RNA–Protein interactions for RNA: ENST00000376646.3

VPS13A-206, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5 BASIC

Gene VPS13A, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-206ENST00000376646 FAM71E2Q8N5Q1 922 aa1.37□□□□□ -2.19
VPS13A-206ENST00000376646 MS4A15Q8N5U1 240 aa1.37□□□□□ -2.19
VPS13A-206ENST00000376646 CEP112Q8N8E3 955 aa1.37□□□□□ -2.19
VPS13A-206ENST00000376646 HSD17B11Q8NBQ5 300 aa1.37□□□□□ -2.19
VPS13A-206ENST00000376646 SPATA4Q8NEY3 305 aa1.37□□□□□ -2.19
VPS13A-206ENST00000376646 B3GNT7Q8NFL0 401 aa1.37□□□□□ -2.19
VPS13A-206ENST00000376646 VN1R2Q8NFZ6 395 aa1.37□□□□□ -2.19
VPS13A-206ENST00000376646 OR4F15Q8NGB8 312 aa1.37□□□□□ -2.19
VPS13A-206ENST00000376646 SDR42E1Q8WUS8 393 aa1.37□□□□□ -2.19
VPS13A-206ENST00000376646 SGK3Q96BR1 496 aa1.37□□□□□ -2.19
VPS13A-206ENST00000376646 ATP5SQ99766 215 aa1.37□□□□□ -2.19
VPS13A-206ENST00000376646 SH3GL1Q99961 368 aa1.37□□□□□ -2.19
VPS13A-206ENST00000376646 FAM192AQ9GZU8 254 aa1.37□□□□□ -2.19
VPS13A-206ENST00000376646 RANBP3Q9H6Z4 567 aaPredicted RBP1.37□□□□□ -2.19
VPS13A-206ENST00000376646 ANKRA2Q9H9E1 313 aa1.37□□□□□ -2.19
VPS13A-206ENST00000376646 GLRX2Q9NS18 164 aa1.37□□□□□ -2.19
VPS13A-206ENST00000376646 EXD2Q9NVH0 621 aa1.37□□□□□ -2.19
VPS13A-206ENST00000376646 SLC25A37Q9NYZ2 338 aa1.37□□□□□ -2.19
VPS13A-206ENST00000376646 DEC1Q9P2X7 70 aa1.37□□□□□ -2.19
VPS13A-206ENST00000376646 XCL2Q9UBD3 114 aa1.37□□□□□ -2.19
VPS13A-206ENST00000376646 ZNF225Q9UK10 706 aa1.37□□□□□ -2.19
VPS13A-206ENST00000376646 NUP50Q9UKX7 468 aa1.37□□□□□ -2.19
VPS13A-206ENST00000376646 TRAPPC4Q9Y296 219 aa1.37□□□□□ -2.19
VPS13A-206ENST00000376646 HEBP2Q9Y5Z4 205 aa1.37□□□□□ -2.19
VPS13A-206ENST00000376646 CACNG2Q9Y698 323 aa1.37□□□□□ -2.19
VPS13A-206ENST00000376646 LTBP1Q14766 1721 aa1.37□□□□□ -2.19
VPS13A-206ENST00000376646 MUC19Q7Z5P9 8384 aa1.37□□□□□ -2.19
VPS13A-206ENST00000376646 A6NDX4 124 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 LSM1O15116 133 aaKnown RBP1.36□□□□□ -2.19
VPS13A-206ENST00000376646 TSPAN13O95857 204 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 ANXA5P08758 320 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 CSF3P09919 207 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 GKN3PP0CG01 181 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 ZNF24P17028 368 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 CNR1P21554 472 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 CCNCP24863 283 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 SLC26A3P40879 764 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 CDKN1BP46527 198 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 RPS10P46783 165 aaKnown RBP1.36□□□□□ -2.19
VPS13A-206ENST00000376646 RORCP51449 518 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 SUB1P53999 127 aaKnown RBP eCLIP1.36□□□□□ -2.19
VPS13A-206ENST00000376646 CCNA1P78396 465 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 MRPS22P82650 360 aaKnown RBP1.36□□□□□ -2.19
VPS13A-206ENST00000376646 MECOMQ03112 1051 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 PSG5Q15238 335 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 LRRC10Q5BKY1 277 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 XKR7Q5GH72 579 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 FRMPD2BQ6IN97 320 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 ZNF621Q6ZSS3 439 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 COX15Q7KZN9 410 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 Q8N9W7 124 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 CCDC54Q8NEL0 328 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 OR1S2Q8NGQ3 325 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 OR1N2Q8NGR9 330 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 OR2G3Q8NGZ4 309 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 TMEM158Q8WZ71 300 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 KIFAP3Q92845 792 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 SLC35E1Q96K37 410 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 OR2M2Q96R28 347 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 UGT1A7Q9HAW7 530 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 UGT1A10Q9HAW8 530 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 UGT1A8Q9HAW9 530 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 SLCO1B3Q9NPD5 702 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 PACSIN2Q9UNF0 486 aaPredicted RBP1.36□□□□□ -2.19
VPS13A-206ENST00000376646 TP53TG5Q9Y2B4 290 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 PRG3Q9Y2Y8 225 aaPredicted RBP1.36□□□□□ -2.19
VPS13A-206ENST00000376646 NSD2O96028 1365 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 PDS5BQ9NTI5 1447 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 CNTNAP1P78357 1384 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 A0A1B0GUA9 196 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 A0A1B0GVI7 797 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 SMCO3A2RU48 225 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 SMCO2A6NFE2 343 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 SGK1O00141 431 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 DLGAP1O14490 977 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 DYNC1I1O14576 645 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 SLC31A2O15432 143 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 SOX15O60248 233 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 CLIC3O95833 236 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 TDGF1P13385 188 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 ZNF43P17038 809 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 TDGF1P3P51864 188 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 ACLYP53396 1101 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 FGF8P55075 233 aaPredicted RBP1.36□□□□□ -2.19
VPS13A-206ENST00000376646 GPX6P59796 221 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 ECH1Q13011 328 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 AQP6Q13520 282 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 IDI1Q13907 227 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 ARHGAP19Q14CB8 494 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 GUCA2BQ16661 112 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 RFX4Q33E94 735 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 ALKBH6Q3KRA9 238 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 CARD17Q5XLA6 110 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 LRRC66Q68CR7 880 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 SASS6Q6UVJ0 657 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 GTPBP8Q8N3Z3 284 aaPredicted RBP1.36□□□□□ -2.19
VPS13A-206ENST00000376646 LINC01555Q8NAE3 123 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 CCDC126Q96EE4 140 aa1.36□□□□□ -2.19
VPS13A-206ENST00000376646 KCTD14Q9BQ13 255 aaPredicted RBP1.36□□□□□ -2.19
VPS13A-206ENST00000376646 HDHD3Q9BSH5 251 aaPredicted RBP1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms