RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 HIKESHIQ53FT3 197 aa16.65■□□□□ 0.26
PDLIM7-204ENST00000393546 ARMC4Q5T2S8 1044 aa16.65■□□□□ 0.26
PDLIM7-204ENST00000393546 OR2T5Q6IEZ7 315 aa16.65■□□□□ 0.26
PDLIM7-204ENST00000393546 KLHL17Q6TDP4 642 aa16.65■□□□□ 0.26
PDLIM7-204ENST00000393546 ZER1Q7Z7L7 766 aa16.65■□□□□ 0.26
PDLIM7-204ENST00000393546 LRRC75AQ8NAA5 344 aa16.65■□□□□ 0.26
PDLIM7-204ENST00000393546 OR2T29Q8NH02 315 aa16.65■□□□□ 0.26
PDLIM7-204ENST00000393546 MAGEE2Q8TD90 523 aaPredicted RBP16.65■□□□□ 0.26
PDLIM7-204ENST00000393546 CANT1Q8WVQ1 401 aa16.65■□□□□ 0.26
PDLIM7-204ENST00000393546 ZNF837Q96EG3 531 aaPredicted RBP16.65■□□□□ 0.26
PDLIM7-204ENST00000393546 OBP2BQ9NPH6 170 aa16.65■□□□□ 0.26
PDLIM7-204ENST00000393546 ZNF346Q9UL40 294 aaKnown RBP16.65■□□□□ 0.26
PDLIM7-204ENST00000393546 LYVE1Q9Y5Y7 322 aa16.65■□□□□ 0.26
PDLIM7-204ENST00000393546 A0A096LPE4 126 aa16.64■□□□□ 0.25
PDLIM7-204ENST00000393546 A0A1W2PPZ6 126 aa16.64■□□□□ 0.25
PDLIM7-204ENST00000393546 TRMUO75648 421 aaKnown RBP16.64■□□□□ 0.25
PDLIM7-204ENST00000393546 PGA4P0DJD7 388 aa16.64■□□□□ 0.25
PDLIM7-204ENST00000393546 PGA3P0DJD8 388 aa16.64■□□□□ 0.25
PDLIM7-204ENST00000393546 PAX7P23759 505 aa16.64■□□□□ 0.25
PDLIM7-204ENST00000393546 RPL27P61353 136 aaKnown RBP16.64■□□□□ 0.25
PDLIM7-204ENST00000393546 TOP3AQ13472 1001 aaPredicted RBP16.64■□□□□ 0.25
PDLIM7-204ENST00000393546 NCMAPQ5T1S8 102 aa16.64■□□□□ 0.25
PDLIM7-204ENST00000393546 IGFN1Q86VF2 1251 aa16.64■□□□□ 0.25
PDLIM7-204ENST00000393546 GNPDA2Q8TDQ7 276 aa16.64■□□□□ 0.25
PDLIM7-204ENST00000393546 RSRC1Q96IZ7 334 aaKnown RBP16.64■□□□□ 0.25
PDLIM7-204ENST00000393546 HS3ST6Q96QI5 342 aa16.64■□□□□ 0.25
PDLIM7-204ENST00000393546 MRPL13Q9BYD1 178 aaKnown RBP16.64■□□□□ 0.25
PDLIM7-204ENST00000393546 YY1AP1Q9H869 796 aa16.64■□□□□ 0.25
PDLIM7-204ENST00000393546 PLEKHF2Q9H8W4 249 aa16.64■□□□□ 0.25
PDLIM7-204ENST00000393546 REEP1Q9H902 201 aa16.64■□□□□ 0.25
PDLIM7-204ENST00000393546 SIGLEC7Q9Y286 467 aa16.64■□□□□ 0.25
PDLIM7-204ENST00000393546 SPG11Q96JI7 2443 aa16.64■□□□□ 0.25
PDLIM7-204ENST00000393546 TCRBV3S1A0A5B6 114 aa16.63■□□□□ 0.25
PDLIM7-204ENST00000393546 DPRXA6NFQ7 191 aa16.63■□□□□ 0.25
PDLIM7-204ENST00000393546 NDUFB2O95178 105 aa16.63■□□□□ 0.25
PDLIM7-204ENST00000393546 CST1P01037 141 aa16.63■□□□□ 0.25
PDLIM7-204ENST00000393546 IGHMP01871 453 aa16.63■□□□□ 0.25
PDLIM7-204ENST00000393546 CD3EP07766 207 aa16.63■□□□□ 0.25
PDLIM7-204ENST00000393546 QDPRP09417 244 aa16.63■□□□□ 0.25
PDLIM7-204ENST00000393546 ACVR1BP36896 505 aa16.63■□□□□ 0.25
PDLIM7-204ENST00000393546 ZNF83P51522 516 aa16.63■□□□□ 0.25
PDLIM7-204ENST00000393546 RUNX1T1Q06455 604 aa16.63■□□□□ 0.25
PDLIM7-204ENST00000393546 FAM205BPQ63HN1 556 aa16.63■□□□□ 0.25
PDLIM7-204ENST00000393546 C1orf94Q6P1W5 598 aa16.63■□□□□ 0.25
PDLIM7-204ENST00000393546 LRFN4Q6PJG9 635 aa16.63■□□□□ 0.25
PDLIM7-204ENST00000393546 SEZ6L2Q6UXD5 910 aa16.63■□□□□ 0.25
PDLIM7-204ENST00000393546 CCDC36Q8IYA8 594 aa16.63■□□□□ 0.25
PDLIM7-204ENST00000393546 SYT14Q8NB59 555 aa16.63■□□□□ 0.25
PDLIM7-204ENST00000393546 GPA33Q99795 319 aa16.63■□□□□ 0.25
PDLIM7-204ENST00000393546 C1QTNF6Q9BXI9 259 aa16.63■□□□□ 0.25
PDLIM7-204ENST00000393546 NPAP1Q9NZP6 1156 aa16.63■□□□□ 0.25
PDLIM7-204ENST00000393546 SAMHD1Q9Y3Z3 626 aaKnown RBP16.63■□□□□ 0.25
PDLIM7-204ENST00000393546 ARPC4-TTLL3A0A0A6YYG9 625 aa16.62■□□□□ 0.25
PDLIM7-204ENST00000393546 A0A1W2PPR1 153 aa16.62■□□□□ 0.25
PDLIM7-204ENST00000393546 A6NIZ1 184 aa16.62■□□□□ 0.25
PDLIM7-204ENST00000393546 GNGT2O14610 69 aa16.62■□□□□ 0.25
PDLIM7-204ENST00000393546 DHHO43323 396 aa16.62■□□□□ 0.25
PDLIM7-204ENST00000393546 CCNB2O95067 398 aa16.62■□□□□ 0.25
PDLIM7-204ENST00000393546 CD14P08571 375 aa16.62■□□□□ 0.25
PDLIM7-204ENST00000393546 NR2C1P13056 603 aa16.62■□□□□ 0.25
PDLIM7-204ENST00000393546 FPR3P25089 353 aa16.62■□□□□ 0.25
PDLIM7-204ENST00000393546 RAP1BP61224 184 aa16.62■□□□□ 0.25
PDLIM7-204ENST00000393546 RAP1AP62834 184 aa16.62■□□□□ 0.25
PDLIM7-204ENST00000393546 ERVK-25P63136 954 aa16.62■□□□□ 0.25
PDLIM7-204ENST00000393546 BSPH1Q075Z2 132 aa16.62■□□□□ 0.25
PDLIM7-204ENST00000393546 GK3PQ14409 553 aa16.62■□□□□ 0.25
PDLIM7-204ENST00000393546 HIST3H3Q16695 136 aa16.62■□□□□ 0.25
PDLIM7-204ENST00000393546 TMEM108Q6UXF1 575 aa16.62■□□□□ 0.25
PDLIM7-204ENST00000393546 ZNF813Q6ZN06 617 aa16.62■□□□□ 0.25
PDLIM7-204ENST00000393546 ZNF704Q6ZNC4 412 aaPredicted RBP16.62■□□□□ 0.25
PDLIM7-204ENST00000393546 NOXO1Q8NFA2 376 aa16.62■□□□□ 0.25
PDLIM7-204ENST00000393546 OR4C15Q8NGM1 316 aa16.62■□□□□ 0.25
PDLIM7-204ENST00000393546 NRGNQ92686 78 aa16.62■□□□□ 0.25
PDLIM7-204ENST00000393546 MCHR2Q969V1 340 aa16.62■□□□□ 0.25
PDLIM7-204ENST00000393546 FOXB1Q99853 325 aa16.62■□□□□ 0.25
PDLIM7-204ENST00000393546 KATNB1Q9BVA0 655 aa16.62■□□□□ 0.25
PDLIM7-204ENST00000393546 GRHPRQ9UBQ7 328 aa16.62■□□□□ 0.25
PDLIM7-204ENST00000393546 RNF115Q9Y4L5 304 aa16.62■□□□□ 0.25
PDLIM7-204ENST00000393546 AKAP6Q13023 2319 aa16.61■□□□□ 0.25
PDLIM7-204ENST00000393546 M0R1B8 84 aa16.61■□□□□ 0.25
PDLIM7-204ENST00000393546 ENTPD5O75356 428 aa16.61■□□□□ 0.25
PDLIM7-204ENST00000393546 ZNF26P17031 533 aaPredicted RBP16.61■□□□□ 0.25
PDLIM7-204ENST00000393546 PTAFRP25105 342 aa16.61■□□□□ 0.25
PDLIM7-204ENST00000393546 GSSP48637 474 aa16.61■□□□□ 0.25
PDLIM7-204ENST00000393546 ZNF84P51523 738 aa16.61■□□□□ 0.25
PDLIM7-204ENST00000393546 PPP1R8Q12972 351 aaKnown RBP16.61■□□□□ 0.25
PDLIM7-204ENST00000393546 TSPAN31Q12999 210 aa16.61■□□□□ 0.25
PDLIM7-204ENST00000393546 MICAQ29983 383 aa16.61■□□□□ 0.25
PDLIM7-204ENST00000393546 PGBD2Q6P3X8 592 aa16.61■□□□□ 0.25
PDLIM7-204ENST00000393546 SMARCD3Q6STE5 483 aa16.61■□□□□ 0.25
PDLIM7-204ENST00000393546 ZNF627Q7L945 461 aa16.61■□□□□ 0.25
PDLIM7-204ENST00000393546 CDH24Q86UP0 819 aa16.61■□□□□ 0.25
PDLIM7-204ENST00000393546 ARIH2OSQ8N7S6 290 aa16.61■□□□□ 0.25
PDLIM7-204ENST00000393546 FNDC8Q8TC99 324 aa16.61■□□□□ 0.25
PDLIM7-204ENST00000393546 HDAC2Q92769 488 aaKnown RBP16.61■□□□□ 0.25
PDLIM7-204ENST00000393546 TSPAN32Q96QS1 320 aa16.61■□□□□ 0.25
PDLIM7-204ENST00000393546 RBP7Q96R05 134 aa16.61■□□□□ 0.25
PDLIM7-204ENST00000393546 TMEM204Q9BSN7 226 aa16.61■□□□□ 0.25
PDLIM7-204ENST00000393546 ALG12Q9BV10 488 aa16.61■□□□□ 0.25
PDLIM7-204ENST00000393546 NELFAQ9H3P2 528 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms