RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 SLC22A23A1A5C7 686 aa11.29□□□□□ -0.6
CLCN6-206ENST00000376496 NPIPA5E9PKD4 350 aa11.29□□□□□ -0.6
CLCN6-206ENST00000376496 TRIM3O75382 744 aaPredicted RBP11.29□□□□□ -0.6
CLCN6-206ENST00000376496 CYB561P49447 251 aa11.29□□□□□ -0.6
CLCN6-206ENST00000376496 TUBA1BP68363 451 aa11.29□□□□□ -0.6
CLCN6-206ENST00000376496 HSF1Q00613 529 aa11.29□□□□□ -0.6
CLCN6-206ENST00000376496 EMC4Q5J8M3 183 aa11.29□□□□□ -0.6
CLCN6-206ENST00000376496 SLC35D3Q5M8T2 416 aa11.29□□□□□ -0.6
CLCN6-206ENST00000376496 CARD17Q5XLA6 110 aa11.29□□□□□ -0.6
CLCN6-206ENST00000376496 H3F3CQ6NXT2 135 aa11.29□□□□□ -0.6
CLCN6-206ENST00000376496 TUBA1AQ71U36 451 aa11.29□□□□□ -0.6
CLCN6-206ENST00000376496 TIGD4Q8IY51 512 aa11.29□□□□□ -0.6
CLCN6-206ENST00000376496 THAP4Q8WY91 577 aa11.29□□□□□ -0.6
CLCN6-206ENST00000376496 ORAI1Q96D31 301 aa11.29□□□□□ -0.6
CLCN6-206ENST00000376496 ADAD1Q96M93 576 aaKnown RBP11.29□□□□□ -0.6
CLCN6-206ENST00000376496 ISYNA1Q9NPH2 558 aa11.29□□□□□ -0.6
CLCN6-206ENST00000376496 LRFN1Q9P244 771 aa11.29□□□□□ -0.6
CLCN6-206ENST00000376496 NPIPA1Q9UND3 350 aa11.29□□□□□ -0.6
CLCN6-206ENST00000376496 PCDHGB6Q9Y5F9 930 aa11.29□□□□□ -0.6
CLCN6-206ENST00000376496 BIDP55957 195 aa11.29□□□□□ -0.6
CLCN6-206ENST00000376496 ACTC1P68032 377 aa11.29□□□□□ -0.6
CLCN6-206ENST00000376496 ACTA1P68133 377 aa11.29□□□□□ -0.6
CLCN6-206ENST00000376496 HNRNPA0Q13151 305 aaKnown RBP11.29□□□□□ -0.6
CLCN6-206ENST00000376496 INAQ16352 499 aa11.29□□□□□ -0.6
CLCN6-206ENST00000376496 ARMC10Q8N2F6 343 aa11.29□□□□□ -0.6
CLCN6-206ENST00000376496 ZNF248Q8NDW4 579 aa11.29□□□□□ -0.6
CLCN6-206ENST00000376496 ADAMTS14Q8WXS8 1223 aa11.29□□□□□ -0.6
CLCN6-206ENST00000376496 PDCD1LG2Q9BQ51 273 aa11.29□□□□□ -0.6
CLCN6-206ENST00000376496 NDEL1Q9GZM8 345 aa11.29□□□□□ -0.6
CLCN6-206ENST00000376496 PLGRKTQ9HBL7 147 aa11.29□□□□□ -0.6
CLCN6-206ENST00000376496 AKIP1Q9NQ31 210 aa11.29□□□□□ -0.6
CLCN6-206ENST00000376496 ALKBH4Q9NXW9 302 aa11.29□□□□□ -0.6
CLCN6-206ENST00000376496 KCNG2Q9UJ96 466 aa11.29□□□□□ -0.6
CLCN6-206ENST00000376496 COA3Q9Y2R0 106 aaPredicted RBP11.29□□□□□ -0.6
CLCN6-206ENST00000376496 SULT2B1O00204 365 aa11.28□□□□□ -0.6
CLCN6-206ENST00000376496 TRAPPC6AO75865 159 aa11.28□□□□□ -0.6
CLCN6-206ENST00000376496 WNT11O96014 354 aa11.28□□□□□ -0.6
CLCN6-206ENST00000376496 STARP49675 285 aa11.28□□□□□ -0.6
CLCN6-206ENST00000376496 DLX5P56178 289 aa11.28□□□□□ -0.6
CLCN6-206ENST00000376496 RAB43Q86YS6 212 aa11.28□□□□□ -0.6
CLCN6-206ENST00000376496 UBQLNLQ8IYU4 475 aa11.28□□□□□ -0.6
CLCN6-206ENST00000376496 MFSD4AQ8N468 514 aa11.28□□□□□ -0.6
CLCN6-206ENST00000376496 THEM6Q8WUY1 208 aa11.28□□□□□ -0.6
CLCN6-206ENST00000376496 ASB10Q8WXI3 467 aa11.28□□□□□ -0.6
CLCN6-206ENST00000376496 NSMAFQ92636 917 aa11.28□□□□□ -0.6
CLCN6-206ENST00000376496 GHSRQ92847 366 aa11.28□□□□□ -0.6
CLCN6-206ENST00000376496 ZNF775Q96BV0 537 aaPredicted RBP11.28□□□□□ -0.6
CLCN6-206ENST00000376496 KCTD7Q96MP8 289 aa11.28□□□□□ -0.6
CLCN6-206ENST00000376496 POTEKPQ9BYX7 375 aa11.28□□□□□ -0.6
CLCN6-206ENST00000376496 INPP5EQ9NRR6 644 aa11.28□□□□□ -0.6
CLCN6-206ENST00000376496 ARGFXA6NJG6 315 aa11.28□□□□□ -0.6
CLCN6-206ENST00000376496 LRRC3CA6NJW4 275 aa11.28□□□□□ -0.6
CLCN6-206ENST00000376496 LRP3O75074 770 aa11.28□□□□□ -0.6
CLCN6-206ENST00000376496 RBMS1P29558 406 aaKnown RBP11.28□□□□□ -0.6
CLCN6-206ENST00000376496 NOVA1P51513 510 aaKnown RBP11.28□□□□□ -0.6
CLCN6-206ENST00000376496 ACSM1Q08AH1 577 aa11.28□□□□□ -0.6
CLCN6-206ENST00000376496 SELENBP1Q13228 472 aa11.28□□□□□ -0.6
CLCN6-206ENST00000376496 CAMK2DQ13557 499 aa11.28□□□□□ -0.6
CLCN6-206ENST00000376496 WIPI1Q5MNZ9 446 aaPredicted RBP11.28□□□□□ -0.6
CLCN6-206ENST00000376496 C5orf46Q6UWT4 87 aa11.28□□□□□ -0.6
CLCN6-206ENST00000376496 GTPBP8Q8N3Z3 284 aaPredicted RBP11.28□□□□□ -0.6
CLCN6-206ENST00000376496 SGCZQ96LD1 299 aa11.28□□□□□ -0.6
CLCN6-206ENST00000376496 UCN2Q96RP3 112 aa11.28□□□□□ -0.6
CLCN6-206ENST00000376496 SACM1LQ9NTJ5 587 aa11.28□□□□□ -0.6
CLCN6-206ENST00000376496 MRPL22Q9NWU5 206 aaKnown RBP11.28□□□□□ -0.6
CLCN6-206ENST00000376496 ST6GALNAC2Q9UJ37 374 aa11.28□□□□□ -0.6
CLCN6-206ENST00000376496 PHF3Q92576 2039 aaKnown RBP11.27□□□□□ -0.6
CLCN6-206ENST00000376496 LAMA5O15230 3695 aa11.27□□□□□ -0.6
CLCN6-206ENST00000376496 hCG_2014768A0A024R1R8 64 aa11.27□□□□□ -0.6
CLCN6-206ENST00000376496 SEC14L5O43304 696 aa11.27□□□□□ -0.6
CLCN6-206ENST00000376496 P2RY4P51582 365 aa11.27□□□□□ -0.6
CLCN6-206ENST00000376496 DSCR4P56555 118 aaPredicted RBP11.27□□□□□ -0.6
CLCN6-206ENST00000376496 CLDN20P56880 219 aa11.27□□□□□ -0.6
CLCN6-206ENST00000376496 NANOS3P60323 173 aaKnown RBP11.27□□□□□ -0.6
CLCN6-206ENST00000376496 ODF4Q2M2E3 257 aa11.27□□□□□ -0.6
CLCN6-206ENST00000376496 ZNF829Q3KNS6 432 aaPredicted RBP11.27□□□□□ -0.6
CLCN6-206ENST00000376496 CDONQ4KMG0 1287 aa11.27□□□□□ -0.6
CLCN6-206ENST00000376496 ABHD17BQ5VST6 288 aa11.27□□□□□ -0.6
CLCN6-206ENST00000376496 TMEM225Q6GV28 225 aa11.27□□□□□ -0.6
CLCN6-206ENST00000376496 C16orf87Q6PH81 154 aa11.27□□□□□ -0.6
CLCN6-206ENST00000376496 SLC16A9Q7RTY1 509 aa11.27□□□□□ -0.6
CLCN6-206ENST00000376496 SYT9Q86SS6 491 aa11.27□□□□□ -0.6
CLCN6-206ENST00000376496 OR14L1PQ8NHC6 308 aa11.27□□□□□ -0.6
CLCN6-206ENST00000376496 PGLYRP3Q96LB9 341 aa11.27□□□□□ -0.6
CLCN6-206ENST00000376496 IKZF2Q9UKS7 526 aa11.27□□□□□ -0.6
CLCN6-206ENST00000376496 NOX1Q9Y5S8 564 aa11.27□□□□□ -0.6
CLCN6-206ENST00000376496 PRRC2CQ9Y520 2896 aaKnown RBP11.27□□□□□ -0.6
CLCN6-206ENST00000376496 IGLV1-36A0A0B4J1U3 117 aa11.27□□□□□ -0.61
CLCN6-206ENST00000376496 TRDV1A0A1B0GX56 115 aa11.27□□□□□ -0.61
CLCN6-206ENST00000376496 CLDN25C9JDP6 229 aa11.27□□□□□ -0.61
CLCN6-206ENST00000376496 ZNF593O00488 134 aaPredicted RBP11.27□□□□□ -0.61
CLCN6-206ENST00000376496 TNFSF11O14788 317 aa11.27□□□□□ -0.61
CLCN6-206ENST00000376496 NKX2-8O15522 239 aa11.27□□□□□ -0.61
CLCN6-206ENST00000376496 RGS5O15539 181 aa11.27□□□□□ -0.61
CLCN6-206ENST00000376496 WDPCPO95876 746 aa11.27□□□□□ -0.61
CLCN6-206ENST00000376496 SPARCP09486 303 aa11.27□□□□□ -0.61
CLCN6-206ENST00000376496 WT1P19544 449 aaPredicted RBP11.27□□□□□ -0.61
CLCN6-206ENST00000376496 EDNRAP25101 427 aa11.27□□□□□ -0.61
CLCN6-206ENST00000376496 NBL1P41271 181 aa11.27□□□□□ -0.61
CLCN6-206ENST00000376496 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.27□□□□□ -0.612e-9■■□□□ 11.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms