RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 SNX11Q9Y5W9 270 aa14.19□□□□□ -0.14
COL5A1-201ENST00000371817 SSSCA1O60232 199 aa14.19□□□□□ -0.14
COL5A1-201ENST00000371817 PGGT1BP53609 377 aa14.19□□□□□ -0.14
COL5A1-201ENST00000371817 NSDHLQ15738 373 aa14.19□□□□□ -0.14
COL5A1-201ENST00000371817 Q499Y3 187 aa14.19□□□□□ -0.14
COL5A1-201ENST00000371817 DGAT2L6Q6ZPD8 337 aa14.19□□□□□ -0.14
COL5A1-201ENST00000371817 OR2M7Q8NG81 312 aa14.19□□□□□ -0.14
COL5A1-201ENST00000371817 OR2D3Q8NGH3 330 aa14.19□□□□□ -0.14
COL5A1-201ENST00000371817 OR51A4Q8NGJ6 313 aa14.19□□□□□ -0.14
COL5A1-201ENST00000371817 APH1AQ96BI3 265 aa14.19□□□□□ -0.14
COL5A1-201ENST00000371817 LYSMD1Q96S90 227 aa14.19□□□□□ -0.14
COL5A1-201ENST00000371817 MMP26Q9NRE1 261 aa14.19□□□□□ -0.14
COL5A1-201ENST00000371817 DAPP51397 102 aa14.18□□□□□ -0.14
COL5A1-201ENST00000371817 CRMP1Q14194 572 aa14.18□□□□□ -0.14
COL5A1-201ENST00000371817 OR7E24Q6IFN5 339 aa14.18□□□□□ -0.14
COL5A1-201ENST00000371817 TAS1R3Q7RTX0 852 aa14.18□□□□□ -0.14
COL5A1-201ENST00000371817 LSMEM1Q8N8F7 131 aa14.18□□□□□ -0.14
COL5A1-201ENST00000371817 GSX1Q9H4S2 264 aaPredicted RBP14.18□□□□□ -0.14
COL5A1-201ENST00000371817 OCEL1Q9H607 264 aa14.18□□□□□ -0.14
COL5A1-201ENST00000371817 PCDHGA9Q9Y5G4 932 aaKnown RBP14.18□□□□□ -0.14
COL5A1-201ENST00000371817 DOCK10Q96BY6 2186 aa14.18□□□□□ -0.14
COL5A1-201ENST00000371817 TRAV34A0A0B4J273 112 aa14.18□□□□□ -0.14
COL5A1-201ENST00000371817 SLC22A24Q8N4F4 322 aa14.18□□□□□ -0.14
COL5A1-201ENST00000371817 EVA1AQ9H8M9 152 aa14.18□□□□□ -0.14
COL5A1-201ENST00000371817 TAS2R5Q9NYW4 299 aa14.18□□□□□ -0.14
COL5A1-201ENST00000371817 SNHG28P0DPA3 235 aa14.18□□□□□ -0.14
COL5A1-201ENST00000371817 CD37P11049 281 aa14.18□□□□□ -0.14
COL5A1-201ENST00000371817 CLDN20P56880 219 aa14.18□□□□□ -0.14
COL5A1-201ENST00000371817 ZNF805Q5CZA5 627 aa14.18□□□□□ -0.14
COL5A1-201ENST00000371817 ETV3LQ6ZN32 361 aa14.18□□□□□ -0.14
COL5A1-201ENST00000371817 CDRT4Q8N9R6 151 aa14.18□□□□□ -0.14
COL5A1-201ENST00000371817 OR5AR1Q8NGP9 310 aa14.18□□□□□ -0.14
COL5A1-201ENST00000371817 FAM186AA6NE01 2351 aa14.18□□□□□ -0.14
COL5A1-201ENST00000371817 SHPRHQ149N8 1683 aa14.18□□□□□ -0.14
COL5A1-201ENST00000371817 CBLL1Q75N03 491 aa14.18□□□□□ -0.14
COL5A1-201ENST00000371817 ZNF485Q8NCK3 441 aa14.18□□□□□ -0.14
COL5A1-201ENST00000371817 OR6K3Q8NGY3 331 aa14.18□□□□□ -0.14
COL5A1-201ENST00000371817 MS4A10Q96PG2 267 aa14.18□□□□□ -0.14
COL5A1-201ENST00000371817 ACTR3CQ9C0K3 210 aaPredicted RBP14.18□□□□□ -0.14
COL5A1-201ENST00000371817 ENKD1Q9H0I2 346 aa14.18□□□□□ -0.14
COL5A1-201ENST00000371817 CYB5R1Q9UHQ9 305 aa14.18□□□□□ -0.14
COL5A1-201ENST00000371817 MRPS17Q9Y2R5 130 aaKnown RBP14.18□□□□□ -0.14
COL5A1-201ENST00000371817 PMCHP20382 165 aa14.18□□□□□ -0.14
COL5A1-201ENST00000371817 ZNF776Q68DI1 518 aaPredicted RBP14.18□□□□□ -0.14
COL5A1-201ENST00000371817 SIRT3Q9NTG7 399 aaPredicted RBP14.18□□□□□ -0.14
COL5A1-201ENST00000371817 TRAPPC2LQ9UL33 140 aa14.18□□□□□ -0.14
COL5A1-201ENST00000371817 ARFGEF2Q9Y6D5 1785 aa14.18□□□□□ -0.14
COL5A1-201ENST00000371817 ADRA2CP18825 462 aa14.18□□□□□ -0.14
COL5A1-201ENST00000371817 HTR1FP30939 366 aa14.18□□□□□ -0.14
COL5A1-201ENST00000371817 C5AR2Q9P296 337 aa14.18□□□□□ -0.14
COL5A1-201ENST00000371817 TMEM88BA6NKF7 163 aa14.17□□□□□ -0.14
COL5A1-201ENST00000371817 H3BML4 177 aa14.17□□□□□ -0.14
COL5A1-201ENST00000371817 TBPP20226 339 aa14.17□□□□□ -0.14
COL5A1-201ENST00000371817 PRR27Q6MZM9 219 aa14.17□□□□□ -0.14
COL5A1-201ENST00000371817 FAM3DQ96BQ1 224 aa14.17□□□□□ -0.14
COL5A1-201ENST00000371817 TRBV4-1A0A0J9YWV2 114 aa14.17□□□□□ -0.14
COL5A1-201ENST00000371817 KDM4EB2RXH2 506 aaPredicted RBP14.17□□□□□ -0.14
COL5A1-201ENST00000371817 E5RGE8 158 aa14.17□□□□□ -0.14
COL5A1-201ENST00000371817 ARNTLO00327 626 aa14.17□□□□□ -0.14
COL5A1-201ENST00000371817 FAM69BQ5VUD6 431 aa14.17□□□□□ -0.14
COL5A1-201ENST00000371817 NSG2Q9Y328 171 aa14.17□□□□□ -0.14
COL5A1-201ENST00000371817 A0A1W2PRU2 124 aa14.17□□□□□ -0.14
COL5A1-201ENST00000371817 FAM227AF5H4B4 570 aa14.17□□□□□ -0.14
COL5A1-201ENST00000371817 AP4M1O00189 453 aa14.17□□□□□ -0.14
COL5A1-201ENST00000371817 SULT1A3P0DMM9 295 aa14.17□□□□□ -0.14
COL5A1-201ENST00000371817 SULT1A4P0DMN0 295 aa14.17□□□□□ -0.14
COL5A1-201ENST00000371817 TIMP2P16035 220 aa14.17□□□□□ -0.14
COL5A1-201ENST00000371817 FCGR2CP31995 323 aa14.17□□□□□ -0.14
COL5A1-201ENST00000371817 ARRB1P49407 418 aaPredicted RBP14.17□□□□□ -0.14
COL5A1-201ENST00000371817 TEKQ02763 1124 aa14.17□□□□□ -0.14
COL5A1-201ENST00000371817 CLMPQ9H6B4 373 aa14.17□□□□□ -0.14
COL5A1-201ENST00000371817 SSUH2Q9Y2M2 353 aa14.17□□□□□ -0.14
COL5A1-201ENST00000371817 DIP2BQ9P265 1576 aa14.17□□□□□ -0.14
COL5A1-201ENST00000371817 NKX2-1P43699 371 aaPredicted RBP14.17□□□□□ -0.14
COL5A1-201ENST00000371817 CSN1S1P47710 185 aa14.17□□□□□ -0.14
COL5A1-201ENST00000371817 PCBD1P61457 104 aa14.17□□□□□ -0.14
COL5A1-201ENST00000371817 CXCL9Q07325 125 aa14.17□□□□□ -0.14
COL5A1-201ENST00000371817 VRK3Q8IV63 474 aa14.17□□□□□ -0.14
COL5A1-201ENST00000371817 PGBD5Q8N414 524 aa14.17□□□□□ -0.14
COL5A1-201ENST00000371817 NKX2-4Q9H2Z4 354 aa14.17□□□□□ -0.14
COL5A1-201ENST00000371817 HEYLQ9NQ87 328 aaPredicted RBP14.17□□□□□ -0.14
COL5A1-201ENST00000371817 HSD17B7P56937 341 aa14.17□□□□□ -0.14
COL5A1-201ENST00000371817 B2MP61769 119 aa14.17□□□□□ -0.14
COL5A1-201ENST00000371817 RPS21P63220 83 aaKnown RBP14.17□□□□□ -0.14
COL5A1-201ENST00000371817 GLYATL3Q5SZD4 288 aa14.17□□□□□ -0.14
COL5A1-201ENST00000371817 THNSL2Q86YJ6 484 aa14.17□□□□□ -0.14
COL5A1-201ENST00000371817 PIGCQ92535 297 aa14.17□□□□□ -0.14
COL5A1-201ENST00000371817 MARCH4Q9P2E8 410 aaPredicted RBP14.17□□□□□ -0.14
COL5A1-201ENST00000371817 SPATA31A1Q5TZJ5 1347 aa14.17□□□□□ -0.14
COL5A1-201ENST00000371817 IGLV3-22A0A075B6J6 115 aa14.17□□□□□ -0.14
COL5A1-201ENST00000371817 DBX1A6NMT0 343 aa14.17□□□□□ -0.14
COL5A1-201ENST00000371817 PKIAP61925 76 aa14.17□□□□□ -0.14
COL5A1-201ENST00000371817 INCA1Q0VD86 236 aa14.17□□□□□ -0.14
COL5A1-201ENST00000371817 SMUG1Q53HV7 270 aa14.17□□□□□ -0.14
COL5A1-201ENST00000371817 CLLU1Q5K131 121 aa14.17□□□□□ -0.14
COL5A1-201ENST00000371817 PNPLA1Q8N8W4 532 aa14.17□□□□□ -0.14
COL5A1-201ENST00000371817 ZMAT3Q9HA38 289 aaKnown RBP14.17□□□□□ -0.14
COL5A1-201ENST00000371817 PLEKHA2Q9HB19 425 aa14.17□□□□□ -0.14
COL5A1-201ENST00000371817 RHOFQ9HBH0 211 aa14.17□□□□□ -0.14
COL5A1-201ENST00000371817 ZNF443Q9Y2A4 671 aaPredicted RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms