RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 ZAR1LA6NP61 321 aa29.43■■■□□ 2.3
CSNK1E-204ENST00000403904 XKRYO14609 159 aa29.43■■■□□ 2.3
CSNK1E-204ENST00000403904 DVL2O14641 736 aa29.43■■■□□ 2.3
CSNK1E-204ENST00000403904 IMPA2O14732 288 aa29.43■■■□□ 2.3
CSNK1E-204ENST00000403904 PGA4P0DJD7 388 aa29.43■■■□□ 2.3
CSNK1E-204ENST00000403904 PGA3P0DJD8 388 aa29.43■■■□□ 2.3
CSNK1E-204ENST00000403904 TSPO2Q5TGU0 170 aa29.43■■■□□ 2.3
CSNK1E-204ENST00000403904 HDDC2Q7Z4H3 204 aa29.43■■■□□ 2.3
CSNK1E-204ENST00000403904 OR4K13Q8NH42 304 aa29.43■■■□□ 2.3
CSNK1E-204ENST00000403904 SLCO5A1Q9H2Y9 848 aa29.43■■■□□ 2.3
CSNK1E-204ENST00000403904 A6NIZ1 184 aa29.43■■■□□ 2.3
CSNK1E-204ENST00000403904 H7C1C5 153 aa29.43■■■□□ 2.3
CSNK1E-204ENST00000403904 IGHG1P01857 330 aa29.43■■■□□ 2.3
CSNK1E-204ENST00000403904 CHRNB4P30926 498 aa29.43■■■□□ 2.3
CSNK1E-204ENST00000403904 RAP1BP61224 184 aa29.43■■■□□ 2.3
CSNK1E-204ENST00000403904 LCN6P62502 163 aa29.43■■■□□ 2.3
CSNK1E-204ENST00000403904 RAP1AP62834 184 aa29.43■■■□□ 2.3
CSNK1E-204ENST00000403904 FAM205BPQ63HN1 556 aa29.43■■■□□ 2.3
CSNK1E-204ENST00000403904 PTCHD4Q6ZW05 846 aa29.43■■■□□ 2.3
CSNK1E-204ENST00000403904 MRPL13Q9BYD1 178 aaKnown RBP29.43■■■□□ 2.3
CSNK1E-204ENST00000403904 GRIP2Q9C0E4 1043 aa29.43■■■□□ 2.3
CSNK1E-204ENST00000403904 ZG16O60844 167 aa29.42■■■□□ 2.3
CSNK1E-204ENST00000403904 UPK3AO75631 287 aa29.42■■■□□ 2.3
CSNK1E-204ENST00000403904 CD8BP10966 210 aa29.42■■■□□ 2.3
CSNK1E-204ENST00000403904 CDKN2AP42771 156 aaKnown RBP29.42■■■□□ 2.3
CSNK1E-204ENST00000403904 CLRN1P58418 232 aa29.42■■■□□ 2.3
CSNK1E-204ENST00000403904 UBE2J2Q8N2K1 259 aa29.42■■■□□ 2.3
CSNK1E-204ENST00000403904 ZNF610Q8N9Z0 462 aa29.42■■■□□ 2.3
CSNK1E-204ENST00000403904 RELL2Q8NC24 303 aaPredicted RBP29.42■■■□□ 2.3
CSNK1E-204ENST00000403904 OR52E2Q8NGJ4 325 aa29.42■■■□□ 2.3
CSNK1E-204ENST00000403904 OR6N1Q8NGY5 312 aa29.42■■■□□ 2.3
CSNK1E-204ENST00000403904 RDH12Q96NR8 316 aa29.42■■■□□ 2.3
CSNK1E-204ENST00000403904 KCNK17Q96T54 332 aa29.42■■■□□ 2.3
CSNK1E-204ENST00000403904 VCX3BQ9H321 246 aa29.42■■■□□ 2.3
CSNK1E-204ENST00000403904 SLC7A10Q9NS82 523 aa29.42■■■□□ 2.3
CSNK1E-204ENST00000403904 SLC2A10O95528 541 aa29.41■■■□□ 2.3
CSNK1E-204ENST00000403904 GRK5P34947 590 aa29.41■■■□□ 2.3
CSNK1E-204ENST00000403904 PHYHD1Q5SRE7 291 aa29.41■■■□□ 2.3
CSNK1E-204ENST00000403904 LUZP2Q86TE4 346 aa29.41■■■□□ 2.3
CSNK1E-204ENST00000403904 C20orf196Q8IYI0 205 aa29.41■■■□□ 2.3
CSNK1E-204ENST00000403904 FOXD3Q9UJU5 478 aaPredicted RBP29.41■■■□□ 2.3
CSNK1E-204ENST00000403904 EEF1E1-BLOC1S5C9J1V9 151 aa29.4■■■□□ 2.3
CSNK1E-204ENST00000403904 J3QKU1 62 aa29.4■■■□□ 2.3
CSNK1E-204ENST00000403904 EEF1E1O43324 174 aaKnown RBP29.4■■■□□ 2.3
CSNK1E-204ENST00000403904 CSNK1A1P48729 337 aa29.4■■■□□ 2.3
CSNK1E-204ENST00000403904 ZNF362Q5T0B9 420 aaPredicted RBP29.4■■■□□ 2.3
CSNK1E-204ENST00000403904 SLX4IPQ5VYV7 408 aa29.4■■■□□ 2.3
CSNK1E-204ENST00000403904 JAZF1Q86VZ6 243 aa29.4■■■□□ 2.3
CSNK1E-204ENST00000403904 SDR9C7Q8NEX9 313 aa29.4■■■□□ 2.3
CSNK1E-204ENST00000403904 NOXO1Q8NFA2 376 aa29.4■■■□□ 2.3
CSNK1E-204ENST00000403904 ASB5Q8WWX0 329 aa29.4■■■□□ 2.3
CSNK1E-204ENST00000403904 NMNAT3Q96T66 252 aa29.4■■■□□ 2.3
CSNK1E-204ENST00000403904 PIGMQ9H3S5 423 aa29.4■■■□□ 2.3
CSNK1E-204ENST00000403904 M0R3G1 203 aa29.39■■■□□ 2.3
CSNK1E-204ENST00000403904 KHDRBS1Q07666 443 aaKnown RBP eCLIP29.39■■■□□ 2.3
CSNK1E-204ENST00000403904 CD47Q08722 323 aa29.39■■■□□ 2.3
CSNK1E-204ENST00000403904 LEG1Q6P5S2 330 aa29.39■■■□□ 2.3
CSNK1E-204ENST00000403904 TMEM54Q969K7 222 aa29.39■■■□□ 2.3
CSNK1E-204ENST00000403904 LRR1Q96L50 414 aa29.39■■■□□ 2.3
CSNK1E-204ENST00000403904 ALKBH3Q96Q83 286 aaPredicted RBP29.39■■■□□ 2.3
CSNK1E-204ENST00000403904 TEX12Q9BXU0 123 aa29.39■■■□□ 2.3
CSNK1E-204ENST00000403904 FAM118AQ9NWS6 357 aa29.39■■■□□ 2.3
CSNK1E-204ENST00000403904 TVP23BQ9NYZ1 205 aa29.39■■■□□ 2.3
CSNK1E-204ENST00000403904 GLTPQ9NZD2 209 aa29.39■■■□□ 2.3
CSNK1E-204ENST00000403904 UPB1Q9UBR1 384 aa29.39■■■□□ 2.3
CSNK1E-204ENST00000403904 PRSS37A4D1T9 235 aa29.39■■■□□ 2.29
CSNK1E-204ENST00000403904 KRT33AO76009 404 aa29.39■■■□□ 2.29
CSNK1E-204ENST00000403904 AQP4P55087 323 aa29.39■■■□□ 2.29
CSNK1E-204ENST00000403904 CDSNQ15517 529 aa29.39■■■□□ 2.29
CSNK1E-204ENST00000403904 SNCBQ16143 134 aa29.39■■■□□ 2.29
CSNK1E-204ENST00000403904 FBXW9Q5XUX1 488 aa29.39■■■□□ 2.29
CSNK1E-204ENST00000403904 MRGPRGQ86SM5 289 aa29.39■■■□□ 2.29
CSNK1E-204ENST00000403904 ADCK1Q86TW2 530 aa29.39■■■□□ 2.29
CSNK1E-204ENST00000403904 GPR137CQ8N3F9 429 aa29.39■■■□□ 2.29
CSNK1E-204ENST00000403904 POMGNT2Q8NAT1 580 aa29.39■■■□□ 2.29
CSNK1E-204ENST00000403904 CMC2Q9NRP2 79 aa29.39■■■□□ 2.29
CSNK1E-204ENST00000403904 OR6C65A6NJZ3 312 aa29.38■■■□□ 2.29
CSNK1E-204ENST00000403904 SURF4O15260 269 aa29.38■■■□□ 2.29
CSNK1E-204ENST00000403904 HMGN1P05114 100 aa29.38■■■□□ 2.29
CSNK1E-204ENST00000403904 HIST3H3Q16695 136 aa29.38■■■□□ 2.29
CSNK1E-204ENST00000403904 LINGO2Q7L985 606 aa29.38■■■□□ 2.29
CSNK1E-204ENST00000403904 ALG12Q9BV10 488 aa29.38■■■□□ 2.29
CSNK1E-204ENST00000403904 LINC00470Q9BZP3 86 aa29.38■■■□□ 2.29
CSNK1E-204ENST00000403904 SLC22A23A1A5C7 686 aa29.37■■■□□ 2.29
CSNK1E-204ENST00000403904 CENPBD1B2RD01 187 aa29.37■■■□□ 2.29
CSNK1E-204ENST00000403904 E9PQ18 207 aa29.37■■■□□ 2.29
CSNK1E-204ENST00000403904 MSTNO14793 375 aa29.37■■■□□ 2.29
CSNK1E-204ENST00000403904 VHLP40337 213 aa29.37■■■□□ 2.29
CSNK1E-204ENST00000403904 FMODQ06828 376 aa29.37■■■□□ 2.29
CSNK1E-204ENST00000403904 FAPQ12884 760 aa29.37■■■□□ 2.29
CSNK1E-204ENST00000403904 SNAPC1Q16533 368 aa29.37■■■□□ 2.29
CSNK1E-204ENST00000403904 C12orf73Q69YU5 71 aa29.37■■■□□ 2.29
CSNK1E-204ENST00000403904 CYB561A3Q8NBI2 242 aa29.37■■■□□ 2.29
CSNK1E-204ENST00000403904 NPEPL1Q8NDH3 523 aa29.37■■■□□ 2.29
CSNK1E-204ENST00000403904 CA5BP1Q8WTZ4 195 aa29.37■■■□□ 2.29
CSNK1E-204ENST00000403904 HRASLS5Q96KN8 279 aa29.37■■■□□ 2.29
CSNK1E-204ENST00000403904 MALT1Q9UDY8 824 aa29.37■■■□□ 2.29
CSNK1E-204ENST00000403904 KLHL21Q9UJP4 597 aa29.37■■■□□ 2.29
CSNK1E-204ENST00000403904 LOC100130705A0A1B0GUX0 176 aa29.36■■■□□ 2.29
CSNK1E-204ENST00000403904 RIIAD1A6NNX1 92 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms