 147 aa10.3□□□□□ -0.76
SNX13-202ENST00000409604 EIF3KQ9UBQ5 218 aaKnown RBP10.3□□□□□ -0.76
SNX13-202ENST00000409604 EXTL2Q9UBQ6 330 aa10.3□□□□□ -0.76
SNX13-202ENST00000409604 EPG5Q9HCE0 2579 aa10.3□□□□□ -0.76
SNX13-202ENST00000409604 ALG1L2C9J202 215 aa10.3□□□□□ -0.76
SNX13-202ENST00000409604 TFAP2AP05549 437 aa10.3□□□□□ -0.76
SNX13-202ENST00000409604 MSL3P1P0C860 447 aa10.3□□□□□ -0.76
SNX13-202ENST00000409604 BMP4P12644 408 aa10.3□□□□□ -0.76
SNX13-202ENST00000409604 SOX18P35713 384 aa10.3□□□□□ -0.76
SNX13-202ENST00000409604 NFATC3Q12968 1075 aa10.3□□□□□ -0.76
SNX13-202ENST00000409604 SELENBP1Q13228 472 aa10.3□□□□□ -0.76
SNX13-202ENST00000409604 ZNF404Q494X3 552 aa10.3□□□□□ -0.76
SNX13-202ENST00000409604 TMED4Q7Z7H5 227 aa10.3□□□□□ -0.76
SNX13-202ENST00000409604 OR4Q3Q8NH05 313 aa10.3□□□□□ -0.76
SNX13-202ENST00000409604 OR10D3Q8NH80 312 aa10.3□□□□□ -0.76
SNX13-202ENST00000409604 CPT1CQ8TCG5 803 aa10.3□□□□□ -0.76
SNX13-202ENST00000409604 ABHD3Q8WU67 409 aa10.3□□□□□ -0.76
SNX13-202ENST00000409604 SLC25A44Q96H78 314 aaPredicted RBP10.3□□□□□ -0.76
SNX13-202ENST00000409604 GPA33Q99795 319 aa10.3□□□□□ -0.76
SNX13-202ENST00000409604 ACOXLQ9NUZ1 547 aa10.3□□□□□ -0.76
SNX13-202ENST00000409604 KCNE5Q9UJ90 142 aa10.3□□□□□ -0.76
SNX13-202ENST00000409604 CNOT11Q9UKZ1 510 aaKnown RBP10.3□□□□□ -0.76
SNX13-202ENST00000409604 HTR3EA5X5Y0 456 aa10.29□□□□□ -0.76
SNX13-202ENST00000409604 C9orf172C9J069 976 aa10.29□□□□□ -0.76
SNX13-202ENST00000409604 CDX4O14627 284 aaPredicted RBP10.29□□□□□ -0.76
SNX13-202ENST00000409604 ATXN7O15265 892 aaPredicted RBP10.29□□□□□ -0.76
SNX13-202ENST00000409604 ZNF208O43345 1280 aa10.29□□□□□ -0.76
SNX13-202ENST00000409604 MPIG6BO95866 241 aa10.29□□□□□ -0.76
SNX13-202ENST00000409604 HLA-DOBP13765 273 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms