RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 AP1ARQ63HQ0 302 aa14.79□□□□□ -0.04
H2AFX-201ENST00000375167 ZDHHC16Q969W1 377 aa14.79□□□□□ -0.04
H2AFX-201ENST00000375167 KTI12Q96EK9 354 aaPredicted RBP14.79□□□□□ -0.04
H2AFX-201ENST00000375167 ELAC2Q9BQ52 826 aaKnown RBP14.79□□□□□ -0.04
H2AFX-201ENST00000375167 OR11A1Q9GZK7 315 aa14.79□□□□□ -0.04
H2AFX-201ENST00000375167 NMUR2Q9GZQ4 415 aa14.79□□□□□ -0.04
H2AFX-201ENST00000375167 ZNF350Q9GZX5 532 aa14.79□□□□□ -0.04
H2AFX-201ENST00000375167 PAIP1Q9H074 479 aaKnown RBP14.79□□□□□ -0.04
H2AFX-201ENST00000375167 TPT1P8Q9HAU6 139 aa14.79□□□□□ -0.04
H2AFX-201ENST00000375167 CTPS2Q9NRF8 586 aa14.79□□□□□ -0.04
H2AFX-201ENST00000375167 POLE3Q9NRF9 147 aa14.79□□□□□ -0.04
H2AFX-201ENST00000375167 TNFRSF19Q9NS68 423 aa14.79□□□□□ -0.04
H2AFX-201ENST00000375167 AURKAIP1Q9NWT8 199 aaPredicted RBP14.79□□□□□ -0.04
H2AFX-201ENST00000375167 MYEF2Q9P2K5 600 aaKnown RBP14.79□□□□□ -0.04
H2AFX-201ENST00000375167 TRAPPC4Q9Y296 219 aa14.79□□□□□ -0.04
H2AFX-201ENST00000375167 A0A096LPI6 279 aa14.78□□□□□ -0.04
H2AFX-201ENST00000375167 IGHV1-69-2A0A0G2JMI3 117 aa14.78□□□□□ -0.04
H2AFX-201ENST00000375167 MDFIC2A0A1B0GVS7 189 aa14.78□□□□□ -0.04
H2AFX-201ENST00000375167 SRRM5B3KS81 715 aa14.78□□□□□ -0.04
H2AFX-201ENST00000375167 SNX3O60493 162 aa14.78□□□□□ -0.04
H2AFX-201ENST00000375167 FCMRO60667 390 aa14.78□□□□□ -0.04
H2AFX-201ENST00000375167 GLRXP35754 106 aa14.78□□□□□ -0.04
H2AFX-201ENST00000375167 CRYBB2P43320 205 aa14.78□□□□□ -0.04
H2AFX-201ENST00000375167 SKP2Q13309 424 aa14.78□□□□□ -0.04
H2AFX-201ENST00000375167 NKPD1Q17RQ9 610 aa14.78□□□□□ -0.04
H2AFX-201ENST00000375167 PCGF3Q3KNV8 242 aa14.78□□□□□ -0.04
H2AFX-201ENST00000375167 COX20Q5RI15 118 aa14.78□□□□□ -0.04
H2AFX-201ENST00000375167 LRP11Q86VZ4 500 aa14.78□□□□□ -0.04
H2AFX-201ENST00000375167 JAZF1Q86VZ6 243 aa14.78□□□□□ -0.04
H2AFX-201ENST00000375167 PARP8Q8N3A8 854 aa14.78□□□□□ -0.04
H2AFX-201ENST00000375167 PNPT1Q8TCS8 783 aaKnown RBP14.78□□□□□ -0.04
H2AFX-201ENST00000375167 TSPEARQ8WU66 669 aa14.78□□□□□ -0.04
H2AFX-201ENST00000375167 ROPN1LQ96C74 230 aa14.78□□□□□ -0.04
H2AFX-201ENST00000375167 ZNF385AQ96PM9 386 aaKnown RBP14.78□□□□□ -0.04
H2AFX-201ENST00000375167 FN3KRPQ9HA64 309 aa14.78□□□□□ -0.04
H2AFX-201ENST00000375167 MMP26Q9NRE1 261 aa14.78□□□□□ -0.04
H2AFX-201ENST00000375167 UBAP1Q9NZ09 502 aa14.78□□□□□ -0.04
H2AFX-201ENST00000375167 DUSP13Q9UII6 198 aa14.78□□□□□ -0.04
H2AFX-201ENST00000375167 ISPDA4D126 451 aa14.77□□□□□ -0.04
H2AFX-201ENST00000375167 TRAF3IP2O43734 574 aaPredicted RBP14.77□□□□□ -0.04
H2AFX-201ENST00000375167 DNAJA2O60884 412 aa14.77□□□□□ -0.04
H2AFX-201ENST00000375167 DCTN3O75935 186 aa14.77□□□□□ -0.04
H2AFX-201ENST00000375167 MVDP53602 400 aa14.77□□□□□ -0.04
H2AFX-201ENST00000375167 PROK1P58294 105 aa14.77□□□□□ -0.04
H2AFX-201ENST00000375167 SF3A3Q12874 501 aaKnown RBP eCLIP14.77□□□□□ -0.04
H2AFX-201ENST00000375167 DOC2BQ14184 412 aa14.77□□□□□ -0.04
H2AFX-201ENST00000375167 GPR68Q15743 365 aa14.77□□□□□ -0.04
H2AFX-201ENST00000375167 GTDC1Q4AE62 458 aa14.77□□□□□ -0.04
H2AFX-201ENST00000375167 LRIF1Q5T3J3 769 aa14.77□□□□□ -0.04
H2AFX-201ENST00000375167 TMEM154Q6P9G4 183 aa14.77□□□□□ -0.04
H2AFX-201ENST00000375167 OR9K2Q8NGE7 335 aa14.77□□□□□ -0.04
H2AFX-201ENST00000375167 OR52E2Q8NGJ4 325 aa14.77□□□□□ -0.04
H2AFX-201ENST00000375167 OIT3Q8WWZ8 545 aa14.77□□□□□ -0.04
H2AFX-201ENST00000375167 SGCDQ92629 289 aa14.77□□□□□ -0.04
H2AFX-201ENST00000375167 TRNT1Q96Q11 434 aaKnown RBP14.77□□□□□ -0.04
H2AFX-201ENST00000375167 CCDC106Q9BWC9 280 aa14.77□□□□□ -0.04
H2AFX-201ENST00000375167 LAT2Q9GZY6 243 aa14.77□□□□□ -0.04
H2AFX-201ENST00000375167 MKLN1Q9UL63 735 aa14.77□□□□□ -0.04
H2AFX-201ENST00000375167 FZR1Q9UM11 496 aa14.77□□□□□ -0.04
H2AFX-201ENST00000375167 ARL2BPQ9Y2Y0 163 aa14.77□□□□□ -0.04
H2AFX-201ENST00000375167 IGHV3OR16-10A0A075B7F0 116 aa14.76□□□□□ -0.05
H2AFX-201ENST00000375167 PRAMEF27A3QJZ7 478 aa14.76□□□□□ -0.05
H2AFX-201ENST00000375167 AGAP5A6NIR3 686 aa14.76□□□□□ -0.05
H2AFX-201ENST00000375167 CLIC1O00299 241 aa14.76□□□□□ -0.05
H2AFX-201ENST00000375167 IGHV4-38-2P0DP08 117 aa14.76□□□□□ -0.05
H2AFX-201ENST00000375167 ZNF12P17014 697 aa14.76□□□□□ -0.05
H2AFX-201ENST00000375167 HOXB9P17482 250 aaPredicted RBP14.76□□□□□ -0.05
H2AFX-201ENST00000375167 DRD4P21917 467 aa14.76□□□□□ -0.05
H2AFX-201ENST00000375167 FUT5Q11128 374 aa14.76□□□□□ -0.05
H2AFX-201ENST00000375167 ZNF141Q15928 474 aa14.76□□□□□ -0.05
H2AFX-201ENST00000375167 HFEQ30201 348 aa14.76□□□□□ -0.05
H2AFX-201ENST00000375167 GPAT3Q53EU6 434 aa14.76□□□□□ -0.05
H2AFX-201ENST00000375167 PAGE3Q5JUK9 113 aa14.76□□□□□ -0.05
H2AFX-201ENST00000375167 CCBE1Q6UXH8 406 aaPredicted RBP14.76□□□□□ -0.05
H2AFX-201ENST00000375167 MDP1Q86V88 176 aa14.76□□□□□ -0.05
H2AFX-201ENST00000375167 ZIC4Q8N9L1 334 aa14.76□□□□□ -0.05
H2AFX-201ENST00000375167 LINC01006Q8NI28 216 aa14.76□□□□□ -0.05
H2AFX-201ENST00000375167 C10orf82Q8WW14 230 aa14.76□□□□□ -0.05
H2AFX-201ENST00000375167 RAD21L1Q9H4I0 556 aa14.76□□□□□ -0.05
H2AFX-201ENST00000375167 MARCH7Q9H992 704 aa14.76□□□□□ -0.05
H2AFX-201ENST00000375167 THUMPD1Q9NXG2 353 aaKnown RBP14.76□□□□□ -0.05
H2AFX-201ENST00000375167 SLAMF8Q9P0V8 285 aa14.76□□□□□ -0.05
H2AFX-201ENST00000375167 GPR160Q9UJ42 338 aa14.76□□□□□ -0.05
H2AFX-201ENST00000375167 NDUFAF1Q9Y375 327 aa14.76□□□□□ -0.05
H2AFX-201ENST00000375167 WDR45Q9Y484 360 aa14.76□□□□□ -0.05
H2AFX-201ENST00000375167 SOX21Q9Y651 276 aaPredicted RBP14.76□□□□□ -0.05
H2AFX-201ENST00000375167 C17orf100A8MU93 164 aa14.75□□□□□ -0.05
H2AFX-201ENST00000375167 ANGPT2O15123 496 aa14.75□□□□□ -0.05
H2AFX-201ENST00000375167 UGT2B17O75795 530 aa14.75□□□□□ -0.05
H2AFX-201ENST00000375167 IGHMP01871 453 aa14.75□□□□□ -0.05
H2AFX-201ENST00000375167 CRATP43155 626 aa14.75□□□□□ -0.05
H2AFX-201ENST00000375167 CAPZA2P47755 286 aa14.75□□□□□ -0.05
H2AFX-201ENST00000375167 RPL15P61313 204 aaKnown RBP14.75□□□□□ -0.05
H2AFX-201ENST00000375167 HPCAP84074 193 aa14.75□□□□□ -0.05
H2AFX-201ENST00000375167 COL10A1Q03692 680 aa14.75□□□□□ -0.05
H2AFX-201ENST00000375167 TRMT5Q32P41 509 aaKnown RBP14.75□□□□□ -0.05
H2AFX-201ENST00000375167 ALKBH6Q3KRA9 238 aa14.75□□□□□ -0.05
H2AFX-201ENST00000375167 PDZK1Q5T2W1 519 aa14.75□□□□□ -0.05
H2AFX-201ENST00000375167 TYW3Q6IPR3 259 aaKnown RBP14.75□□□□□ -0.05
H2AFX-201ENST00000375167 PAQR6Q6TCH4 344 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms