RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 BCL10O95999 233 aa11.34□□□□□ -0.59
TRIM39-204ENST00000396548 RENP00797 406 aa11.34□□□□□ -0.59
TRIM39-204ENST00000396548 PSKH1P11801 424 aa11.34□□□□□ -0.59
TRIM39-204ENST00000396548 ZNF708P17019 499 aa11.34□□□□□ -0.59
TRIM39-204ENST00000396548 PSMB9P28065 219 aa11.34□□□□□ -0.59
TRIM39-204ENST00000396548 PYCR1P32322 319 aa11.34□□□□□ -0.59
TRIM39-204ENST00000396548 RAP1BP61224 184 aa11.34□□□□□ -0.59
TRIM39-204ENST00000396548 RAP1AP62834 184 aa11.34□□□□□ -0.59
TRIM39-204ENST00000396548 PPIAP62937 165 aaKnown RBP11.34□□□□□ -0.59
TRIM39-204ENST00000396548 CSNK2A1P68400 391 aaPredicted RBP11.34□□□□□ -0.59
TRIM39-204ENST00000396548 GALEQ14376 348 aa11.34□□□□□ -0.59
TRIM39-204ENST00000396548 PON3Q15166 354 aa11.34□□□□□ -0.59
TRIM39-204ENST00000396548 OR2G6Q5TZ20 316 aa11.34□□□□□ -0.59
TRIM39-204ENST00000396548 LHFPL3Q86UP9 236 aa11.34□□□□□ -0.59
TRIM39-204ENST00000396548 RFLNBQ8N5W9 214 aa11.34□□□□□ -0.59
TRIM39-204ENST00000396548 OR52N1Q8NH53 320 aa11.34□□□□□ -0.59
TRIM39-204ENST00000396548 UCN2Q96RP3 112 aa11.34□□□□□ -0.59
TRIM39-204ENST00000396548 MGLLQ99685 303 aa11.34□□□□□ -0.59
TRIM39-204ENST00000396548 PTPRZ1P23471 2315 aaPredicted RBP11.34□□□□□ -0.59
TRIM39-204ENST00000396548 MED12Q93074 2177 aa11.34□□□□□ -0.59
TRIM39-204ENST00000396548 WNT4P56705 351 aa11.34□□□□□ -0.59
TRIM39-204ENST00000396548 LGALS3BPQ08380 585 aa11.34□□□□□ -0.59
TRIM39-204ENST00000396548 SLC17A1Q14916 467 aa11.34□□□□□ -0.59
TRIM39-204ENST00000396548 LCN1P1Q5VSP4 162 aa11.34□□□□□ -0.59
TRIM39-204ENST00000396548 SSX6Q7RTT6 188 aa11.34□□□□□ -0.59
TRIM39-204ENST00000396548 ALDH16A1Q8IZ83 802 aa11.34□□□□□ -0.59
TRIM39-204ENST00000396548 FAM109AQ8N4B1 249 aa11.34□□□□□ -0.59
TRIM39-204ENST00000396548 ZIC4Q8N9L1 334 aa11.34□□□□□ -0.59
TRIM39-204ENST00000396548 A0A1W2PQL4 384 aaPredicted RBP11.34□□□□□ -0.59
TRIM39-204ENST00000396548 C12orf71A8MTZ7 269 aa11.34□□□□□ -0.59
TRIM39-204ENST00000396548 GABARAPO95166 117 aa11.34□□□□□ -0.59
TRIM39-204ENST00000396548 MRPL3P09001 348 aaKnown RBP11.34□□□□□ -0.59
TRIM39-204ENST00000396548 PGA4P0DJD7 388 aa11.34□□□□□ -0.59
TRIM39-204ENST00000396548 PGA3P0DJD8 388 aa11.34□□□□□ -0.59
TRIM39-204ENST00000396548 RGS6P49758 472 aa11.34□□□□□ -0.59
TRIM39-204ENST00000396548 ARMCX4Q5H9R4 360 aa11.34□□□□□ -0.59
TRIM39-204ENST00000396548 ZNF684Q5T5D7 378 aa11.34□□□□□ -0.59
TRIM39-204ENST00000396548 ABLIM2Q6H8Q1 611 aa11.34□□□□□ -0.59
TRIM39-204ENST00000396548 CREB3L2Q70SY1 520 aa11.34□□□□□ -0.59
TRIM39-204ENST00000396548 UEVLDQ8IX04 471 aa11.34□□□□□ -0.59
TRIM39-204ENST00000396548 ACBD7Q8N6N7 88 aa11.34□□□□□ -0.59
TRIM39-204ENST00000396548 OR2T4Q8NH00 348 aa11.34□□□□□ -0.59
TRIM39-204ENST00000396548 OR6X1Q8NH79 312 aa11.34□□□□□ -0.59
TRIM39-204ENST00000396548 OR2V1Q8NHB1 315 aa11.34□□□□□ -0.59
TRIM39-204ENST00000396548 C12orf43Q96C57 262 aaKnown RBP11.34□□□□□ -0.59
TRIM39-204ENST00000396548 CNN2Q99439 309 aaKnown RBP11.34□□□□□ -0.59
TRIM39-204ENST00000396548 SLC6A15Q9H2J7 730 aa11.34□□□□□ -0.59
TRIM39-204ENST00000396548 SRA1Q9HD15 236 aaKnown RBP11.34□□□□□ -0.59
TRIM39-204ENST00000396548 ZMIZ1Q9ULJ6 1067 aa11.34□□□□□ -0.59
TRIM39-204ENST00000396548 LIPGQ9Y5X9 500 aa11.34□□□□□ -0.59
TRIM39-204ENST00000396548 IGKV1D-43A0A0B4J1Z2 117 aa11.33□□□□□ -0.6
TRIM39-204ENST00000396548 NPIPA5E9PKD4 350 aa11.33□□□□□ -0.6
TRIM39-204ENST00000396548 SELENOFO60613 162 aa11.33□□□□□ -0.6
TRIM39-204ENST00000396548 SERPINI2O75830 405 aa11.33□□□□□ -0.6
TRIM39-204ENST00000396548 LALBAP00709 142 aa11.33□□□□□ -0.6
TRIM39-204ENST00000396548 PDGFAP04085 211 aa11.33□□□□□ -0.6
TRIM39-204ENST00000396548 CTLA4P16410 223 aa11.33□□□□□ -0.6
TRIM39-204ENST00000396548 MYL12AP19105 171 aa11.33□□□□□ -0.6
TRIM39-204ENST00000396548 HCCSP53701 268 aa11.33□□□□□ -0.6
TRIM39-204ENST00000396548 RPS7P62081 194 aaKnown RBP11.33□□□□□ -0.6
TRIM39-204ENST00000396548 MLLT11Q13015 90 aaPredicted RBP11.33□□□□□ -0.6
TRIM39-204ENST00000396548 MED22Q15528 200 aa11.33□□□□□ -0.6
TRIM39-204ENST00000396548 BCL2A1Q16548 175 aa11.33□□□□□ -0.6
TRIM39-204ENST00000396548 HBMQ6B0K9 141 aa11.33□□□□□ -0.6
TRIM39-204ENST00000396548 ZNF322Q6U7Q0 402 aaPredicted RBP11.33□□□□□ -0.6
TRIM39-204ENST00000396548 ISG20L2Q9H9L3 353 aaKnown RBP11.33□□□□□ -0.6
TRIM39-204ENST00000396548 ING1Q9UK53 422 aaPredicted RBP11.33□□□□□ -0.6
TRIM39-204ENST00000396548 NPIPA1Q9UND3 350 aa11.33□□□□□ -0.6
TRIM39-204ENST00000396548 CAB39Q9Y376 341 aaPredicted RBP11.33□□□□□ -0.6
TRIM39-204ENST00000396548 IGHV3-15A0A0B4J1V0 119 aa11.33□□□□□ -0.6
TRIM39-204ENST00000396548 ZNF716A6NP11 495 aa11.33□□□□□ -0.6
TRIM39-204ENST00000396548 FAM171A2A8MVW0 826 aa11.33□□□□□ -0.6
TRIM39-204ENST00000396548 XKRYO14609 159 aa11.33□□□□□ -0.6
TRIM39-204ENST00000396548 ATE1O95260 518 aa11.33□□□□□ -0.6
TRIM39-204ENST00000396548 OR2T7P0C7T2 308 aa11.33□□□□□ -0.6
TRIM39-204ENST00000396548 CPEP16870 476 aa11.33□□□□□ -0.6
TRIM39-204ENST00000396548 POU3F2P20265 443 aaPredicted RBP11.33□□□□□ -0.6
TRIM39-204ENST00000396548 ENPP1P22413 925 aa11.33□□□□□ -0.6
TRIM39-204ENST00000396548 BIDP55957 195 aa11.33□□□□□ -0.6
TRIM39-204ENST00000396548 CARD18P57730 90 aa11.33□□□□□ -0.6
TRIM39-204ENST00000396548 SLC22A16Q86VW1 577 aa11.33□□□□□ -0.6
TRIM39-204ENST00000396548 OR2T27Q8NH04 317 aa11.33□□□□□ -0.6
TRIM39-204ENST00000396548 OR10D3Q8NH80 312 aa11.33□□□□□ -0.6
TRIM39-204ENST00000396548 RNF166Q96A37 237 aaPredicted RBP11.33□□□□□ -0.6
TRIM39-204ENST00000396548 BCL7BQ9BQE9 202 aa11.33□□□□□ -0.6
TRIM39-204ENST00000396548 SF3B5Q9BWJ5 86 aaKnown RBP11.33□□□□□ -0.6
TRIM39-204ENST00000396548 COPS3Q9UNS2 423 aa11.33□□□□□ -0.6
TRIM39-204ENST00000396548 EIF1AYO14602 144 aaKnown RBP11.32□□□□□ -0.6
TRIM39-204ENST00000396548 VAMP5O95183 116 aa11.32□□□□□ -0.6
TRIM39-204ENST00000396548 ITGB2P05107 769 aa11.32□□□□□ -0.6
TRIM39-204ENST00000396548 ZNF133P52736 654 aaPredicted RBP11.32□□□□□ -0.6
TRIM39-204ENST00000396548 PLGLB1Q02325 96 aa11.32□□□□□ -0.6
TRIM39-204ENST00000396548 AQP6Q13520 282 aa11.32□□□□□ -0.6
TRIM39-204ENST00000396548 ETFDHQ16134 617 aa11.32□□□□□ -0.6
TRIM39-204ENST00000396548 VASNQ6EMK4 673 aa11.32□□□□□ -0.6
TRIM39-204ENST00000396548 SLC16A9Q7RTY1 509 aa11.32□□□□□ -0.6
TRIM39-204ENST00000396548 CDC20BQ86Y33 519 aa11.32□□□□□ -0.6
TRIM39-204ENST00000396548 ZNF511Q8NB15 262 aa11.32□□□□□ -0.6
TRIM39-204ENST00000396548 GATAD2BQ8WXI9 593 aa11.32□□□□□ -0.6
TRIM39-204ENST00000396548 NAA11Q9BSU3 229 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms