RNA–Protein interactions for RNA: ENST00000390964.1

SNORA40.3-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 122 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.3-201ENST00000390964 CCR8P51685 355 aa1.8□□□□□ -2.12
SNORA40.3-201ENST00000390964 SUB1P53999 127 aaKnown RBP eCLIP1.8□□□□□ -2.12
SNORA40.3-201ENST00000390964 BPIFB3P59826 476 aa1.8□□□□□ -2.12
SNORA40.3-201ENST00000390964 ESRRGP62508 458 aa1.8□□□□□ -2.12
SNORA40.3-201ENST00000390964 RAP1AP62834 184 aa1.8□□□□□ -2.12
SNORA40.3-201ENST00000390964 DGUOKQ16854 277 aa1.8□□□□□ -2.12
SNORA40.3-201ENST00000390964 HES5Q5TA89 166 aa1.8□□□□□ -2.12
SNORA40.3-201ENST00000390964 LINC00173Q6ZV60 143 aa1.8□□□□□ -2.12
SNORA40.3-201ENST00000390964 BIVMQ86UB2 503 aa1.8□□□□□ -2.12
SNORA40.3-201ENST00000390964 STPG2Q8N412 459 aa1.8□□□□□ -2.12
SNORA40.3-201ENST00000390964 MFSD9Q8NBP5 474 aa1.8□□□□□ -2.12
SNORA40.3-201ENST00000390964 SDR42E1Q8WUS8 393 aa1.8□□□□□ -2.12
SNORA40.3-201ENST00000390964 RGP1Q92546 391 aaPredicted RBP1.8□□□□□ -2.12
SNORA40.3-201ENST00000390964 SGK3Q96BR1 496 aa1.8□□□□□ -2.12
SNORA40.3-201ENST00000390964 DTNBP1Q96EV8 351 aa1.8□□□□□ -2.12
SNORA40.3-201ENST00000390964 FAIM2Q9BWQ8 316 aa1.8□□□□□ -2.12
SNORA40.3-201ENST00000390964 PARD6BQ9BYG5 372 aa1.8□□□□□ -2.12
SNORA40.3-201ENST00000390964 HPF1Q9NWY4 346 aa1.8□□□□□ -2.12
SNORA40.3-201ENST00000390964 ZNRD1Q9P1U0 126 aa1.8□□□□□ -2.12
SNORA40.3-201ENST00000390964 IGHV5-10-1A0A0J9YXX1 117 aa1.79□□□□□ -2.12
SNORA40.3-201ENST00000390964 RPL36A-HNRNPH2H7BZ11 118 aa1.79□□□□□ -2.12
SNORA40.3-201ENST00000390964 RBFOX2O43251 390 aaKnown RBP eCLIP1.79□□□□□ -2.12
SNORA40.3-201ENST00000390964 SMPD2O60906 423 aa1.79□□□□□ -2.12
SNORA40.3-201ENST00000390964 MPZL1O95297 269 aa1.79□□□□□ -2.12
SNORA40.3-201ENST00000390964 ADRA2AP08913 450 aa1.79□□□□□ -2.12
SNORA40.3-201ENST00000390964 IQCF3P0C7M6 154 aa1.79□□□□□ -2.12
SNORA40.3-201ENST00000390964 POLR2MP0CAP2 368 aa1.79□□□□□ -2.12
SNORA40.3-201ENST00000390964 RNASE2P10153 161 aaKnown RBP1.79□□□□□ -2.12
SNORA40.3-201ENST00000390964 PRPS2P11908 318 aa1.79□□□□□ -2.12
SNORA40.3-201ENST00000390964 TCN2P20062 427 aa1.79□□□□□ -2.12
SNORA40.3-201ENST00000390964 FDFT1P37268 417 aa1.79□□□□□ -2.12
SNORA40.3-201ENST00000390964 GRIA1P42261 906 aa1.79□□□□□ -2.12
SNORA40.3-201ENST00000390964 NAMPTP43490 491 aa1.79□□□□□ -2.12
SNORA40.3-201ENST00000390964 NCBP2P52298 156 aaKnown RBP eCLIP1.79□□□□□ -2.12
SNORA40.3-201ENST00000390964 CACNG7P62955 275 aa1.79□□□□□ -2.12
SNORA40.3-201ENST00000390964 SYCNQ0VAF6 134 aa1.79□□□□□ -2.12
SNORA40.3-201ENST00000390964 SCRN3Q0VDG4 424 aa1.79□□□□□ -2.12
SNORA40.3-201ENST00000390964 SF3A2Q15428 464 aaKnown RBP1.79□□□□□ -2.12
SNORA40.3-201ENST00000390964 DNLZQ5SXM8 178 aa1.79□□□□□ -2.12
SNORA40.3-201ENST00000390964 WDR86Q86TI4 376 aa1.79□□□□□ -2.12
SNORA40.3-201ENST00000390964 OR52P1PQ8NH57 321 aa1.79□□□□□ -2.12
SNORA40.3-201ENST00000390964 C16orf45Q96MC5 204 aaPredicted RBP1.79□□□□□ -2.12
SNORA40.3-201ENST00000390964 RBM14Q96PK6 669 aaKnown RBP1.79□□□□□ -2.12
SNORA40.3-201ENST00000390964 SLC38A2Q96QD8 506 aa1.79□□□□□ -2.12
SNORA40.3-201ENST00000390964 PALMDQ9NP74 551 aa1.79□□□□□ -2.12
SNORA40.3-201ENST00000390964 ADAP2Q9NPF8 381 aa1.79□□□□□ -2.12
SNORA40.3-201ENST00000390964 CENPJQ9HC77 1338 aaPredicted RBP1.79□□□□□ -2.12
SNORA40.3-201ENST00000390964 MSH6P52701 1360 aa1.79□□□□□ -2.12
SNORA40.3-201ENST00000390964 COL27A1Q8IZC6 1860 aaPredicted RBP1.79□□□□□ -2.12
SNORA40.3-201ENST00000390964 PTPRTO14522 1441 aa1.78□□□□□ -2.12
SNORA40.3-201ENST00000390964 K7EQM0 130 aa1.78□□□□□ -2.12
SNORA40.3-201ENST00000390964 RRP8O43159 456 aaKnown RBP1.78□□□□□ -2.12
SNORA40.3-201ENST00000390964 TOM1O60784 492 aa1.78□□□□□ -2.12
SNORA40.3-201ENST00000390964 B3GALNT1O75752 331 aa1.78□□□□□ -2.12
SNORA40.3-201ENST00000390964 IGHV2-5P01817 119 aa1.78□□□□□ -2.12
SNORA40.3-201ENST00000390964 LINC00869P0C866 280 aa1.78□□□□□ -2.12
SNORA40.3-201ENST00000390964 HSPA5P11021 654 aaKnown RBP1.78□□□□□ -2.12
SNORA40.3-201ENST00000390964 FOLR1P15328 257 aa1.78□□□□□ -2.12
SNORA40.3-201ENST00000390964 RORAP35398 523 aa1.78□□□□□ -2.12
SNORA40.3-201ENST00000390964 CDK16Q00536 496 aa1.78□□□□□ -2.12
SNORA40.3-201ENST00000390964 ELP6Q0PNE2 266 aa1.78□□□□□ -2.12
SNORA40.3-201ENST00000390964 ERCC8Q13216 396 aa1.78□□□□□ -2.12
SNORA40.3-201ENST00000390964 POU2AF1Q16633 256 aa1.78□□□□□ -2.12
SNORA40.3-201ENST00000390964 KCTD21Q4G0X4 260 aa1.78□□□□□ -2.12
SNORA40.3-201ENST00000390964 ZNF684Q5T5D7 378 aa1.78□□□□□ -2.12
SNORA40.3-201ENST00000390964 OR4F3Q6IEY1 312 aa1.78□□□□□ -2.12
SNORA40.3-201ENST00000390964 TRIM40Q6P9F5 258 aa1.78□□□□□ -2.12
SNORA40.3-201ENST00000390964 DUX4L9Q6RFH8 374 aaPredicted RBP1.78□□□□□ -2.12
SNORA40.3-201ENST00000390964 ZNF493Q6ZR52 646 aa1.78□□□□□ -2.12
SNORA40.3-201ENST00000390964 ABHD13Q7L211 337 aa1.78□□□□□ -2.12
SNORA40.3-201ENST00000390964 TRIM69Q86WT6 500 aa1.78□□□□□ -2.12
SNORA40.3-201ENST00000390964 VSTM4Q8IW00 320 aa1.78□□□□□ -2.12
SNORA40.3-201ENST00000390964 ZNF557Q8N988 423 aaPredicted RBP1.78□□□□□ -2.12
SNORA40.3-201ENST00000390964 TRPV1Q8NER1 839 aa1.78□□□□□ -2.12
SNORA40.3-201ENST00000390964 ESR2Q92731 530 aa1.78□□□□□ -2.12
SNORA40.3-201ENST00000390964 THRSPQ92748 146 aa1.78□□□□□ -2.12
SNORA40.3-201ENST00000390964 ZNF607Q96SK3 696 aa1.78□□□□□ -2.12
SNORA40.3-201ENST00000390964 SH3GL3Q99963 347 aa1.78□□□□□ -2.12
SNORA40.3-201ENST00000390964 KCTD14Q9BQ13 255 aaPredicted RBP1.78□□□□□ -2.12
SNORA40.3-201ENST00000390964 RAB33BQ9H082 229 aa1.78□□□□□ -2.12
SNORA40.3-201ENST00000390964 NIPAL2Q9H841 368 aa1.78□□□□□ -2.12
SNORA40.3-201ENST00000390964 LIN28AQ9H9Z2 209 aaKnown RBP1.78□□□□□ -2.12
SNORA40.3-201ENST00000390964 MCCC2Q9HCC0 563 aa1.78□□□□□ -2.12
SNORA40.3-201ENST00000390964 HMG20AQ9NP66 347 aa1.78□□□□□ -2.12
SNORA40.3-201ENST00000390964 ISYNA1Q9NPH2 558 aa1.78□□□□□ -2.12
SNORA40.3-201ENST00000390964 TMOD2Q9NZR1 351 aa1.78□□□□□ -2.12
SNORA40.3-201ENST00000390964 GPATCH8Q9UKJ3 1502 aaKnown RBP1.77□□□□□ -2.13
SNORA40.3-201ENST00000390964 IGLV3-12A0A075B6K2 115 aa1.77□□□□□ -2.13
SNORA40.3-201ENST00000390964 IGHV3-74A0A0B4J1X5 117 aa1.77□□□□□ -2.13
SNORA40.3-201ENST00000390964 A0A0B4J2A0 478 aa1.77□□□□□ -2.13
SNORA40.3-201ENST00000390964 KMOO15229 486 aa1.77□□□□□ -2.13
SNORA40.3-201ENST00000390964 PEX11AO75192 247 aa1.77□□□□□ -2.13
SNORA40.3-201ENST00000390964 SLC25A14O95258 325 aaPredicted RBP1.77□□□□□ -2.13
SNORA40.3-201ENST00000390964 CAPN1P07384 714 aa1.77□□□□□ -2.13
SNORA40.3-201ENST00000390964 HEXBP07686 556 aa1.77□□□□□ -2.13
SNORA40.3-201ENST00000390964 SLC2A5P22732 501 aa1.77□□□□□ -2.13
SNORA40.3-201ENST00000390964 RDXP35241 583 aaKnown RBP1.77□□□□□ -2.13
SNORA40.3-201ENST00000390964 HSD17B2P37059 387 aa1.77□□□□□ -2.13
SNORA40.3-201ENST00000390964 YAP1P46937 504 aaKnown RBP1.77□□□□□ -2.13
SNORA40.3-201ENST00000390964 UGT2B15P54855 530 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 442.1 ms