RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 PRPS1P60891 318 aa17.46■□□□□ 0.39
SNCA-203ENST00000394986 MYBPC1Q00872 1141 aa17.46■□□□□ 0.39
SNCA-203ENST00000394986 ANKDD1AQ495B1 522 aa17.46■□□□□ 0.39
SNCA-203ENST00000394986 CLDN22Q8N7P3 220 aa17.46■□□□□ 0.39
SNCA-203ENST00000394986 C1orf162Q8NEQ5 155 aaPredicted RBP17.46■□□□□ 0.39
SNCA-203ENST00000394986 NOXO1Q8NFA2 376 aa17.46■□□□□ 0.39
SNCA-203ENST00000394986 HDAC2Q92769 488 aaKnown RBP17.46■□□□□ 0.39
SNCA-203ENST00000394986 B3GAT2Q9NPZ5 323 aa17.46■□□□□ 0.39
SNCA-203ENST00000394986 SLC17A5Q9NRA2 495 aa17.46■□□□□ 0.39
SNCA-203ENST00000394986 CCM2LQ9NUG4 571 aaPredicted RBP17.46■□□□□ 0.39
SNCA-203ENST00000394986 GLTPQ9NZD2 209 aa17.46■□□□□ 0.39
SNCA-203ENST00000394986 SLC25A15Q9Y619 301 aa17.46■□□□□ 0.39
SNCA-203ENST00000394986 NOTCH2Q04721 2471 aa17.46■□□□□ 0.38
SNCA-203ENST00000394986 HRNRQ86YZ3 2850 aaPredicted RBP17.45■□□□□ 0.38
SNCA-203ENST00000394986 CIB2O75838 187 aa17.45■□□□□ 0.38
SNCA-203ENST00000394986 IGHMP01871 453 aa17.45■□□□□ 0.38
SNCA-203ENST00000394986 ACADSP16219 412 aa17.45■□□□□ 0.38
SNCA-203ENST00000394986 FPR3P25089 353 aa17.45■□□□□ 0.38
SNCA-203ENST00000394986 ACVR1BP36896 505 aa17.45■□□□□ 0.38
SNCA-203ENST00000394986 CLRN1P58418 232 aa17.45■□□□□ 0.38
SNCA-203ENST00000394986 RPL27P61353 136 aaKnown RBP17.45■□□□□ 0.38
SNCA-203ENST00000394986 TUBA1BP68363 451 aa17.45■□□□□ 0.38
SNCA-203ENST00000394986 TUBA4AP68366 448 aa17.45■□□□□ 0.38
SNCA-203ENST00000394986 TBRG1Q3YBR2 411 aa17.45■□□□□ 0.38
SNCA-203ENST00000394986 ZNF770Q6IQ21 691 aaPredicted RBP17.45■□□□□ 0.38
SNCA-203ENST00000394986 C1orf94Q6P1W5 598 aa17.45■□□□□ 0.38
SNCA-203ENST00000394986 LRFN4Q6PJG9 635 aa17.45■□□□□ 0.38
SNCA-203ENST00000394986 TUBA1AQ71U36 451 aa17.45■□□□□ 0.38
SNCA-203ENST00000394986 TMEM179BQ7Z7N9 219 aa17.45■□□□□ 0.38
SNCA-203ENST00000394986 P2RY8Q86VZ1 359 aa17.45■□□□□ 0.38
SNCA-203ENST00000394986 CDC20BQ86Y33 519 aa17.45■□□□□ 0.38
SNCA-203ENST00000394986 PAPD5Q8NDF8 572 aaKnown RBP17.45■□□□□ 0.38
SNCA-203ENST00000394986 FANK1Q8TC84 345 aa17.45■□□□□ 0.38
SNCA-203ENST00000394986 GNPDA2Q8TDQ7 276 aa17.45■□□□□ 0.38
SNCA-203ENST00000394986 NRGNQ92686 78 aa17.45■□□□□ 0.38
SNCA-203ENST00000394986 BCL2L2Q92843 193 aaPredicted RBP17.45■□□□□ 0.38
SNCA-203ENST00000394986 MUCL1Q96DR8 90 aa17.45■□□□□ 0.38
SNCA-203ENST00000394986 PLPPR2Q96GM1 343 aa17.45■□□□□ 0.38
SNCA-203ENST00000394986 USB1Q9BQ65 265 aaKnown RBP17.45■□□□□ 0.38
SNCA-203ENST00000394986 C1QTNF6Q9BXI9 259 aa17.45■□□□□ 0.38
SNCA-203ENST00000394986 MRPL13Q9BYD1 178 aaKnown RBP17.45■□□□□ 0.38
SNCA-203ENST00000394986 ALPK2Q86TB3 2170 aa17.44■□□□□ 0.38
SNCA-203ENST00000394986 NPIPB13A6NJU9 1138 aa17.44■□□□□ 0.38
SNCA-203ENST00000394986 NPIPB4C9JG80 1138 aa17.44■□□□□ 0.38
SNCA-203ENST00000394986 TIPRLO75663 272 aa17.44■□□□□ 0.38
SNCA-203ENST00000394986 NDUFB2O95178 105 aa17.44■□□□□ 0.38
SNCA-203ENST00000394986 IFNGR2P38484 337 aa17.44■□□□□ 0.38
SNCA-203ENST00000394986 GSSP48637 474 aa17.44■□□□□ 0.38
SNCA-203ENST00000394986 FMODQ06828 376 aa17.44■□□□□ 0.38
SNCA-203ENST00000394986 MICAQ29983 383 aa17.44■□□□□ 0.38
SNCA-203ENST00000394986 BEX5Q5H9J7 111 aa17.44■□□□□ 0.38
SNCA-203ENST00000394986 C17orf78Q8N4C9 275 aa17.44■□□□□ 0.38
SNCA-203ENST00000394986 AQP11Q8NBQ7 271 aa17.44■□□□□ 0.38
SNCA-203ENST00000394986 ZNF519Q8TB69 540 aa17.44■□□□□ 0.38
SNCA-203ENST00000394986 LURAP1Q96LR2 239 aa17.44■□□□□ 0.38
SNCA-203ENST00000394986 PRR14LQ5THK1 2151 aa17.43■□□□□ 0.38
SNCA-203ENST00000394986 ZNF99A8MXY4 864 aaPredicted RBP17.43■□□□□ 0.38
SNCA-203ENST00000394986 H7C1C5 153 aa17.43■□□□□ 0.38
SNCA-203ENST00000394986 GNGT2O14610 69 aa17.43■□□□□ 0.38
SNCA-203ENST00000394986 SLC2A10O95528 541 aa17.43■□□□□ 0.38
SNCA-203ENST00000394986 GASTP01350 101 aa17.43■□□□□ 0.38
SNCA-203ENST00000394986 CD14P08571 375 aa17.43■□□□□ 0.38
SNCA-203ENST00000394986 QDPRP09417 244 aa17.43■□□□□ 0.38
SNCA-203ENST00000394986 B4GALT1P15291 398 aa17.43■□□□□ 0.38
SNCA-203ENST00000394986 HOXC12P31275 282 aa17.43■□□□□ 0.38
SNCA-203ENST00000394986 ZNF83P51522 516 aa17.43■□□□□ 0.38
SNCA-203ENST00000394986 SH3BGRP55822 239 aaPredicted RBP17.43■□□□□ 0.38
SNCA-203ENST00000394986 LCN6P62502 163 aa17.43■□□□□ 0.38
SNCA-203ENST00000394986 TSPAN31Q12999 210 aa17.43■□□□□ 0.38
SNCA-203ENST00000394986 HIST3H3Q16695 136 aa17.43■□□□□ 0.38
SNCA-203ENST00000394986 ANKRD16Q6P6B7 361 aa17.43■□□□□ 0.38
SNCA-203ENST00000394986 SMARCD3Q6STE5 483 aa17.43■□□□□ 0.38
SNCA-203ENST00000394986 HTRA1Q92743 480 aa17.43■□□□□ 0.38
SNCA-203ENST00000394986 RASD2Q96D21 266 aa17.43■□□□□ 0.38
SNCA-203ENST00000394986 Q96M85 177 aa17.43■□□□□ 0.38
SNCA-203ENST00000394986 KCNK17Q96T54 332 aa17.43■□□□□ 0.38
SNCA-203ENST00000394986 OR52D1Q9H346 318 aa17.43■□□□□ 0.38
SNCA-203ENST00000394986 POFUT2Q9Y2G5 429 aa17.43■□□□□ 0.38
SNCA-203ENST00000394986 TACC2O95359 2948 aa17.43■□□□□ 0.38
SNCA-203ENST00000394986 IGKV1D-43A0A0B4J1Z2 117 aa17.42■□□□□ 0.38
SNCA-203ENST00000394986 TEX13CA0A0J9YWL9 993 aa17.42■□□□□ 0.38
SNCA-203ENST00000394986 PLAUP00749 431 aa17.42■□□□□ 0.38
SNCA-203ENST00000394986 CD47Q08722 323 aa17.42■□□□□ 0.38
SNCA-203ENST00000394986 TAF11Q15544 211 aa17.42■□□□□ 0.38
SNCA-203ENST00000394986 KLHL24Q6TFL4 600 aa17.42■□□□□ 0.38
SNCA-203ENST00000394986 FAM122BQ7Z309 247 aa17.42■□□□□ 0.38
SNCA-203ENST00000394986 HDDC2Q7Z4H3 204 aa17.42■□□□□ 0.38
SNCA-203ENST00000394986 HS3ST5Q8IZT8 346 aa17.42■□□□□ 0.38
SNCA-203ENST00000394986 OR10G2Q8NGC3 310 aa17.42■□□□□ 0.38
SNCA-203ENST00000394986 MCHR2Q969V1 340 aa17.42■□□□□ 0.38
SNCA-203ENST00000394986 GTPBP3Q969Y2 492 aaKnown RBP17.42■□□□□ 0.38
SNCA-203ENST00000394986 SAMD8Q96LT4 415 aa17.42■□□□□ 0.38
SNCA-203ENST00000394986 GPX7Q96SL4 187 aaPredicted RBP17.42■□□□□ 0.38
SNCA-203ENST00000394986 YY1AP1Q9H869 796 aa17.42■□□□□ 0.38
SNCA-203ENST00000394986 NRIP3Q9NQ35 241 aa17.42■□□□□ 0.38
SNCA-203ENST00000394986 GRHPRQ9UBQ7 328 aa17.42■□□□□ 0.38
SNCA-203ENST00000394986 AMDHD2Q9Y303 409 aa17.42■□□□□ 0.38
SNCA-203ENST00000394986 POLQO75417 2590 aa17.42■□□□□ 0.38
SNCA-203ENST00000394986 CACNA1DQ01668 2161 aa17.42■□□□□ 0.38
SNCA-203ENST00000394986 ZNF503-AS2A6NEH8 195 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms