RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 C9orf16Q9BUW7 83 aa11.18□□□□□ -0.62
SMN1-202ENST00000380707 TSSK6Q9BXA6 273 aa11.18□□□□□ -0.62
SMN1-202ENST00000380707 MRPL13Q9BYD1 178 aaKnown RBP11.18□□□□□ -0.62
SMN1-202ENST00000380707 RNPEPL1Q9HAU8 725 aa11.18□□□□□ -0.62
SMN1-202ENST00000380707 TBC1D23Q9NUY8 699 aa11.18□□□□□ -0.62
SMN1-202ENST00000380707 MALT1Q9UDY8 824 aa11.18□□□□□ -0.62
SMN1-202ENST00000380707 M0R3G1 203 aa11.17□□□□□ -0.62
SMN1-202ENST00000380707 ARPC3O15145 178 aa11.17□□□□□ -0.62
SMN1-202ENST00000380707 TRMUO75648 421 aaKnown RBP11.17□□□□□ -0.62
SMN1-202ENST00000380707 CNOT4O95628 575 aaKnown RBP11.17□□□□□ -0.62
SMN1-202ENST00000380707 TXNDC12O95881 172 aa11.17□□□□□ -0.62
SMN1-202ENST00000380707 IGHG1P01857 330 aa11.17□□□□□ -0.62
SMN1-202ENST00000380707 APEHP13798 732 aaKnown RBP11.17□□□□□ -0.62
SMN1-202ENST00000380707 ACADSP16219 412 aa11.17□□□□□ -0.62
SMN1-202ENST00000380707 IGFBP5P24593 272 aa11.17□□□□□ -0.62
SMN1-202ENST00000380707 GRNP28799 593 aaKnown RBP11.17□□□□□ -0.62
SMN1-202ENST00000380707 EPHA2P29317 976 aa11.17□□□□□ -0.62
SMN1-202ENST00000380707 SDHAP31040 664 aa11.17□□□□□ -0.62
SMN1-202ENST00000380707 ASCL1P50553 236 aa11.17□□□□□ -0.62
SMN1-202ENST00000380707 ALDH3A2P51648 485 aa11.17□□□□□ -0.62
SMN1-202ENST00000380707 RPS6KA3P51812 740 aa11.17□□□□□ -0.62
SMN1-202ENST00000380707 FOXG1P55316 489 aaPredicted RBP11.17□□□□□ -0.62
SMN1-202ENST00000380707 FAPQ12884 760 aa11.17□□□□□ -0.62
SMN1-202ENST00000380707 DAG1Q14118 895 aa11.17□□□□□ -0.62
SMN1-202ENST00000380707 LRRC36Q1X8D7 754 aa11.17□□□□□ -0.62
SMN1-202ENST00000380707 MESTQ5EB52 335 aa11.17□□□□□ -0.62
SMN1-202ENST00000380707 GPR139Q6DWJ6 353 aa11.17□□□□□ -0.62
SMN1-202ENST00000380707 ZBTB49Q6ZSB9 765 aa11.17□□□□□ -0.62
SMN1-202ENST00000380707 BEND4Q6ZU67 534 aa11.17□□□□□ -0.62
SMN1-202ENST00000380707 GABRG1Q8N1C3 465 aa11.17□□□□□ -0.62
SMN1-202ENST00000380707 IQCF1Q8N6M8 205 aa11.17□□□□□ -0.62
SMN1-202ENST00000380707 POMGNT2Q8NAT1 580 aa11.17□□□□□ -0.62
SMN1-202ENST00000380707 OR2T33Q8NG76 320 aa11.17□□□□□ -0.62
SMN1-202ENST00000380707 OR4Q3Q8NH05 313 aa11.17□□□□□ -0.62
SMN1-202ENST00000380707 HDAC2Q92769 488 aaKnown RBP11.17□□□□□ -0.62
SMN1-202ENST00000380707 LRR1Q96L50 414 aa11.17□□□□□ -0.62
SMN1-202ENST00000380707 ZNF570Q96NI8 536 aa11.17□□□□□ -0.62
SMN1-202ENST00000380707 ALKBH3Q96Q83 286 aaPredicted RBP11.17□□□□□ -0.62
SMN1-202ENST00000380707 KCNK17Q96T54 332 aa11.17□□□□□ -0.62
SMN1-202ENST00000380707 RBM24Q9BX46 236 aaKnown RBP11.17□□□□□ -0.62
SMN1-202ENST00000380707 LINC00470Q9BZP3 86 aa11.17□□□□□ -0.62
SMN1-202ENST00000380707 ASB6Q9NWX5 421 aa11.17□□□□□ -0.62
SMN1-202ENST00000380707 GALNT8Q9NY28 637 aa11.17□□□□□ -0.62
SMN1-202ENST00000380707 USE1Q9NZ43 259 aa11.17□□□□□ -0.62
SMN1-202ENST00000380707 UPB1Q9UBR1 384 aa11.17□□□□□ -0.62
SMN1-202ENST00000380707 CENPEQ02224 2701 aa11.16□□□□□ -0.62
SMN1-202ENST00000380707 CACNA1CQ13936 2221 aa11.16□□□□□ -0.62
SMN1-202ENST00000380707 CELSR2Q9HCU4 2923 aa11.16□□□□□ -0.62
SMN1-202ENST00000380707 OR6C65A6NJZ3 312 aa11.16□□□□□ -0.62
SMN1-202ENST00000380707 H7C1C5 153 aa11.16□□□□□ -0.62
SMN1-202ENST00000380707 IMPA2O14732 288 aa11.16□□□□□ -0.62
SMN1-202ENST00000380707 ARHGEF9O43307 516 aa11.16□□□□□ -0.62
SMN1-202ENST00000380707 KRT33AO76009 404 aa11.16□□□□□ -0.62
SMN1-202ENST00000380707 HIST1H1CP16403 213 aaKnown RBP11.16□□□□□ -0.62
SMN1-202ENST00000380707 PEX2P28328 305 aa11.16□□□□□ -0.62
SMN1-202ENST00000380707 NOS3P29474 1203 aa11.16□□□□□ -0.62
SMN1-202ENST00000380707 POLR2IP36954 125 aaKnown RBP11.16□□□□□ -0.62
SMN1-202ENST00000380707 CDKN2AP42771 156 aaKnown RBP11.16□□□□□ -0.62
SMN1-202ENST00000380707 GIPRP48546 466 aa11.16□□□□□ -0.62
SMN1-202ENST00000380707 CSNK1A1P48729 337 aa11.16□□□□□ -0.62
SMN1-202ENST00000380707 CRISP1P54107 249 aa11.16□□□□□ -0.62
SMN1-202ENST00000380707 LCN6P62502 163 aa11.16□□□□□ -0.62
SMN1-202ENST00000380707 SLC34A1Q06495 639 aa11.16□□□□□ -0.62
SMN1-202ENST00000380707 FAM27E3Q08E93 113 aa11.16□□□□□ -0.62
SMN1-202ENST00000380707 GINS1Q14691 196 aa11.16□□□□□ -0.62
SMN1-202ENST00000380707 HIST3H3Q16695 136 aa11.16□□□□□ -0.62
SMN1-202ENST00000380707 FBXL19-AS1Q494R0 122 aa11.16□□□□□ -0.62
SMN1-202ENST00000380707 SLC35F1Q5T1Q4 408 aa11.16□□□□□ -0.62
SMN1-202ENST00000380707 TMEM236Q5W0B7 351 aa11.16□□□□□ -0.62
SMN1-202ENST00000380707 ACSM5Q6NUN0 579 aa11.16□□□□□ -0.62
SMN1-202ENST00000380707 LRFN4Q6PJG9 635 aa11.16□□□□□ -0.62
SMN1-202ENST00000380707 PTCHD4Q6ZW05 846 aa11.16□□□□□ -0.62
SMN1-202ENST00000380707 HDDC2Q7Z4H3 204 aa11.16□□□□□ -0.62
SMN1-202ENST00000380707 CXorf67Q86X51 503 aaPredicted RBP11.16□□□□□ -0.62
SMN1-202ENST00000380707 GPR137CQ8N3F9 429 aa11.16□□□□□ -0.62
SMN1-202ENST00000380707 LNX2Q8N448 690 aa11.16□□□□□ -0.62
SMN1-202ENST00000380707 OR6N1Q8NGY5 312 aa11.16□□□□□ -0.62
SMN1-202ENST00000380707 TEX47Q8TBZ9 253 aa11.16□□□□□ -0.62
SMN1-202ENST00000380707 TMEM54Q969K7 222 aa11.16□□□□□ -0.62
SMN1-202ENST00000380707 ZNF837Q96EG3 531 aaPredicted RBP11.16□□□□□ -0.62
SMN1-202ENST00000380707 CRLF2Q9HC73 371 aa11.16□□□□□ -0.62
SMN1-202ENST00000380707 GLTPQ9NZD2 209 aa11.16□□□□□ -0.62
SMN1-202ENST00000380707 A6NIZ1 184 aa11.15□□□□□ -0.62
SMN1-202ENST00000380707 CENPBD1B2RD01 187 aa11.15□□□□□ -0.62
SMN1-202ENST00000380707 XKRYO14609 159 aa11.15□□□□□ -0.62
SMN1-202ENST00000380707 CASQ2O14958 399 aaPredicted RBP11.15□□□□□ -0.62
SMN1-202ENST00000380707 IDH3BO43837 385 aa11.15□□□□□ -0.62
SMN1-202ENST00000380707 ITGA5P08648 1049 aa11.15□□□□□ -0.62
SMN1-202ENST00000380707 IGHV1-2P23083 117 aa11.15□□□□□ -0.62
SMN1-202ENST00000380707 CLRN1P58418 232 aa11.15□□□□□ -0.62
SMN1-202ENST00000380707 RAP1BP61224 184 aa11.15□□□□□ -0.62
SMN1-202ENST00000380707 ESRRGP62508 458 aa11.15□□□□□ -0.62
SMN1-202ENST00000380707 RAP1AP62834 184 aa11.15□□□□□ -0.62
SMN1-202ENST00000380707 CDK5Q00535 292 aa11.15□□□□□ -0.62
SMN1-202ENST00000380707 MYBPC1Q00872 1141 aa11.15□□□□□ -0.62
SMN1-202ENST00000380707 ROR2Q01974 943 aaKnown RBP11.15□□□□□ -0.62
SMN1-202ENST00000380707 RIPK1Q13546 671 aa11.15□□□□□ -0.62
SMN1-202ENST00000380707 KRR1Q13601 381 aaKnown RBP11.15□□□□□ -0.62
SMN1-202ENST00000380707 PTGES3Q15185 160 aaKnown RBP11.15□□□□□ -0.62
SMN1-202ENST00000380707 TSC22D1Q15714 1073 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms