RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 FGF20Q9NP95 211 aaPredicted RBP2.62□□□□□ -1.99
HMGB1P17-201ENST00000403495 DDX18Q9NVP1 670 aaKnown RBP2.62□□□□□ -1.99
HMGB1P17-201ENST00000403495 RAB20Q9NX57 234 aa2.62□□□□□ -1.99
HMGB1P17-201ENST00000403495 XCL2Q9UBD3 114 aa2.62□□□□□ -1.99
HMGB1P17-201ENST00000403495 ZNF225Q9UK10 706 aa2.62□□□□□ -1.99
HMGB1P17-201ENST00000403495 PITPNC1Q9UKF7 332 aa2.62□□□□□ -1.99
HMGB1P17-201ENST00000403495 NUP50Q9UKX7 468 aa2.62□□□□□ -1.99
HMGB1P17-201ENST00000403495 TP53TG5Q9Y2B4 290 aa2.62□□□□□ -1.99
HMGB1P17-201ENST00000403495 A6NDX4 124 aa2.61□□□□□ -1.99
HMGB1P17-201ENST00000403495 ZNF726A6NNF4 738 aa2.61□□□□□ -1.99
HMGB1P17-201ENST00000403495 A8MU10 97 aa2.61□□□□□ -1.99
HMGB1P17-201ENST00000403495 TEX46H3BTG2 121 aa2.61□□□□□ -1.99
HMGB1P17-201ENST00000403495 RAB29O14966 203 aa2.61□□□□□ -1.99
HMGB1P17-201ENST00000403495 DNAJB6O75190 326 aa2.61□□□□□ -1.99
HMGB1P17-201ENST00000403495 OR2J3O76001 311 aa2.61□□□□□ -1.99
HMGB1P17-201ENST00000403495 IGHV4-34P06331 123 aa2.61□□□□□ -1.99
HMGB1P17-201ENST00000403495 C2P06681 752 aa2.61□□□□□ -1.99
HMGB1P17-201ENST00000403495 TROVE2P10155 538 aaKnown RBP eCLIP2.61□□□□□ -1.99
HMGB1P17-201ENST00000403495 CCR6P51684 374 aa2.61□□□□□ -1.99
HMGB1P17-201ENST00000403495 NCBP2P52298 156 aaKnown RBP eCLIP2.61□□□□□ -1.99
HMGB1P17-201ENST00000403495 YWHAGP61981 247 aaKnown RBP eCLIP2.61□□□□□ -1.99
HMGB1P17-201ENST00000403495 MRPS22P82650 360 aaKnown RBP2.61□□□□□ -1.99
HMGB1P17-201ENST00000403495 AQP6Q13520 282 aa2.61□□□□□ -1.99
HMGB1P17-201ENST00000403495 GUCA2BQ16661 112 aa2.61□□□□□ -1.99
HMGB1P17-201ENST00000403495 CARD17Q5XLA6 110 aa2.61□□□□□ -1.99
HMGB1P17-201ENST00000403495 GTPBP8Q8N3Z3 284 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P17-201ENST00000403495 FAM71E2Q8N5Q1 922 aa2.61□□□□□ -1.99
HMGB1P17-201ENST00000403495 Q8N9W7 124 aa2.61□□□□□ -1.99
HMGB1P17-201ENST00000403495 SPATA4Q8NEY3 305 aa2.61□□□□□ -1.99
HMGB1P17-201ENST00000403495 CCDC148Q8NFR7 591 aa2.61□□□□□ -1.99
HMGB1P17-201ENST00000403495 SLC7A13Q8TCU3 470 aa2.61□□□□□ -1.99
HMGB1P17-201ENST00000403495 DTX3LQ8TDB6 740 aa2.61□□□□□ -1.99
HMGB1P17-201ENST00000403495 ELMO1Q92556 727 aa2.61□□□□□ -1.99
HMGB1P17-201ENST00000403495 TMEM54Q969K7 222 aa2.61□□□□□ -1.99
HMGB1P17-201ENST00000403495 NRIP2Q9BQI9 281 aa2.61□□□□□ -1.99
HMGB1P17-201ENST00000403495 GABARAPL3Q9BY60 117 aa2.61□□□□□ -1.99
HMGB1P17-201ENST00000403495 SLC25A37Q9NYZ2 338 aa2.61□□□□□ -1.99
HMGB1P17-201ENST00000403495 F11RQ9Y624 299 aaKnown RBP2.61□□□□□ -1.99
HMGB1P17-201ENST00000403495 CACNG2Q9Y698 323 aa2.61□□□□□ -1.99
HMGB1P17-201ENST00000403495 A0A1B0GVI7 797 aa2.6□□□□□ -1.99
HMGB1P17-201ENST00000403495 HIDE1A8MVS5 230 aa2.6□□□□□ -1.99
HMGB1P17-201ENST00000403495 CLOCKO15516 846 aa2.6□□□□□ -1.99
HMGB1P17-201ENST00000403495 MGRN1O60291 552 aa2.6□□□□□ -1.99
HMGB1P17-201ENST00000403495 WBP4O75554 376 aaKnown RBP2.6□□□□□ -1.99
HMGB1P17-201ENST00000403495 AGTP01019 485 aa2.6□□□□□ -1.99
HMGB1P17-201ENST00000403495 GALP22466 123 aa2.6□□□□□ -1.99
HMGB1P17-201ENST00000403495 CMA1P23946 247 aa2.6□□□□□ -1.99
HMGB1P17-201ENST00000403495 NSG1P42857 185 aa2.6□□□□□ -1.99
HMGB1P17-201ENST00000403495 RFX3P48380 749 aa2.6□□□□□ -1.99
HMGB1P17-201ENST00000403495 TMED10P49755 219 aaKnown RBP2.6□□□□□ -1.99
HMGB1P17-201ENST00000403495 CCNHP51946 323 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P17-201ENST00000403495 CRISP3P54108 245 aa2.6□□□□□ -1.99
HMGB1P17-201ENST00000403495 ZNF92Q03936 586 aa2.6□□□□□ -1.99
HMGB1P17-201ENST00000403495 KCTD19Q17RG1 926 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P17-201ENST00000403495 RFX4Q33E94 735 aa2.6□□□□□ -1.99
HMGB1P17-201ENST00000403495 ZBED5Q49AG3 693 aa2.6□□□□□ -1.99
HMGB1P17-201ENST00000403495 LCE3EQ5T5B0 92 aa2.6□□□□□ -1.99
HMGB1P17-201ENST00000403495 FRMPD2BQ6IN97 320 aa2.6□□□□□ -1.99
HMGB1P17-201ENST00000403495 ANKRD26P1Q6NSI1 321 aa2.6□□□□□ -1.99
HMGB1P17-201ENST00000403495 COX15Q7KZN9 410 aa2.6□□□□□ -1.99
HMGB1P17-201ENST00000403495 ZNF433Q8N7K0 673 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P17-201ENST00000403495 ZFP41Q8N8Y5 198 aa2.6□□□□□ -1.99
HMGB1P17-201ENST00000403495 CCDC54Q8NEL0 328 aa2.6□□□□□ -1.99
HMGB1P17-201ENST00000403495 VN1R2Q8NFZ6 395 aa2.6□□□□□ -1.99
HMGB1P17-201ENST00000403495 NPBQ8NG41 125 aa2.6□□□□□ -1.99
HMGB1P17-201ENST00000403495 AGR3Q8TD06 166 aa2.6□□□□□ -1.99
HMGB1P17-201ENST00000403495 ELSPBP1Q96BH3 223 aa2.6□□□□□ -1.99
HMGB1P17-201ENST00000403495 CCDC126Q96EE4 140 aa2.6□□□□□ -1.99
HMGB1P17-201ENST00000403495 RNF185Q96GF1 192 aa2.6□□□□□ -1.99
HMGB1P17-201ENST00000403495 PKNOX2Q96KN3 472 aa2.6□□□□□ -1.99
HMGB1P17-201ENST00000403495 OR5B12Q96R08 314 aa2.6□□□□□ -1.99
HMGB1P17-201ENST00000403495 SH3GL1Q99961 368 aa2.6□□□□□ -1.99
HMGB1P17-201ENST00000403495 DNTTIP1Q9H147 329 aa2.6□□□□□ -1.99
HMGB1P17-201ENST00000403495 OR51M1Q9H341 326 aa2.6□□□□□ -1.99
HMGB1P17-201ENST00000403495 ZNF160Q9HCG1 818 aa2.6□□□□□ -1.99
HMGB1P17-201ENST00000403495 ZNF331Q9NQX6 463 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P17-201ENST00000403495 GLRX2Q9NS18 164 aa2.6□□□□□ -1.99
HMGB1P17-201ENST00000403495 KIAA1257Q9ULG3 409 aa2.6□□□□□ -1.99
HMGB1P17-201ENST00000403495 VANGL2Q9ULK5 521 aa2.6□□□□□ -1.99
HMGB1P17-201ENST00000403495 PACSIN2Q9UNF0 486 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P17-201ENST00000403495 WDR19Q8NEZ3 1342 aa2.6□□□□□ -1.99
HMGB1P17-201ENST00000403495 FANCIQ9NVI1 1328 aa2.6□□□□□ -1.99
HMGB1P17-201ENST00000403495 NINLQ9Y2I6 1382 aa2.6□□□□□ -1.99
HMGB1P17-201ENST00000403495 MEGF6O75095 1541 aa2.59□□□□□ -1.99
HMGB1P17-201ENST00000403495 A0A075B6Q4 140 aa2.59□□□□□ -1.99
HMGB1P17-201ENST00000403495 SMCO3A2RU48 225 aa2.59□□□□□ -1.99
HMGB1P17-201ENST00000403495 CCDC182A6NF36 153 aa2.59□□□□□ -1.99
HMGB1P17-201ENST00000403495 SOX15O60248 233 aa2.59□□□□□ -1.99
HMGB1P17-201ENST00000403495 SUPT3HO75486 399 aa2.59□□□□□ -1.99
HMGB1P17-201ENST00000403495 FTH1P02794 183 aa2.59□□□□□ -1.99
HMGB1P17-201ENST00000403495 ASGR1P07306 291 aa2.59□□□□□ -1.99
HMGB1P17-201ENST00000403495 ZNF24P17028 368 aa2.59□□□□□ -1.99
HMGB1P17-201ENST00000403495 NOVP48745 357 aa2.59□□□□□ -1.99
HMGB1P17-201ENST00000403495 ZNF133P52736 654 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P17-201ENST00000403495 WNT4P56705 351 aa2.59□□□□□ -1.99
HMGB1P17-201ENST00000403495 RPS21P63220 83 aaKnown RBP2.59□□□□□ -1.99
HMGB1P17-201ENST00000403495 ECH1Q13011 328 aa2.59□□□□□ -1.99
HMGB1P17-201ENST00000403495 CHRNA6Q15825 494 aa2.59□□□□□ -1.99
HMGB1P17-201ENST00000403495 SGCAQ16586 387 aa2.59□□□□□ -1.99
HMGB1P17-201ENST00000403495 ZSCAN26Q16670 478 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms